Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055928

Identifier: 89055928

GI number: 89055928

Start: 3483077

End: 3483448

Strand: Direct

Name: 89055928

Synonym: Jann_3437

Alternate gene names: NA

Gene position: 3483077-3483448 (Clockwise)

Preceding gene: 89055923

Following gene: 89055930

Centisome position: 80.66

GC content: 70.43

Gene sequence:

>372_bases
ATGGATCACGCAGGCTACACAGAGCTGACCGAAGAGCTGCGCGGCCTGATGGCCGACCGCCTGTCGGTGCGGGCCCGCAC
CTTCCCCAAAGCCGTGCGCAAGGCCGGGCGACTGTTGCCTGAGCCCGCGCGGCAGGCCGCCCGGGAGTTGGTGGAGATAG
AGGCGCGTCTGGCCCATCCCAAGCTCGCCGCCCGCACGGATCCGATGCAGACGCAACGTGCCGCCGAGACACTGCGCACC
AGCCTCCTGCGCCACCGGTCCGGCGCCCTCGCCGGGCAGCGTCGTAGCCTTCTGGCCGCCGAAATCGGCTTCCGCGCGCT
GGTCATATTGGGCGCCGGTCTCGCGTTTGTGCAGTGGCAAGGGCTGGCCTGA

Upstream 100 bases:

>100_bases
AGGCCGCCGGACGATGGAAATCCAGCCAAAGCCAATGGGTTGAGCGGCGGTAGCCCACGTTCTACCTTCGCGCGGATACA
GCAGGGGACGGCCCGATTCG

Downstream 100 bases:

>100_bases
CCACCCCGGACCAACACTTCCAGATTGCGCCCATGGGGGGGAGCGCGAGGGGGGCTTCCCCCCTCGCCACCGTCGCGCTT
GCGAAGCAAGGCGAAATCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MDHAGYTELTEELRGLMADRLSVRARTFPKAVRKAGRLLPEPARQAARELVEIEARLAHPKLAARTDPMQTQRAAETLRT
SLLRHRSGALAGQRRSLLAAEIGFRALVILGAGLAFVQWQGLA

Sequences:

>Translated_123_residues
MDHAGYTELTEELRGLMADRLSVRARTFPKAVRKAGRLLPEPARQAARELVEIEARLAHPKLAARTDPMQTQRAAETLRT
SLLRHRSGALAGQRRSLLAAEIGFRALVILGAGLAFVQWQGLA
>Mature_123_residues
MDHAGYTELTEELRGLMADRLSVRARTFPKAVRKAGRLLPEPARQAARELVEIEARLAHPKLAARTDPMQTQRAAETLRT
SLLRHRSGALAGQRRSLLAAEIGFRALVILGAGLAFVQWQGLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13534; Mature: 13534

Theoretical pI: Translated: 11.87; Mature: 11.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHAGYTELTEELRGLMADRLSVRARTFPKAVRKAGRLLPEPARQAARELVEIEARLAHP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
KLAARTDPMQTQRAAETLRTSLLRHRSGALAGQRRSLLAAEIGFRALVILGAGLAFVQWQ
HHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCC
GLA
CCC
>Mature Secondary Structure
MDHAGYTELTEELRGLMADRLSVRARTFPKAVRKAGRLLPEPARQAARELVEIEARLAHP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
KLAARTDPMQTQRAAETLRTSLLRHRSGALAGQRRSLLAAEIGFRALVILGAGLAFVQWQ
HHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCC
GLA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA