Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055917

Identifier: 89055917

GI number: 89055917

Start: 3473467

End: 3474096

Strand: Direct

Name: 89055917

Synonym: Jann_3426

Alternate gene names: NA

Gene position: 3473467-3474096 (Clockwise)

Preceding gene: 89055916

Following gene: 89055922

Centisome position: 80.44

GC content: 68.73

Gene sequence:

>630_bases
TTGGCGGGACCGACCCAAACGGACGCTCCAAGGCCCCGGTTCTCACGCGGCAGCCTGTCTGAGCCGTGCCCTGCGCGCCC
AAAGGCCCCCATGACCCCACACCACATTCTGATCTCCGGCTGCTCCGGCGGCGGCAAGTCCACCCTGCTCAGCGCCCTTG
CCCAGCGTGGTTTTGCCACCGTGCCGGAGCCGGGCCGCCGCATCGTCGCACAGGAACGTGCGGGCAATGGCAACGCCCTG
CCCTGGGTCAAACCGCTGGCCTTCGCCCGCCATGCGCTGGACATGGCGGCCTCTGATCTGGCCACCGCCACGACCGCGGG
CGATGATGTGGTGTTCTTCGACCGCGGGATGATTGATGCCGCCGTCGCCTGCGCCCATGCCGGGGGGCCGTCCTATCGCA
CGCTCCTCCCCGATCCGCTGCCCTATGCGCGGCGCGTCTTCCTCACCCCGCCCTGGCCCGAGATCTTTGTGCAGGACGCC
GCGCGCCAACACGGCCTGGACGACGCCGAGGCGGAATACCTGCGCCTTTCGCAAGCCCTCGACGACTTCGGCTATGAGAC
ACATGTCCTTCCGAAAGCGCCCGTGCAGGCCCGTGTCGACATCATCCTCGCGGATCTGGGCCTGTCGTGA

Upstream 100 bases:

>100_bases
GGTGATCACAGCGGCCACGGTGATATGGACACCGAAGACGATCATTCCGGCCACAGCACCGACGGCTGACAACTGCAAAC
TCCGGTCCCGCCCCTCGCTT

Downstream 100 bases:

>100_bases
TGCCCCTCACATCATCGCCGCCGCCGACCGTGCGGTGAAGACGCGGATGTAATCCCCGGGCGAGGACCCCGCCCAATAGA
CCCACAGCCGGAACGGATCA

Product: ATPase-like

Products: NA

Alternate protein names: ATPase; P-Loop Containing Nucleoside Triphosphate Hydrolase; ATPase-Like; Transcriptional Regulator

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MAGPTQTDAPRPRFSRGSLSEPCPARPKAPMTPHHILISGCSGGGKSTLLSALAQRGFATVPEPGRRIVAQERAGNGNAL
PWVKPLAFARHALDMAASDLATATTAGDDVVFFDRGMIDAAVACAHAGGPSYRTLLPDPLPYARRVFLTPPWPEIFVQDA
ARQHGLDDAEAEYLRLSQALDDFGYETHVLPKAPVQARVDIILADLGLS

Sequences:

>Translated_209_residues
MAGPTQTDAPRPRFSRGSLSEPCPARPKAPMTPHHILISGCSGGGKSTLLSALAQRGFATVPEPGRRIVAQERAGNGNAL
PWVKPLAFARHALDMAASDLATATTAGDDVVFFDRGMIDAAVACAHAGGPSYRTLLPDPLPYARRVFLTPPWPEIFVQDA
ARQHGLDDAEAEYLRLSQALDDFGYETHVLPKAPVQARVDIILADLGLS
>Mature_208_residues
AGPTQTDAPRPRFSRGSLSEPCPARPKAPMTPHHILISGCSGGGKSTLLSALAQRGFATVPEPGRRIVAQERAGNGNALP
WVKPLAFARHALDMAASDLATATTAGDDVVFFDRGMIDAAVACAHAGGPSYRTLLPDPLPYARRVFLTPPWPEIFVQDAA
RQHGLDDAEAEYLRLSQALDDFGYETHVLPKAPVQARVDIILADLGLS

Specific function: Unknown

COG id: COG3911

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22258; Mature: 22126

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGPTQTDAPRPRFSRGSLSEPCPARPKAPMTPHHILISGCSGGGKSTLLSALAQRGFAT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCC
VPEPGRRIVAQERAGNGNALPWVKPLAFARHALDMAASDLATATTAGDDVVFFDRGMIDA
CCCCCCEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHH
AVACAHAGGPSYRTLLPDPLPYARRVFLTPPWPEIFVQDAARQHGLDDAEAEYLRLSQAL
HHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
DDFGYETHVLPKAPVQARVDIILADLGLS
HHCCCCEECCCCCCCHHEEEEEEECCCCC
>Mature Secondary Structure 
AGPTQTDAPRPRFSRGSLSEPCPARPKAPMTPHHILISGCSGGGKSTLLSALAQRGFAT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCC
VPEPGRRIVAQERAGNGNALPWVKPLAFARHALDMAASDLATATTAGDDVVFFDRGMIDA
CCCCCCEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHH
AVACAHAGGPSYRTLLPDPLPYARRVFLTPPWPEIFVQDAARQHGLDDAEAEYLRLSQAL
HHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
DDFGYETHVLPKAPVQARVDIILADLGLS
HHCCCCEECCCCCCCHHEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA