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The map label for this gene is bexD [H]

Identifier: 89055910

GI number: 89055910

Start: 3466133

End: 3467287

Strand: Direct

Name: bexD [H]

Synonym: Jann_3419

Alternate gene names: 89055910

Gene position: 3466133-3467287 (Clockwise)

Preceding gene: 89055909

Following gene: 89055911

Centisome position: 80.27

GC content: 64.33

Gene sequence:

>1155_bases
GTGACATCGAGGGTTCCCCGTTTCGCGCGCATCGCCGCGCTGTGCACCTGTGTGGTTGCCGTGTCTGCATGCGATGTGCT
GACGCGCGTGCTTCCATCCGCAGGCCCCACCCGCAACCAGATCTTCGCAGGCTCCGTCCAGAACGACGGCGACGCTTTCG
TGGTGGAGGTCAACCAACGCGTCACCGCCGCAACATCCCTGGTGCCGTCATTGGGCTTCCCGCCGTCCTTACTGAATGCA
GGGATCTCCAACACCGACGTGATCCGCCCCGGCGACATGCTGACGCTGACGATTTTTGAAAACGTGACCGATGGCCTTCT
GGCCGGGGAAGGCGCGAATGCCGCCCAGTTGACAACGCTTCAGGTCGACAGCTCCGGTTTCATCTTCATCCCCTATGCGG
GCCGGATCCGTGCGGCGGGCAACACACCCGATCAGCTGCGCGAGATCATCACCCGCAACCTCGACGAACAAACGCCCGAT
CCCCAGGTCATCGTCTCGCGGGAGGCGGGTGACGGCGCGACCGTTGTTGTTGCAGGCGACGTCTCGGGCCAGGGTGTCTT
CCCCATCGAACGTCCCACCCGCACTCTCTCGGGCCTTTTGGCTGCTGCCGGGGCCACCACCGTCGATGCCGAAATTACAC
GCGTCACGCTTGTGCGGGGCGGTCAGACCGGCACCGTGTGGTATGAAGATGTCTTCCGCGACCCCTCCATCGATATCGCG
CTGCGGGCCAATGACCGCGTTCTGGTGGAGGGCGACTCGCGTCGGTTCACGGCCTTGGGGGCCACGGGTGCGCAGACGGT
CGTGGATTTCGACAGCCAGGTGATTTCTGCCATTGATGCGATTGCGTCGGTGGGCGGCCTCAACCCCTCCCTCGCGGACC
CGACCGGCGTGTTTGTCCTGCGCAATGAGCCGGAGGAGCTGGCCAATCTGGTCCTGGCCCGCGACGATCTGATCGGCACC
CAGCGGATGATCTATGTGCTGGACCTCACCGCCCCCACAGGCATGTTCGAGGCCCGCGATTTCGTGATCCGCGACGGCGA
TACCGTCTACGTTACCTCCGCCCCGATCACCCAGTTCAACACCGCGATCTCTGCGCTGACCGGCACGTTGACCGGCGTCA
CTGGTATCACGGACGCGGTCGACGGCACCAACTAG

Upstream 100 bases:

>100_bases
CCTCCTTGCAAAGGGCTTTCCCGAAACGGGCTTTTTAGCTAGTCTGCCAAAAAACGAGACAAAAATATCTGAGGCAGTTC
AGGCTAAAGGAGCCATCCCC

Downstream 100 bases:

>100_bases
GCCATGGCCCTCGCAGGCGATAGCGGCACGGAGCCTTCCGAGGCCCCGTCCGCGCCCCGCCGCCGTGCCTATCACTACAA
TGCAGGTTTCCTGACCAACA

Product: polysaccharide export protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 383

Protein sequence:

>384_residues
MTSRVPRFARIAALCTCVVAVSACDVLTRVLPSAGPTRNQIFAGSVQNDGDAFVVEVNQRVTAATSLVPSLGFPPSLLNA
GISNTDVIRPGDMLTLTIFENVTDGLLAGEGANAAQLTTLQVDSSGFIFIPYAGRIRAAGNTPDQLREIITRNLDEQTPD
PQVIVSREAGDGATVVVAGDVSGQGVFPIERPTRTLSGLLAAAGATTVDAEITRVTLVRGGQTGTVWYEDVFRDPSIDIA
LRANDRVLVEGDSRRFTALGATGAQTVVDFDSQVISAIDAIASVGGLNPSLADPTGVFVLRNEPEELANLVLARDDLIGT
QRMIYVLDLTAPTGMFEARDFVIRDGDTVYVTSAPITQFNTAISALTGTLTGVTGITDAVDGTN

Sequences:

>Translated_384_residues
MTSRVPRFARIAALCTCVVAVSACDVLTRVLPSAGPTRNQIFAGSVQNDGDAFVVEVNQRVTAATSLVPSLGFPPSLLNA
GISNTDVIRPGDMLTLTIFENVTDGLLAGEGANAAQLTTLQVDSSGFIFIPYAGRIRAAGNTPDQLREIITRNLDEQTPD
PQVIVSREAGDGATVVVAGDVSGQGVFPIERPTRTLSGLLAAAGATTVDAEITRVTLVRGGQTGTVWYEDVFRDPSIDIA
LRANDRVLVEGDSRRFTALGATGAQTVVDFDSQVISAIDAIASVGGLNPSLADPTGVFVLRNEPEELANLVLARDDLIGT
QRMIYVLDLTAPTGMFEARDFVIRDGDTVYVTSAPITQFNTAISALTGTLTGVTGITDAVDGTN
>Mature_383_residues
TSRVPRFARIAALCTCVVAVSACDVLTRVLPSAGPTRNQIFAGSVQNDGDAFVVEVNQRVTAATSLVPSLGFPPSLLNAG
ISNTDVIRPGDMLTLTIFENVTDGLLAGEGANAAQLTTLQVDSSGFIFIPYAGRIRAAGNTPDQLREIITRNLDEQTPDP
QVIVSREAGDGATVVVAGDVSGQGVFPIERPTRTLSGLLAAAGATTVDAEITRVTLVRGGQTGTVWYEDVFRDPSIDIAL
RANDRVLVEGDSRRFTALGATGAQTVVDFDSQVISAIDAIASVGGLNPSLADPTGVFVLRNEPEELANLVLARDDLIGTQ
RMIYVLDLTAPTGMFEARDFVIRDGDTVYVTSAPITQFNTAISALTGTLTGVTGITDAVDGTN

Specific function: May form an ATP-driven capsule polysaccharide export apparatus, in association with the BexA, BexB and BexC proteins. May function as a membrane anchor for capsular polysaccharides. Possible porin properties [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexD/CtrA/VexA family [H]

Homologues:

Organism=Escherichia coli, GI1787218, Length=291, Percent_Identity=30.9278350515464, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1788376, Length=387, Percent_Identity=24.8062015503876, Blast_Score=96, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715 [H]

Pfam domain/function: PF02563 Poly_export [H]

EC number: NA

Molecular weight: Translated: 40212; Mature: 40081

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSRVPRFARIAALCTCVVAVSACDVLTRVLPSAGPTRNQIFAGSVQNDGDAFVVEVNQR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEEEEECCC
VTAATSLVPSLGFPPSLLNAGISNTDVIRPGDMLTLTIFENVTDGLLAGEGANAAQLTTL
HHHHHHHHCCCCCCHHHHHCCCCCCCEECCCCEEEEEEECCCCCCCEECCCCCCEEEEEE
QVDSSGFIFIPYAGRIRAAGNTPDQLREIITRNLDEQTPDPQVIVSREAGDGATVVVAGD
EECCCCEEEEECCCEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEEEEEC
VSGQGVFPIERPTRTLSGLLAAAGATTVDAEITRVTLVRGGQTGTVWYEDVFRDPSIDIA
CCCCCEECCCCCHHHHHHHHHHCCCCEECCEEEEEEEEECCCCCEEEHHHHHCCCCEEEE
LRANDRVLVEGDSRRFTALGATGAQTVVDFDSQVISAIDAIASVGGLNPSLADPTGVFVL
EECCCEEEEECCCCEEEEECCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE
RNEPEELANLVLARDDLIGTQRMIYVLDLTAPTGMFEARDFVIRDGDTVYVTSAPITQFN
CCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEEEECCCEEEEECCCCHHHH
TAISALTGTLTGVTGITDAVDGTN
HHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
TSRVPRFARIAALCTCVVAVSACDVLTRVLPSAGPTRNQIFAGSVQNDGDAFVVEVNQR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEEEEECCC
VTAATSLVPSLGFPPSLLNAGISNTDVIRPGDMLTLTIFENVTDGLLAGEGANAAQLTTL
HHHHHHHHCCCCCCHHHHHCCCCCCCEECCCCEEEEEEECCCCCCCEECCCCCCEEEEEE
QVDSSGFIFIPYAGRIRAAGNTPDQLREIITRNLDEQTPDPQVIVSREAGDGATVVVAGD
EECCCCEEEEECCCEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEEEEEC
VSGQGVFPIERPTRTLSGLLAAAGATTVDAEITRVTLVRGGQTGTVWYEDVFRDPSIDIA
CCCCCEECCCCCHHHHHHHHHHCCCCEECCEEEEEEEEECCCCCEEEHHHHHCCCCEEEE
LRANDRVLVEGDSRRFTALGATGAQTVVDFDSQVISAIDAIASVGGLNPSLADPTGVFVL
EECCCEEEEECCCCEEEEECCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE
RNEPEELANLVLARDDLIGTQRMIYVLDLTAPTGMFEARDFVIRDGDTVYVTSAPITQFN
CCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEEEECCCEEEEECCCCHHHH
TAISALTGTLTGVTGITDAVDGTN
HHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2082145 [H]