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The map label for this gene is kpsC [H]

Identifier: 89055911

GI number: 89055911

Start: 3467291

End: 3469342

Strand: Direct

Name: kpsC [H]

Synonym: Jann_3420

Alternate gene names: 89055911

Gene position: 3467291-3469342 (Clockwise)

Preceding gene: 89055910

Following gene: 89055915

Centisome position: 80.3

GC content: 68.08

Gene sequence:

>2052_bases
ATGGCCCTCGCAGGCGATAGCGGCACGGAGCCTTCCGAGGCCCCGTCCGCGCCCCGCCGCCGTGCCTATCACTACAATGC
AGGTTTCCTGACCAACACGCGCGTGCGCCGCATCCTGGCGTTGGCGGGCTATGACTTGAAGCTCGGCACACCGGACGCGG
CGGATGACGTCATCGTCTGGGGCCATTCCCCCTATGCGCCGCGCGGTGAGGCTGTGGCCGACAGCACCGGCGCCCATCTG
GTGCGGGTGGAGGATGCGTTCCTGCGCTCCCTCCGTCCGGGCCGTTCCGGCGAGCCGCCTCTGGGCCTCGTGATCGACCG
GCGCGGCATGTATTTCGATGCCACGCGCGCCTCGGATCTGGAACATATCCTGGCCACGCACCCCTTTGATGACACGGCGC
TCTTGAACCGCGCCCGCGATGTCATGGCCCGGATGGCCGAGGGGCATCTGTCGAAATACGCCGCGACGGACCCGGCACTG
GATCCGCCCGCGCCCGGTTACGTTCTGCTGATCGACCAGACCAAAGGCGACGCCTCCATCCAGCTCGGTCAAGCCACGCC
CGACAGCTTTGCCGAGGCGCTGACCTGGGCCCGCGAAGACCATCCCGACGCCCATATCGTCGTCAAGACCCACCCCGAAA
CCCGCGACGGCCACCGCCCCGGTCACTTTGACCCGGACGGACTGCCGCCCAATGTCTCTCTCGATGATCGCCCGATCAGC
CTTTGGCGCATGTTTGAAGGCGCGCGGGCCGTTTATACCGTGACCTCCCAAGCGGGGTTCGAGGCGATCCTGGCGGGCCA
CAAGCCAGTCACCTTCGGCGTGCCGTTCTATGCCGGATGGGGTCTGACCGATGACCGCCGCCCGGTGCCCGTCCGTCGCC
AACGGGTGCTGACCCGCGCGCAATTGGTCGCCGGGGCGCTGTTGCTCTACCCCACATGGTACGACCCCTACCGCGACGGG
TTGGGAGAGGTCGAAGACACCCTCGGCGCGTTGGAGGCCCAGGCCCGCAGCTGGCGAGAGGACCGCGCGGGCTACACCGC
CATCGGGATGAGCCGTTGGAAAAGGGGGCATTTGCGGGCCGGGTTCGGCCAACACGGGCCGCTGGACTTCGCCGATCAGC
CTGTCGCAGGGCGGCCGACGCTGGTCTGGGCCGGGAAGGAAACGTCTGAGCTTCAGGCCGCCTGCGGTGACGCGCACCTG
CTGCGGATGGAAGACGGGTTCCTGCGGTCGCGCGGTCTGGGGGCCGATCTTGTGCCGCCCCTGTCCCTCGTTCTCGACGA
CCTCGGCATCTACTACGACCCCACGCGCGAGAGCCGGTTGGAGCGGTTGATTGCAGAGGCCGCAGCCCTTCCTCCCGCAC
GCCTGGACCGGGCGGAGCGTCTTATCCAGACCCTGCGTCGAACGGGTCTGACCAAGTACAATCTGCCCGGCGGGGCGCTG
CCGGATATTCCCCCGGATCGACCATTGGTCCTTATCCCGGGACAGGTCGAAGATGACGCCTCCATCCGACTCGGCGCAGG
CGCGATCACCACCAACGCCGCGCTGTTGGCCGAGGCGCGCAGGCTCCACCCGGGCGCCTATCTCATCTACAAGCCCCACC
CCGATGTGGAGGCCGGATTGCGCATCGGGGTCCTTCCGGAGGAGGCGCGCCACCTGGCCGATCATATCGCCGAGACGACT
GGGGCGGAGGCGCTGTTGGCCCTCTCCCCCCACGTCATCACCATGACCTCCGCTATGGGATTTGAAGCGCTGATCCGGGG
CCTTCCCGTCACGACCCTCGGCGCGCCGTTCTATGCCGGATGGGGCCTGACGACGGACCTCGGTGACGTGCCCCCGCGCC
GCACGGCCCGCCCCTCCCTGGCCGCGCTCGTCCACGCCGCGCTGATCACCTATCCCCGCTACATGGACCCTCGCACCGGC
CTGCCCTGCCCCGTCGAAATCGCGGTCGAGCGGCTGTCATCCGGCGAGGGTATGCCGTCCAAACCGATCCTGCGTATCGT
GGCAAAATTGCAAATCTGGCTGTCCGGTCAATCCCGGCTCTGGCGTCGGTAG

Upstream 100 bases:

>100_bases
CGCCCCGATCACCCAGTTCAACACCGCGATCTCTGCGCTGACCGGCACGTTGACCGGCGTCACTGGTATCACGGACGCGG
TCGACGGCACCAACTAGGCC

Downstream 100 bases:

>100_bases
ATTACATAAAACTCGCGTTTCGCAGTCTGATATCGGCACTTATCCACAGAATAAAATCCCTAATCGAACTATTCCACAGT
GCGCGTCCAGAGGCTCAGCG

Product: capsule polysaccharide biosynthesis

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 683; Mature: 682

Protein sequence:

>683_residues
MALAGDSGTEPSEAPSAPRRRAYHYNAGFLTNTRVRRILALAGYDLKLGTPDAADDVIVWGHSPYAPRGEAVADSTGAHL
VRVEDAFLRSLRPGRSGEPPLGLVIDRRGMYFDATRASDLEHILATHPFDDTALLNRARDVMARMAEGHLSKYAATDPAL
DPPAPGYVLLIDQTKGDASIQLGQATPDSFAEALTWAREDHPDAHIVVKTHPETRDGHRPGHFDPDGLPPNVSLDDRPIS
LWRMFEGARAVYTVTSQAGFEAILAGHKPVTFGVPFYAGWGLTDDRRPVPVRRQRVLTRAQLVAGALLLYPTWYDPYRDG
LGEVEDTLGALEAQARSWREDRAGYTAIGMSRWKRGHLRAGFGQHGPLDFADQPVAGRPTLVWAGKETSELQAACGDAHL
LRMEDGFLRSRGLGADLVPPLSLVLDDLGIYYDPTRESRLERLIAEAAALPPARLDRAERLIQTLRRTGLTKYNLPGGAL
PDIPPDRPLVLIPGQVEDDASIRLGAGAITTNAALLAEARRLHPGAYLIYKPHPDVEAGLRIGVLPEEARHLADHIAETT
GAEALLALSPHVITMTSAMGFEALIRGLPVTTLGAPFYAGWGLTTDLGDVPPRRTARPSLAALVHAALITYPRYMDPRTG
LPCPVEIAVERLSSGEGMPSKPILRIVAKLQIWLSGQSRLWRR

Sequences:

>Translated_683_residues
MALAGDSGTEPSEAPSAPRRRAYHYNAGFLTNTRVRRILALAGYDLKLGTPDAADDVIVWGHSPYAPRGEAVADSTGAHL
VRVEDAFLRSLRPGRSGEPPLGLVIDRRGMYFDATRASDLEHILATHPFDDTALLNRARDVMARMAEGHLSKYAATDPAL
DPPAPGYVLLIDQTKGDASIQLGQATPDSFAEALTWAREDHPDAHIVVKTHPETRDGHRPGHFDPDGLPPNVSLDDRPIS
LWRMFEGARAVYTVTSQAGFEAILAGHKPVTFGVPFYAGWGLTDDRRPVPVRRQRVLTRAQLVAGALLLYPTWYDPYRDG
LGEVEDTLGALEAQARSWREDRAGYTAIGMSRWKRGHLRAGFGQHGPLDFADQPVAGRPTLVWAGKETSELQAACGDAHL
LRMEDGFLRSRGLGADLVPPLSLVLDDLGIYYDPTRESRLERLIAEAAALPPARLDRAERLIQTLRRTGLTKYNLPGGAL
PDIPPDRPLVLIPGQVEDDASIRLGAGAITTNAALLAEARRLHPGAYLIYKPHPDVEAGLRIGVLPEEARHLADHIAETT
GAEALLALSPHVITMTSAMGFEALIRGLPVTTLGAPFYAGWGLTTDLGDVPPRRTARPSLAALVHAALITYPRYMDPRTG
LPCPVEIAVERLSSGEGMPSKPILRIVAKLQIWLSGQSRLWRR
>Mature_682_residues
ALAGDSGTEPSEAPSAPRRRAYHYNAGFLTNTRVRRILALAGYDLKLGTPDAADDVIVWGHSPYAPRGEAVADSTGAHLV
RVEDAFLRSLRPGRSGEPPLGLVIDRRGMYFDATRASDLEHILATHPFDDTALLNRARDVMARMAEGHLSKYAATDPALD
PPAPGYVLLIDQTKGDASIQLGQATPDSFAEALTWAREDHPDAHIVVKTHPETRDGHRPGHFDPDGLPPNVSLDDRPISL
WRMFEGARAVYTVTSQAGFEAILAGHKPVTFGVPFYAGWGLTDDRRPVPVRRQRVLTRAQLVAGALLLYPTWYDPYRDGL
GEVEDTLGALEAQARSWREDRAGYTAIGMSRWKRGHLRAGFGQHGPLDFADQPVAGRPTLVWAGKETSELQAACGDAHLL
RMEDGFLRSRGLGADLVPPLSLVLDDLGIYYDPTRESRLERLIAEAAALPPARLDRAERLIQTLRRTGLTKYNLPGGALP
DIPPDRPLVLIPGQVEDDASIRLGAGAITTNAALLAEARRLHPGAYLIYKPHPDVEAGLRIGVLPEEARHLADHIAETTG
AEALLALSPHVITMTSAMGFEALIRGLPVTTLGAPFYAGWGLTTDLGDVPPRRTARPSLAALVHAALITYPRYMDPRTGL
PCPVEIAVERLSSGEGMPSKPILRIVAKLQIWLSGQSRLWRR

Specific function: Unknown

COG id: COG3563

COG function: function code M; Capsule polysaccharide export protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To R.meliloti lipopolysaccharide processing protein lpsZ [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007833 [H]

Pfam domain/function: PF05159 Capsule_synth [H]

EC number: NA

Molecular weight: Translated: 74341; Mature: 74210

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALAGDSGTEPSEAPSAPRRRAYHYNAGFLTNTRVRRILALAGYDLKLGTPDAADDVIVW
CCCCCCCCCCCCCCCCCCHHCEEEECCCCEEHHHHHHHHHHHCCCEECCCCCCCCCEEEE
GHSPYAPRGEAVADSTGAHLVRVEDAFLRSLRPGRSGEPPLGLVIDRRGMYFDATRASDL
CCCCCCCCCCCCCCCCCCEEEEECHHHHHHCCCCCCCCCCEEEEEECCCCEEECCCHHHH
EHILATHPFDDTALLNRARDVMARMAEGHLSKYAATDPALDPPAPGYVLLIDQTKGDASI
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCEE
QLGQATPDSFAEALTWAREDHPDAHIVVKTHPETRDGHRPGHFDPDGLPPNVSLDDRPIS
EECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
LWRMFEGARAVYTVTSQAGFEAILAGHKPVTFGVPFYAGWGLTDDRRPVPVRRQRVLTRA
HHHHHCCCCEEEEEECCCCCHHHHCCCCCEEECCCCEECCCCCCCCCCCCHHHHHHHHHH
QLVAGALLLYPTWYDPYRDGLGEVEDTLGALEAQARSWREDRAGYTAIGMSRWKRGHLRA
HHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHCCCCCCC
GFGQHGPLDFADQPVAGRPTLVWAGKETSELQAACGDAHLLRMEDGFLRSRGLGADLVPP
CCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHCCCEEEEEECCCHHHHCCCCCCCCCH
LSLVLDDLGIYYDPTRESRLERLIAEAAALPPARLDRAERLIQTLRRTGLTKYNLPGGAL
HHHHHHHHCCEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCC
PDIPPDRPLVLIPGQVEDDASIRLGAGAITTNAALLAEARRLHPGAYLIYKPHPDVEAGL
CCCCCCCCEEEECCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCC
RIGVLPEEARHLADHIAETTGAEALLALSPHVITMTSAMGFEALIRGLPVTTLGAPFYAG
EEECCCHHHHHHHHHHHHHCCCCEEEEECCCEEEEEHHHHHHHHHHCCCCCCCCCCHHCC
WGLTTDLGDVPPRRTARPSLAALVHAALITYPRYMDPRTGLPCPVEIAVERLSSGEGMPS
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
KPILRIVAKLQIWLSGQSRLWRR
HHHHHHHHHHHEEECCCHHHCCC
>Mature Secondary Structure 
ALAGDSGTEPSEAPSAPRRRAYHYNAGFLTNTRVRRILALAGYDLKLGTPDAADDVIVW
CCCCCCCCCCCCCCCCCHHCEEEECCCCEEHHHHHHHHHHHCCCEECCCCCCCCCEEEE
GHSPYAPRGEAVADSTGAHLVRVEDAFLRSLRPGRSGEPPLGLVIDRRGMYFDATRASDL
CCCCCCCCCCCCCCCCCCEEEEECHHHHHHCCCCCCCCCCEEEEEECCCCEEECCCHHHH
EHILATHPFDDTALLNRARDVMARMAEGHLSKYAATDPALDPPAPGYVLLIDQTKGDASI
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCEE
QLGQATPDSFAEALTWAREDHPDAHIVVKTHPETRDGHRPGHFDPDGLPPNVSLDDRPIS
EECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
LWRMFEGARAVYTVTSQAGFEAILAGHKPVTFGVPFYAGWGLTDDRRPVPVRRQRVLTRA
HHHHHCCCCEEEEEECCCCCHHHHCCCCCEEECCCCEECCCCCCCCCCCCHHHHHHHHHH
QLVAGALLLYPTWYDPYRDGLGEVEDTLGALEAQARSWREDRAGYTAIGMSRWKRGHLRA
HHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHCCCCCCC
GFGQHGPLDFADQPVAGRPTLVWAGKETSELQAACGDAHLLRMEDGFLRSRGLGADLVPP
CCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHCCCEEEEEECCCHHHHCCCCCCCCCH
LSLVLDDLGIYYDPTRESRLERLIAEAAALPPARLDRAERLIQTLRRTGLTKYNLPGGAL
HHHHHHHHCCEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCC
PDIPPDRPLVLIPGQVEDDASIRLGAGAITTNAALLAEARRLHPGAYLIYKPHPDVEAGL
CCCCCCCCEEEECCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCC
RIGVLPEEARHLADHIAETTGAEALLALSPHVITMTSAMGFEALIRGLPVTTLGAPFYAG
EEECCCHHHHHHHHHHHHHCCCCEEEEECCCEEEEEHHHHHHHHHHCCCCCCCCCCHHCC
WGLTTDLGDVPPRRTARPSLAALVHAALITYPRYMDPRTGLPCPVEIAVERLSSGEGMPS
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
KPILRIVAKLQIWLSGQSRLWRR
HHHHHHHHHHHEEECCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8397187; 7875563 [H]