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The map label for this gene is 89055554

Identifier: 89055554

GI number: 89055554

Start: 3096248

End: 3097426

Strand: Direct

Name: 89055554

Synonym: Jann_3063

Alternate gene names: NA

Gene position: 3096248-3097426 (Clockwise)

Preceding gene: 89055553

Following gene: 89055555

Centisome position: 71.71

GC content: 67.77

Gene sequence:

>1179_bases
ATGATCCGCTTTGAGGCCGATTACCTGATTGAGACACCCGGCGATCCGCAGGCGGCGACGGAGACGATGGCGGGCGAGCA
ATCCTCCGGCACCTTCGTATCGGTCCCCGGCGAGACAGCGGAATTGAAAGAGCGTGCCGCCGCGCGCGTGGAGCGACTGG
AGGACCTTGGCGAGGTGCCCGCCCCCTCCCTGCCAACGCCGGGCGCTGCGGGCGCGCAGCGGCGGGCGCGGGTTACCCTG
TCCTGGCCGATGGATAGCATCGGCGCCTCTCTGCCAAATCTGATGACGACTGTGGGGGGGAACCTTTTCGAGCTGCGCGC
TTTCTCTGGGCTGCGGGTAGAAGACATCCGCCTGCCTGCGGCATTTGCAGCAGCGGGACCTGGGCCACGCTTTGGCCCGG
ACGGCACGCGGCGTTTGGCGGGCGTGGAAAAGGGCCCCTTAATCGGAACCATCGTAAAGCCATCCGTCGGCCTGTCGCCA
GAGAACACGGCAGGCCTCGTCGCCGAGATGGCCGAGGCGGGCCTTGATTTCATCAAGGATGACGAGTTGCAGGCTGACGG
CCCCGCCTGCCCGTTCGACGCCCGTGTCCGCGCGGTCATGGATGTCCTCAACCGGCACGCGGACCGGACCGGAAAAAAGG
TGATGTATGCGTTCAATCTGACCGGAGAGGTGGACGAGATGCGGCGTCGACACGACCTCGTCCGCGATCTGGGTGGCACG
TGTGTGATGGTGTCGATGCTCCCTGTCGGCCTCTCCGGGTTCCTGGCGCTGTCGCGTCACGCCGACCTGCCGATCCACGC
GCACCGGAACGGATGGGGCGCTCTGTCGCGGCATCCCGCGCTTGGCTGGTCCTATGTGGCATTCTCGAAGCTGTGGCGAT
TGGCCGGGGCCGACCATCTGCACGTCAACGGCCTGTCCAACAAGTTCTGCGAGCCCGACGAAAGCGTCACTGCGTCCGCG
CGCGCCTGCCTGTCCCCGCTGATGGAAGGCCATCCGATGCTTGCGATGCCGGTGTTTTCCTCCGGCCAGACGGCGGCGCA
GGCCGCCCCAACGCTGGCCGCGCTCGGCTCCGCCGATCTGATCCACGCCGCCGGCGGTGGCATCCTCGGCCACCCTGACG
GGCCCCGGGCCGGGGTCGCGGCGATGCGGTCTGCCTGGGCCGAGGCGATGCACGGATGA

Upstream 100 bases:

>100_bases
AGCCGTCGGGCGCGGACAATCTGCGGACGCTGGCGCTGGCACTGGCCGCCTACGACGCTGCGGAAGACCGCCGCACCATC
GCGATGGAGGGACAGGCTTG

Downstream 100 bases:

>100_bases
CTGTGCCGCGCCTCGCCTGGTATGGCGACGATTTCACCGGGTCCGCCGCCGTCATGGACGAGCTGGCGCAGGCCGGGCTG
ACGGCCGTTCTGTTCACACG

Product: RuBisCO-like protein

Products: 3-phospho-D-glycerate; H+

Alternate protein names: RuBisCO-like protein [H]

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MIRFEADYLIETPGDPQAATETMAGEQSSGTFVSVPGETAELKERAAARVERLEDLGEVPAPSLPTPGAAGAQRRARVTL
SWPMDSIGASLPNLMTTVGGNLFELRAFSGLRVEDIRLPAAFAAAGPGPRFGPDGTRRLAGVEKGPLIGTIVKPSVGLSP
ENTAGLVAEMAEAGLDFIKDDELQADGPACPFDARVRAVMDVLNRHADRTGKKVMYAFNLTGEVDEMRRRHDLVRDLGGT
CVMVSMLPVGLSGFLALSRHADLPIHAHRNGWGALSRHPALGWSYVAFSKLWRLAGADHLHVNGLSNKFCEPDESVTASA
RACLSPLMEGHPMLAMPVFSSGQTAAQAAPTLAALGSADLIHAAGGGILGHPDGPRAGVAAMRSAWAEAMHG

Sequences:

>Translated_392_residues
MIRFEADYLIETPGDPQAATETMAGEQSSGTFVSVPGETAELKERAAARVERLEDLGEVPAPSLPTPGAAGAQRRARVTL
SWPMDSIGASLPNLMTTVGGNLFELRAFSGLRVEDIRLPAAFAAAGPGPRFGPDGTRRLAGVEKGPLIGTIVKPSVGLSP
ENTAGLVAEMAEAGLDFIKDDELQADGPACPFDARVRAVMDVLNRHADRTGKKVMYAFNLTGEVDEMRRRHDLVRDLGGT
CVMVSMLPVGLSGFLALSRHADLPIHAHRNGWGALSRHPALGWSYVAFSKLWRLAGADHLHVNGLSNKFCEPDESVTASA
RACLSPLMEGHPMLAMPVFSSGQTAAQAAPTLAALGSADLIHAAGGGILGHPDGPRAGVAAMRSAWAEAMHG
>Mature_392_residues
MIRFEADYLIETPGDPQAATETMAGEQSSGTFVSVPGETAELKERAAARVERLEDLGEVPAPSLPTPGAAGAQRRARVTL
SWPMDSIGASLPNLMTTVGGNLFELRAFSGLRVEDIRLPAAFAAAGPGPRFGPDGTRRLAGVEKGPLIGTIVKPSVGLSP
ENTAGLVAEMAEAGLDFIKDDELQADGPACPFDARVRAVMDVLNRHADRTGKKVMYAFNLTGEVDEMRRRHDLVRDLGGT
CVMVSMLPVGLSGFLALSRHADLPIHAHRNGWGALSRHPALGWSYVAFSKLWRLAGADHLHVNGLSNKFCEPDESVTASA
RACLSPLMEGHPMLAMPVFSSGQTAAQAAPTLAALGSADLIHAAGGGILGHPDGPRAGVAAMRSAWAEAMHG

Specific function: May be involved in sulfur metabolism and oxidative stress response. Does not show RuBisCO activity [H]

COG id: COG1850

COG function: function code G; Ribulose 1,5-bisphosphate carboxylase, large subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RuBisCO large chain family. Type IV subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020878
- InterPro:   IPR000685
- InterPro:   IPR017443 [H]

Pfam domain/function: PF00016 RuBisCO_large [H]

EC number: 4.1.1.39

Molecular weight: Translated: 41186; Mature: 41186

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS00157 RUBISCO_LARGE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRFEADYLIETPGDPQAATETMAGEQSSGTFVSVPGETAELKERAAARVERLEDLGEVP
CEEECCCEEEECCCCCHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCC
APSLPTPGAAGAQRRARVTLSWPMDSIGASLPNLMTTVGGNLFELRAFSGLRVEDIRLPA
CCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCEEEEHHCCCCEEEEEECCH
AFAAAGPGPRFGPDGTRRLAGVEKGPLIGTIVKPSVGLSPENTAGLVAEMAEAGLDFIKD
HHHCCCCCCCCCCCHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCHHCC
DELQADGPACPFDARVRAVMDVLNRHADRTGKKVMYAFNLTGEVDEMRRRHDLVRDLGGT
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCC
CVMVSMLPVGLSGFLALSRHADLPIHAHRNGWGALSRHPALGWSYVAFSKLWRLAGADHL
EEEEHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEE
HVNGLSNKFCEPDESVTASARACLSPLMEGHPMLAMPVFSSGQTAAQAAPTLAALGSADL
EECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHCCHHHHHCCCCE
IHAAGGGILGHPDGPRAGVAAMRSAWAEAMHG
EECCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIRFEADYLIETPGDPQAATETMAGEQSSGTFVSVPGETAELKERAAARVERLEDLGEVP
CEEECCCEEEECCCCCHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCC
APSLPTPGAAGAQRRARVTLSWPMDSIGASLPNLMTTVGGNLFELRAFSGLRVEDIRLPA
CCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCEEEEHHCCCCEEEEEECCH
AFAAAGPGPRFGPDGTRRLAGVEKGPLIGTIVKPSVGLSPENTAGLVAEMAEAGLDFIKD
HHHCCCCCCCCCCCHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCHHCC
DELQADGPACPFDARVRAVMDVLNRHADRTGKKVMYAFNLTGEVDEMRRRHDLVRDLGGT
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCC
CVMVSMLPVGLSGFLALSRHADLPIHAHRNGWGALSRHPALGWSYVAFSKLWRLAGADHL
EEEEHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEE
HVNGLSNKFCEPDESVTASARACLSPLMEGHPMLAMPVFSSGQTAAQAAPTLAALGSADL
EECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHCCHHHHHCCCCE
IHAAGGGILGHPDGPRAGVAAMRSAWAEAMHG
EECCCCCCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: D-ribulose 1,5-bisphosphate; CO2; H2O

Specific reaction: D-ribulose 1,5-bisphosphate + CO2 + H2O = 2 3-phospho-D-glycerate + 2 H+

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12910271 [H]