| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055928
Identifier: 89055928
GI number: 89055928
Start: 3483077
End: 3483448
Strand: Direct
Name: 89055928
Synonym: Jann_3437
Alternate gene names: NA
Gene position: 3483077-3483448 (Clockwise)
Preceding gene: 89055923
Following gene: 89055930
Centisome position: 80.66
GC content: 70.43
Gene sequence:
>372_bases ATGGATCACGCAGGCTACACAGAGCTGACCGAAGAGCTGCGCGGCCTGATGGCCGACCGCCTGTCGGTGCGGGCCCGCAC CTTCCCCAAAGCCGTGCGCAAGGCCGGGCGACTGTTGCCTGAGCCCGCGCGGCAGGCCGCCCGGGAGTTGGTGGAGATAG AGGCGCGTCTGGCCCATCCCAAGCTCGCCGCCCGCACGGATCCGATGCAGACGCAACGTGCCGCCGAGACACTGCGCACC AGCCTCCTGCGCCACCGGTCCGGCGCCCTCGCCGGGCAGCGTCGTAGCCTTCTGGCCGCCGAAATCGGCTTCCGCGCGCT GGTCATATTGGGCGCCGGTCTCGCGTTTGTGCAGTGGCAAGGGCTGGCCTGA
Upstream 100 bases:
>100_bases AGGCCGCCGGACGATGGAAATCCAGCCAAAGCCAATGGGTTGAGCGGCGGTAGCCCACGTTCTACCTTCGCGCGGATACA GCAGGGGACGGCCCGATTCG
Downstream 100 bases:
>100_bases CCACCCCGGACCAACACTTCCAGATTGCGCCCATGGGGGGGAGCGCGAGGGGGGCTTCCCCCCTCGCCACCGTCGCGCTT GCGAAGCAAGGCGAAATCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MDHAGYTELTEELRGLMADRLSVRARTFPKAVRKAGRLLPEPARQAARELVEIEARLAHPKLAARTDPMQTQRAAETLRT SLLRHRSGALAGQRRSLLAAEIGFRALVILGAGLAFVQWQGLA
Sequences:
>Translated_123_residues MDHAGYTELTEELRGLMADRLSVRARTFPKAVRKAGRLLPEPARQAARELVEIEARLAHPKLAARTDPMQTQRAAETLRT SLLRHRSGALAGQRRSLLAAEIGFRALVILGAGLAFVQWQGLA >Mature_123_residues MDHAGYTELTEELRGLMADRLSVRARTFPKAVRKAGRLLPEPARQAARELVEIEARLAHPKLAARTDPMQTQRAAETLRT SLLRHRSGALAGQRRSLLAAEIGFRALVILGAGLAFVQWQGLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13534; Mature: 13534
Theoretical pI: Translated: 11.87; Mature: 11.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDHAGYTELTEELRGLMADRLSVRARTFPKAVRKAGRLLPEPARQAARELVEIEARLAHP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC KLAARTDPMQTQRAAETLRTSLLRHRSGALAGQRRSLLAAEIGFRALVILGAGLAFVQWQ HHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCC GLA CCC >Mature Secondary Structure MDHAGYTELTEELRGLMADRLSVRARTFPKAVRKAGRLLPEPARQAARELVEIEARLAHP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC KLAARTDPMQTQRAAETLRTSLLRHRSGALAGQRRSLLAAEIGFRALVILGAGLAFVQWQ HHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCC GLA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA