Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055932

Identifier: 89055932

GI number: 89055932

Start: 3486925

End: 3488763

Strand: Direct

Name: 89055932

Synonym: Jann_3441

Alternate gene names: NA

Gene position: 3486925-3488763 (Clockwise)

Preceding gene: 89055930

Following gene: 89055933

Centisome position: 80.75

GC content: 61.07

Gene sequence:

>1839_bases
ATGGGTGTATTCCGTCGCGAGGACCTCTGGCCGATTGGGTTTATGATTAGGAGAGACGGCATGTTTGGCCTCTTCCAGAA
AATGCAGACGTCCGCCGGGGCCATCGCCGCCCGTCTGGCGCCACGCCAATTTATGCGGCGCGAAGAGGGGACGATCACCG
CGTTCGCCACGATGTTGTTCATATTGATGGTCGGCGCCAGCGGCATCGCCATTGACGTGATGCGGTATGAAACCCAGCGC
TCGCAACTTCAGTACACTTTGGACCGCGCCGTGCTGGCAGCGGCCTCCCTGACCCAGCCCTACGACCCGGAAGGCGTCGT
GCGCGACTATTTCGCAATCGCGGGCATTGACGGCTACCGCCTGGATGTGCGCGTCGAGGAAGGCCTGAACTTCCGCCGCG
TGCATGCCTATGCGGAGTTGGAAGTGCGCTCTATCTTCATGCAGATGTTCGGCGTTCGCGCCATGACCTCTCCCGCCATC
GGCGCGGCCGAGGAACGGGTGCGGCGGATCGAAGTGTCCATGGTTCTCGATATCTCTGGATCCATGGGGGAAAACAACCG
CATGACCAACATGCGGCCTGCCGCCCGCGAGTTCGTGACCGAGGTGCTGAGCGCCAACGAAAACGTCAATAACGAGCTAC
TCGTTTCGGTGTCCATTGTGCCCTATAACGGGCGCGTGAACGGCGGCGACCTGATCGAAAGCGTGTTCACCTATGACGAT
CTGCACAGCGAGTCCAACTGCACGCGGTTCGCGGAGGCCGACTTCACATCGACAGCCATTGACCCCGCGGTTCCCCTGCA
GCGGATCGCCCATTGGGATCGCGGCAATGAAGAGGAAGACGAGTCCTTTCAGTGGGCCCATTGTCAGACCGATCAATACG
GGGCGATCCTGCCCTGGCAGCATACGGAGGCTGCGCTGCACGCCCATATCGACAGCCTCAACACCGGCGGGTGGACAGCG
ATTGACCTTGGCATGAATTGGGCCGTGGGCCTGCTGGATCCCGCCGCTGCGCCGGCGCTGACCGGGCTGATCGCGTCAGG
CCATGTGCACCCGGAATTCTCGGACCGTCCCGCGCCTTACCGCGACGGCGATCGGGCCACAACGATCGACGATGAGACGA
TCAAGGTGGTCGTGCTGATGACGGATGGTGACAACACCAGACAATATGATCTGCGCGATATCTACGACAGCGCCGGTCGC
TATGTGGGCTTCCGCGAGGGGTATGCACCGATCTTCCGCAACACCTCCACCGGCCAGTATTCTATCTGGTGGGAGGATCA
GGGCGCATTCTGGATCCCAACGGGCAATACTCGTGATCCTGGCGGCTCCTGGCAAGCTCAGCCTGACGGCGGGTGGAGCA
GATATGGCATGACCGCCCTCGAATTCACCGAAGATCGGGCCAATGCGTTCGATCCGGCCGAGGCTGGCAATGGCGAAGTC
CTTCTCTGGGCTGACCTCTTTTCCGACCACACGGCCGGATACATTGCCGCAGAATGGTTCCATGCGCCCGCCGACGAGTC
GGAGCAGTGGGATTTTTACAATCAGCTCGCCGAGAACCCGAGCCACAACTACATCGGTTGGGATTCCGATGGCGTGCGCC
CGGACGGTGTGGTCGGCCAAAGTCAGGCAGACACCAACCTGATGGCCATTTGCGACGTGGCCAATGCGGCGGGCATCATT
GTCTATGCCATCGGCTTTGAAGCGCCGGATCGTGGCCAGCGGGTCATGGAGCATTGCGCGAGCGTTGACGCCAACTACTT
TGACGTTGAGGGCCGCGAAATCTCGGAGGCATTCGCATCCATCGCCCGGTCGATCAACCAGCTGCGACTGATCCAATGA

Upstream 100 bases:

>100_bases
ATCAGGCACAGACGGCCCCAAGCCGAGCGAAAGAACCCGGTTCCTCCATGCTCCCGCCCCATTTCTGCCTTGCTTTCAGA
TGACAAGGTCCCTCGGTGCC

Downstream 100 bases:

>100_bases
TGAGGTCTCTTCCCCACACCCTACGGGCCTTCTGGAGGGACGAGACCGCCACGGCGACGCTGGAAATGGTCATCGTCTTC
CCGCTGATGATGATTGTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 612; Mature: 611

Protein sequence:

>612_residues
MGVFRREDLWPIGFMIRRDGMFGLFQKMQTSAGAIAARLAPRQFMRREEGTITAFATMLFILMVGASGIAIDVMRYETQR
SQLQYTLDRAVLAAASLTQPYDPEGVVRDYFAIAGIDGYRLDVRVEEGLNFRRVHAYAELEVRSIFMQMFGVRAMTSPAI
GAAEERVRRIEVSMVLDISGSMGENNRMTNMRPAAREFVTEVLSANENVNNELLVSVSIVPYNGRVNGGDLIESVFTYDD
LHSESNCTRFAEADFTSTAIDPAVPLQRIAHWDRGNEEEDESFQWAHCQTDQYGAILPWQHTEAALHAHIDSLNTGGWTA
IDLGMNWAVGLLDPAAAPALTGLIASGHVHPEFSDRPAPYRDGDRATTIDDETIKVVVLMTDGDNTRQYDLRDIYDSAGR
YVGFREGYAPIFRNTSTGQYSIWWEDQGAFWIPTGNTRDPGGSWQAQPDGGWSRYGMTALEFTEDRANAFDPAEAGNGEV
LLWADLFSDHTAGYIAAEWFHAPADESEQWDFYNQLAENPSHNYIGWDSDGVRPDGVVGQSQADTNLMAICDVANAAGII
VYAIGFEAPDRGQRVMEHCASVDANYFDVEGREISEAFASIARSINQLRLIQ

Sequences:

>Translated_612_residues
MGVFRREDLWPIGFMIRRDGMFGLFQKMQTSAGAIAARLAPRQFMRREEGTITAFATMLFILMVGASGIAIDVMRYETQR
SQLQYTLDRAVLAAASLTQPYDPEGVVRDYFAIAGIDGYRLDVRVEEGLNFRRVHAYAELEVRSIFMQMFGVRAMTSPAI
GAAEERVRRIEVSMVLDISGSMGENNRMTNMRPAAREFVTEVLSANENVNNELLVSVSIVPYNGRVNGGDLIESVFTYDD
LHSESNCTRFAEADFTSTAIDPAVPLQRIAHWDRGNEEEDESFQWAHCQTDQYGAILPWQHTEAALHAHIDSLNTGGWTA
IDLGMNWAVGLLDPAAAPALTGLIASGHVHPEFSDRPAPYRDGDRATTIDDETIKVVVLMTDGDNTRQYDLRDIYDSAGR
YVGFREGYAPIFRNTSTGQYSIWWEDQGAFWIPTGNTRDPGGSWQAQPDGGWSRYGMTALEFTEDRANAFDPAEAGNGEV
LLWADLFSDHTAGYIAAEWFHAPADESEQWDFYNQLAENPSHNYIGWDSDGVRPDGVVGQSQADTNLMAICDVANAAGII
VYAIGFEAPDRGQRVMEHCASVDANYFDVEGREISEAFASIARSINQLRLIQ
>Mature_611_residues
GVFRREDLWPIGFMIRRDGMFGLFQKMQTSAGAIAARLAPRQFMRREEGTITAFATMLFILMVGASGIAIDVMRYETQRS
QLQYTLDRAVLAAASLTQPYDPEGVVRDYFAIAGIDGYRLDVRVEEGLNFRRVHAYAELEVRSIFMQMFGVRAMTSPAIG
AAEERVRRIEVSMVLDISGSMGENNRMTNMRPAAREFVTEVLSANENVNNELLVSVSIVPYNGRVNGGDLIESVFTYDDL
HSESNCTRFAEADFTSTAIDPAVPLQRIAHWDRGNEEEDESFQWAHCQTDQYGAILPWQHTEAALHAHIDSLNTGGWTAI
DLGMNWAVGLLDPAAAPALTGLIASGHVHPEFSDRPAPYRDGDRATTIDDETIKVVVLMTDGDNTRQYDLRDIYDSAGRY
VGFREGYAPIFRNTSTGQYSIWWEDQGAFWIPTGNTRDPGGSWQAQPDGGWSRYGMTALEFTEDRANAFDPAEAGNGEVL
LWADLFSDHTAGYIAAEWFHAPADESEQWDFYNQLAENPSHNYIGWDSDGVRPDGVVGQSQADTNLMAICDVANAAGIIV
YAIGFEAPDRGQRVMEHCASVDANYFDVEGREISEAFASIARSINQLRLIQ

Specific function: Unknown

COG id: COG4961

COG function: function code U; Flp pilus assembly protein TadG

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68089; Mature: 67958

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVFRREDLWPIGFMIRRDGMFGLFQKMQTSAGAIAARLAPRQFMRREEGTITAFATMLF
CCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHH
ILMVGASGIAIDVMRYETQRSQLQYTLDRAVLAAASLTQPYDPEGVVRDYFAIAGIDGYR
HHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEE
LDVRVEEGLNFRRVHAYAELEVRSIFMQMFGVRAMTSPAIGAAEERVRRIEVSMVLDISG
EEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHEEEEEEEEEECC
SMGENNRMTNMRPAAREFVTEVLSANENVNNELLVSVSIVPYNGRVNGGDLIESVFTYDD
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHH
LHSESNCTRFAEADFTSTAIDPAVPLQRIAHWDRGNEEEDESFQWAHCQTDQYGAILPWQ
HCCCCCCCEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCC
HTEAALHAHIDSLNTGGWTAIDLGMNWAVGLLDPAAAPALTGLIASGHVHPEFSDRPAPY
CHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
RDGDRATTIDDETIKVVVLMTDGDNTRQYDLRDIYDSAGRYVGFREGYAPIFRNTSTGQY
CCCCCCEEECCCEEEEEEEEECCCCCCEEHHHHHHHHCCCEEEECCCCCHHHCCCCCCEE
SIWWEDQGAFWIPTGNTRDPGGSWQAQPDGGWSRYGMTALEFTEDRANAFDPAEAGNGEV
EEEEECCCCEEECCCCCCCCCCCCCCCCCCCCHHHCCEEEEECCCCCCCCCCCCCCCCCE
LLWADLFSDHTAGYIAAEWFHAPADESEQWDFYNQLAENPSHNYIGWDSDGVRPDGVVGQ
EEEEECCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
SQADTNLMAICDVANAAGIIVYAIGFEAPDRGQRVMEHCASVDANYFDVEGREISEAFAS
CCCCCCEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCEEECCCHHHHHHHHH
IARSINQLRLIQ
HHHHHHHHCCCC
>Mature Secondary Structure 
GVFRREDLWPIGFMIRRDGMFGLFQKMQTSAGAIAARLAPRQFMRREEGTITAFATMLF
CCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHH
ILMVGASGIAIDVMRYETQRSQLQYTLDRAVLAAASLTQPYDPEGVVRDYFAIAGIDGYR
HHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEE
LDVRVEEGLNFRRVHAYAELEVRSIFMQMFGVRAMTSPAIGAAEERVRRIEVSMVLDISG
EEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHEEEEEEEEEECC
SMGENNRMTNMRPAAREFVTEVLSANENVNNELLVSVSIVPYNGRVNGGDLIESVFTYDD
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHH
LHSESNCTRFAEADFTSTAIDPAVPLQRIAHWDRGNEEEDESFQWAHCQTDQYGAILPWQ
HCCCCCCCEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCC
HTEAALHAHIDSLNTGGWTAIDLGMNWAVGLLDPAAAPALTGLIASGHVHPEFSDRPAPY
CHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
RDGDRATTIDDETIKVVVLMTDGDNTRQYDLRDIYDSAGRYVGFREGYAPIFRNTSTGQY
CCCCCCEEECCCEEEEEEEEECCCCCCEEHHHHHHHHCCCEEEECCCCCHHHCCCCCCEE
SIWWEDQGAFWIPTGNTRDPGGSWQAQPDGGWSRYGMTALEFTEDRANAFDPAEAGNGEV
EEEEECCCCEEECCCCCCCCCCCCCCCCCCCCHHHCCEEEEECCCCCCCCCCCCCCCCCE
LLWADLFSDHTAGYIAAEWFHAPADESEQWDFYNQLAENPSHNYIGWDSDGVRPDGVVGQ
EEEEECCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
SQADTNLMAICDVANAAGIIVYAIGFEAPDRGQRVMEHCASVDANYFDVEGREISEAFAS
CCCCCCEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCEEECCCHHHHHHHHH
IARSINQLRLIQ
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA