Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055930

Identifier: 89055930

GI number: 89055930

Start: 3484559

End: 3485065

Strand: Direct

Name: 89055930

Synonym: Jann_3439

Alternate gene names: NA

Gene position: 3484559-3485065 (Clockwise)

Preceding gene: 89055928

Following gene: 89055932

Centisome position: 80.7

GC content: 67.46

Gene sequence:

>507_bases
ATGGCGCGGAAGAAGAAGATCGACCCCGATGAGCATCTGGCCAGCATCATCCCGCGCGCGCCCCGCCGGGTTGTGGCCGT
GGGCTTCATCGTCTCGCTCGCCGTCATCGTCTGGACCGTGGCCGCCCTGCGCCCGCCCGAGCATTTCGGCTACATGCTGT
TTCTGGTCTTCTTCGGGGCGGGCTGCTTCTGGCTCGGCTACACCATGTGGCACGCCTCGGCCCGTGAGATCGAGTTGACC
CGGTCCGAGCTGCGCGAGGTAGGGGGGCGCGTGCTGTGCACCGTCGACAACGTCGCCCGCGTGGACCGCGGGGCGTTCGC
GTTCAAGCCCGCCGGTGGCTTCCTCATTCGCTTGAAAGAGCCCCACGCCCCGCGCGTTTACGCACCCGGCCTGTGGTGGC
GCTGGGGCCGGACATTGGCCGTAGGCGGTGTCACCGCACGCCAGGATGGCAAGAACGTCGCTGACATGATGATCGTGATG
CTGGTGGAGCGCGGCGAAGACGTCTGA

Upstream 100 bases:

>100_bases
ACGAATAGACATAGGTTTGTCTCCTTGCGGCGTGGTTGCCCCCTAGGTAGGACCGGGCAGAGCCTCCGTCACCCCCGCAC
GGCGGCACGAAAGGTGTGCA

Downstream 100 bases:

>100_bases
CCGGGCCAGCCCGCGTCACGATGGCGGTCGCCGCCCGCTTCAGGGGCTCTCCTCGGCGCTATCCGGCATCACGCCGCACG
GTCCAGGACCCCACTGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MARKKKIDPDEHLASIIPRAPRRVVAVGFIVSLAVIVWTVAALRPPEHFGYMLFLVFFGAGCFWLGYTMWHASAREIELT
RSELREVGGRVLCTVDNVARVDRGAFAFKPAGGFLIRLKEPHAPRVYAPGLWWRWGRTLAVGGVTARQDGKNVADMMIVM
LVERGEDV

Sequences:

>Translated_168_residues
MARKKKIDPDEHLASIIPRAPRRVVAVGFIVSLAVIVWTVAALRPPEHFGYMLFLVFFGAGCFWLGYTMWHASAREIELT
RSELREVGGRVLCTVDNVARVDRGAFAFKPAGGFLIRLKEPHAPRVYAPGLWWRWGRTLAVGGVTARQDGKNVADMMIVM
LVERGEDV
>Mature_167_residues
ARKKKIDPDEHLASIIPRAPRRVVAVGFIVSLAVIVWTVAALRPPEHFGYMLFLVFFGAGCFWLGYTMWHASAREIELTR
SELREVGGRVLCTVDNVARVDRGAFAFKPAGGFLIRLKEPHAPRVYAPGLWWRWGRTLAVGGVTARQDGKNVADMMIVML
VERGEDV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18804; Mature: 18673

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKKKIDPDEHLASIIPRAPRRVVAVGFIVSLAVIVWTVAALRPPEHFGYMLFLVFFGA
CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
GCFWLGYTMWHASAREIELTRSELREVGGRVLCTVDNVARVDRGAFAFKPAGGFLIRLKE
HHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEEEEHHHHHHCCCCEEEECCCCEEEEEEC
PHAPRVYAPGLWWRWGRTLAVGGVTARQDGKNVADMMIVMLVERGEDV
CCCCEEECCCCEECCCCEEEECCEECCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ARKKKIDPDEHLASIIPRAPRRVVAVGFIVSLAVIVWTVAALRPPEHFGYMLFLVFFGA
CCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
GCFWLGYTMWHASAREIELTRSELREVGGRVLCTVDNVARVDRGAFAFKPAGGFLIRLKE
HHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEEEEHHHHHHCCCCEEEECCCCEEEEEEC
PHAPRVYAPGLWWRWGRTLAVGGVTARQDGKNVADMMIVMLVERGEDV
CCCCEEECCCCEECCCCEEEECCEECCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA