Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

Click here to switch to the map view.

The map label for this gene is 89055943

Identifier: 89055943

GI number: 89055943

Start: 3500915

End: 3501211

Strand: Direct

Name: 89055943

Synonym: Jann_3452

Alternate gene names: NA

Gene position: 3500915-3501211 (Clockwise)

Preceding gene: 89055942

Following gene: 89055944

Centisome position: 81.08

GC content: 60.61

Gene sequence:

>297_bases
ATGGCGCGCTCCACGCTAAGCCCCGTCAGCACGCACCTTGACCTCACCCATTGCATACACCGACGTATCTCCATGATCGA
AACCAAAATCCGCAAAGTCGGCAATTCAGCCGTCGTCACGCTTTCGTCCGAGATGCTCGCCGTGCTCGATGCCAAACCCG
GCGACGCTTTGTTCGTGACCCGCTCCGATGACGGGGCGCTCAAACTCATGGCCCATGACCCCGAGCTTCAAGCGGCTCTC
GCAGCCGCCGAAGAGGTGATGGACGAGAACCGGGATCTCCTTCAGGCGCTTGCGTGA

Upstream 100 bases:

>100_bases
TCTGGCCACGGCTTGGTGCTCCGCCCGTTAAGTCCCTCAAGCTTGGCCACTATAAACTGCCAGAGAACACCTCGGCGGAT
CGCCGATCCAAGGCCCGACG

Downstream 100 bases:

>100_bases
GCTGGGTCTGGGTCCCCGTCCAGACCCTCTACGTCGTCCATGACCGCCAGATCGCCCGCCACGGTGGTGCGCCGGGGGTC
AGAGACATTGCGCGTCTGGC

Product: transcriptional regulator/antitoxin, MazE

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MARSTLSPVSTHLDLTHCIHRRISMIETKIRKVGNSAVVTLSSEMLAVLDAKPGDALFVTRSDDGALKLMAHDPELQAAL
AAAEEVMDENRDLLQALA

Sequences:

>Translated_98_residues
MARSTLSPVSTHLDLTHCIHRRISMIETKIRKVGNSAVVTLSSEMLAVLDAKPGDALFVTRSDDGALKLMAHDPELQAAL
AAAEEVMDENRDLLQALA
>Mature_97_residues
ARSTLSPVSTHLDLTHCIHRRISMIETKIRKVGNSAVVTLSSEMLAVLDAKPGDALFVTRSDDGALKLMAHDPELQAALA
AAEEVMDENRDLLQALA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10594; Mature: 10463

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARSTLSPVSTHLDLTHCIHRRISMIETKIRKVGNSAVVTLSSEMLAVLDAKPGDALFVT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCCCEEEEE
RSDDGALKLMAHDPELQAALAAAEEVMDENRDLLQALA
ECCCCEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHCC
>Mature Secondary Structure 
ARSTLSPVSTHLDLTHCIHRRISMIETKIRKVGNSAVVTLSSEMLAVLDAKPGDALFVT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCCCEEEEE
RSDDGALKLMAHDPELQAALAAAEEVMDENRDLLQALA
ECCCCEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA