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The map label for this gene is kpsS [H]

Identifier: 89055909

GI number: 89055909

Start: 3464740

End: 3466029

Strand: Direct

Name: kpsS [H]

Synonym: Jann_3418

Alternate gene names: 89055909

Gene position: 3464740-3466029 (Clockwise)

Preceding gene: 89055902

Following gene: 89055910

Centisome position: 80.24

GC content: 64.5

Gene sequence:

>1290_bases
ATGGCTCCAAACCACGCCAACCGCGCGTTTTTGTTTCTGCAAGGCCCCCACGGGCCGTTCTTCTCACGTCTGGCCGAGAT
GGTGGCAAGCGCGGGCGCACAGGTCTGGCGCGTGGGTTTCAACCGCGGGGATGAGGCGTTCTGGCCCGACAAGGCCACCT
ACCTGCCCTTCACAGCCCCGGGCGAGACGTGGCCGGATCATGTGGCGGGCCTTCTGGACACCAAGGGGATCACGGATCTG
GTCCTTTACGGCGACACCCGCCCGATCCATGCCCAGGCCGTTGAACATGCCCGCGCGCGGGGCATCACCGTTCATGTGTT
CGAGGAAGGCTACCTGCGCCCCTATTGGGTGACGTATGAGCGGGGCGGCGCCAATGGCCATTCCCGCCTGATGGAGACTT
CCGTCCCGCAGATGCGCGCGGCCCTCAAGGACCTGGATCTGGACCTGCCCGATGCGCCCGCGAAATGGGGCGATATGCGC
CAGCACGTCTTCTACGGCGCGCTCTACCATTGGTTCGTGATGACCCGGAACCGGCGCTACGCGTCCTTTCGCCCACACCG
CACCCTGACTGTCGCCCAGGAATTCCGCCTCTATCTGCGTCGTCTGGCGCTGATGCCGTTTTTGTGGCTCGACCGGGTGC
TGGCCACCTACCGGATCAAGACCGGCGGCTTTCCCTATCATCTGGCACTTCTGCAACTGGCCCATGACGCCAGCTTCCGC
GACCATGGCCCATTTGAGGATATGTCCGAGTTTCTCGACGTCCTGATCGCGGGCTTCGCGGAGGGCGCGCCGTCCCACCA
TCACCTTGTTTTCAAGGCTCACCCGCTGGAAGATGGCCGCACGCCCGTCCGCGCCGATATCCGCCGCATCGCCGCGCATC
ACGGGGTCGCGGACCGGGTGCATTATGTGCGGGGCGGCAAACTCGCGCGCCTTCTGAACGACGCGCGCTCGGCGGTGACG
GTGAACTCCACCGCTGCGCAACAGGCGCTCTGGCGCGGACTTCCGCTCAAGGCGTTCGGGCAGGCCGTGTATCTCAAGCC
GGAATTTGTCTCCGATCAGCCCCTGCCTGCCTTTTTCCAGAACCCTACCCGCCCCGACAGCCGCGCCTACCGCGACTACC
GTCATTATCTGCTGGAAACCTCCCAGATCTCGGGCAGCTTCTATTCCGCCCGGGGGCGCCTGCAATTGCTCCGCCAGGTG
GTCGACATGATGCTCTCGTCCGAGGATGCCTATGATGCGCTTGACGCGGGCCGACCGGCACCAAGGCAACACCTTTCGCT
GGTGAAATAA

Upstream 100 bases:

>100_bases
AGACACGCCGACGTCACTTTTCGACCCGGAGGCTGACGTTCCCTTTTGCTCTTGTTAACCAAACCCGGCTAGACAGGCCG
GGACCGAAGGATGCTGCCCC

Downstream 100 bases:

>100_bases
GCCCCTCCTTGCAAAGGGCTTTCCCGAAACGGGCTTTTTAGCTAGTCTGCCAAAAAACGAGACAAAAATATCTGAGGCAG
TTCAGGCTAAAGGAGCCATC

Product: capsule polysaccharide biosynthesis

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 428

Protein sequence:

>429_residues
MAPNHANRAFLFLQGPHGPFFSRLAEMVASAGAQVWRVGFNRGDEAFWPDKATYLPFTAPGETWPDHVAGLLDTKGITDL
VLYGDTRPIHAQAVEHARARGITVHVFEEGYLRPYWVTYERGGANGHSRLMETSVPQMRAALKDLDLDLPDAPAKWGDMR
QHVFYGALYHWFVMTRNRRYASFRPHRTLTVAQEFRLYLRRLALMPFLWLDRVLATYRIKTGGFPYHLALLQLAHDASFR
DHGPFEDMSEFLDVLIAGFAEGAPSHHHLVFKAHPLEDGRTPVRADIRRIAAHHGVADRVHYVRGGKLARLLNDARSAVT
VNSTAAQQALWRGLPLKAFGQAVYLKPEFVSDQPLPAFFQNPTRPDSRAYRDYRHYLLETSQISGSFYSARGRLQLLRQV
VDMMLSSEDAYDALDAGRPAPRQHLSLVK

Sequences:

>Translated_429_residues
MAPNHANRAFLFLQGPHGPFFSRLAEMVASAGAQVWRVGFNRGDEAFWPDKATYLPFTAPGETWPDHVAGLLDTKGITDL
VLYGDTRPIHAQAVEHARARGITVHVFEEGYLRPYWVTYERGGANGHSRLMETSVPQMRAALKDLDLDLPDAPAKWGDMR
QHVFYGALYHWFVMTRNRRYASFRPHRTLTVAQEFRLYLRRLALMPFLWLDRVLATYRIKTGGFPYHLALLQLAHDASFR
DHGPFEDMSEFLDVLIAGFAEGAPSHHHLVFKAHPLEDGRTPVRADIRRIAAHHGVADRVHYVRGGKLARLLNDARSAVT
VNSTAAQQALWRGLPLKAFGQAVYLKPEFVSDQPLPAFFQNPTRPDSRAYRDYRHYLLETSQISGSFYSARGRLQLLRQV
VDMMLSSEDAYDALDAGRPAPRQHLSLVK
>Mature_428_residues
APNHANRAFLFLQGPHGPFFSRLAEMVASAGAQVWRVGFNRGDEAFWPDKATYLPFTAPGETWPDHVAGLLDTKGITDLV
LYGDTRPIHAQAVEHARARGITVHVFEEGYLRPYWVTYERGGANGHSRLMETSVPQMRAALKDLDLDLPDAPAKWGDMRQ
HVFYGALYHWFVMTRNRRYASFRPHRTLTVAQEFRLYLRRLALMPFLWLDRVLATYRIKTGGFPYHLALLQLAHDASFRD
HGPFEDMSEFLDVLIAGFAEGAPSHHHLVFKAHPLEDGRTPVRADIRRIAAHHGVADRVHYVRGGKLARLLNDARSAVTV
NSTAAQQALWRGLPLKAFGQAVYLKPEFVSDQPLPAFFQNPTRPDSRAYRDYRHYLLETSQISGSFYSARGRLQLLRQVV
DMMLSSEDAYDALDAGRPAPRQHLSLVK

Specific function: Unknown

COG id: COG3562

COG function: function code M; Capsule polysaccharide export protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007833 [H]

Pfam domain/function: PF05159 Capsule_synth [H]

EC number: NA

Molecular weight: Translated: 48676; Mature: 48545

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPNHANRAFLFLQGPHGPFFSRLAEMVASAGAQVWRVGFNRGDEAFWPDKATYLPFTAP
CCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCC
GETWPDHVAGLLDTKGITDLVLYGDTRPIHAQAVEHARARGITVHVFEEGYLRPYWVTYE
CCCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEE
RGGANGHSRLMETSVPQMRAALKDLDLDLPDAPAKWGDMRQHVFYGALYHWFVMTRNRRY
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
ASFRPHRTLTVAQEFRLYLRRLALMPFLWLDRVLATYRIKTGGFPYHLALLQLAHDASFR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHCCCCC
DHGPFEDMSEFLDVLIAGFAEGAPSHHHLVFKAHPLEDGRTPVRADIRRIAAHHGVADRV
CCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHH
HYVRGGKLARLLNDARSAVTVNSTAAQQALWRGLPLKAFGQAVYLKPEFVSDQPLPAFFQ
HHHCCCHHHHHHHHHHHEEEECHHHHHHHHHCCCCHHHHCCEEEECCCCCCCCCCHHHHC
NPTRPDSRAYRDYRHYLLETSQISGSFYSARGRLQLLRQVVDMMLSSEDAYDALDAGRPA
CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCC
PRQHLSLVK
CHHHHCCCC
>Mature Secondary Structure 
APNHANRAFLFLQGPHGPFFSRLAEMVASAGAQVWRVGFNRGDEAFWPDKATYLPFTAP
CCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCC
GETWPDHVAGLLDTKGITDLVLYGDTRPIHAQAVEHARARGITVHVFEEGYLRPYWVTYE
CCCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEE
RGGANGHSRLMETSVPQMRAALKDLDLDLPDAPAKWGDMRQHVFYGALYHWFVMTRNRRY
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
ASFRPHRTLTVAQEFRLYLRRLALMPFLWLDRVLATYRIKTGGFPYHLALLQLAHDASFR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHCCCCC
DHGPFEDMSEFLDVLIAGFAEGAPSHHHLVFKAHPLEDGRTPVRADIRRIAAHHGVADRV
CCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHH
HYVRGGKLARLLNDARSAVTVNSTAAQQALWRGLPLKAFGQAVYLKPEFVSDQPLPAFFQ
HHHCCCHHHHHHHHHHHEEEECHHHHHHHHHCCCCHHHHCCEEEECCCCCCCCCCHHHHC
NPTRPDSRAYRDYRHYLLETSQISGSFYSARGRLQLLRQVVDMMLSSEDAYDALDAGRPA
CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCC
PRQHLSLVK
CHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8397187; 1735705 [H]