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The map label for this gene is yrbE [H]

Identifier: 89055553

GI number: 89055553

Start: 3095217

End: 3096248

Strand: Direct

Name: yrbE [H]

Synonym: Jann_3062

Alternate gene names: 89055553

Gene position: 3095217-3096248 (Clockwise)

Preceding gene: 89055552

Following gene: 89055554

Centisome position: 71.68

GC content: 63.76

Gene sequence:

>1032_bases
ATGAAAACCATGAATGGTGCCCTGATCGGATGCGGCTTCTTCGCTGAAAATCATATGCATGCCTGGGCCGGGTTAGAGGG
TGCGCGGATCGTGGCGCTGTGCGACCGCGACGTCGACAAGGCGCAGGCAATGGCCAAAAAGTTCGGGATCGACCAAGTGT
TCAGCGATGCCGATGACCTGTTCGCCGAAGTCTCGCTGGATTTCGTGGATGTGGCGACCACCGCGGCCTCTCACCGTCCG
CTGGTCGAGACAGCCGTGCGGCATGCGCCGACCGTCATCTGCCAGAAACCCTTTGCGGAAACGCTGGAGGATGCGAGAGC
CATGGTGGCAGCGGCACAGACCGCGGGCACCCAGCTGATCGTGCACGAGAATTTCCGCTGGCAGCGCCCGTTCGTGAAGA
TCAAGGACCTCATCACGGCAGGACAGATCGGGGCGCCACATTGGGCGCGTTTTTCCTTTCGCCACGGCTACGACAACTAC
GTCAACCAGCCCTATCTGGCCGAAATCGAGCGCTTTACGATCATGGATGTCGGCCTGCATCTGTTCGACCTCGCGCGGCA
CATCATGGGCGAGGTGACCGACCTGTCCTGCACCACCCAACGGCTGAACCAGGTCGTGCGTGGCGAAGACGCCTTTACCG
CCCTACTGGCCCATGACAGCGGGGCAACGAGCGTCTGCGACTGCTCTTTCTGGACGAAACTCGACCCCGATCCGTTTCCG
CGAACCCTGGCGCAGATCGAAGGGGCGAAGGGCACGATCATGCTCGACGCGGATTTTCGCCTCACATTGCACACGGACGG
GGCGCATACCATCACGGCGGCCGAACCCGAGGTGCCGCCCTGGGGAGCGCGCCCCTGGCATGGCGTTCAGGACAGCGTGA
TCCGGTTCCAGGCCCACGCCCTGCGCGTGATGCGCGGCGAAGACACGCCGCAGCCGTCGGGCGCGGACAATCTGCGGACG
CTGGCGCTGGCACTGGCCGCCTACGACGCTGCGGAAGACCGCCGCACCATCGCGATGGAGGGACAGGCTTGA

Upstream 100 bases:

>100_bases
TCACTGGAACGCCACCCGGTCCCCTGCGCATCGAAGCAAGCGGCGATGTCATATCCCTTGATGCGGCGGACGCGGCCCCG
AAACTAGAAGGTTTCTCCCC

Downstream 100 bases:

>100_bases
TGATCCGCTTTGAGGCCGATTACCTGATTGAGACACCCGGCGATCCGCAGGCGGCGACGGAGACGATGGCGGGCGAGCAA
TCCTCCGGCACCTTCGTATC

Product: oxidoreductase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MKTMNGALIGCGFFAENHMHAWAGLEGARIVALCDRDVDKAQAMAKKFGIDQVFSDADDLFAEVSLDFVDVATTAASHRP
LVETAVRHAPTVICQKPFAETLEDARAMVAAAQTAGTQLIVHENFRWQRPFVKIKDLITAGQIGAPHWARFSFRHGYDNY
VNQPYLAEIERFTIMDVGLHLFDLARHIMGEVTDLSCTTQRLNQVVRGEDAFTALLAHDSGATSVCDCSFWTKLDPDPFP
RTLAQIEGAKGTIMLDADFRLTLHTDGAHTITAAEPEVPPWGARPWHGVQDSVIRFQAHALRVMRGEDTPQPSGADNLRT
LALALAAYDAAEDRRTIAMEGQA

Sequences:

>Translated_343_residues
MKTMNGALIGCGFFAENHMHAWAGLEGARIVALCDRDVDKAQAMAKKFGIDQVFSDADDLFAEVSLDFVDVATTAASHRP
LVETAVRHAPTVICQKPFAETLEDARAMVAAAQTAGTQLIVHENFRWQRPFVKIKDLITAGQIGAPHWARFSFRHGYDNY
VNQPYLAEIERFTIMDVGLHLFDLARHIMGEVTDLSCTTQRLNQVVRGEDAFTALLAHDSGATSVCDCSFWTKLDPDPFP
RTLAQIEGAKGTIMLDADFRLTLHTDGAHTITAAEPEVPPWGARPWHGVQDSVIRFQAHALRVMRGEDTPQPSGADNLRT
LALALAAYDAAEDRRTIAMEGQA
>Mature_343_residues
MKTMNGALIGCGFFAENHMHAWAGLEGARIVALCDRDVDKAQAMAKKFGIDQVFSDADDLFAEVSLDFVDVATTAASHRP
LVETAVRHAPTVICQKPFAETLEDARAMVAAAQTAGTQLIVHENFRWQRPFVKIKDLITAGQIGAPHWARFSFRHGYDNY
VNQPYLAEIERFTIMDVGLHLFDLARHIMGEVTDLSCTTQRLNQVVRGEDAFTALLAHDSGATSVCDCSFWTKLDPDPFP
RTLAQIEGAKGTIMLDADFRLTLHTDGAHTITAAEPEVPPWGARPWHGVQDSVIRFQAHALRVMRGEDTPQPSGADNLRT
LALALAAYDAAEDRRTIAMEGQA

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87081947, Length=220, Percent_Identity=25.9090909090909, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1787574, Length=190, Percent_Identity=26.3157894736842, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 37727; Mature: 37727

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTMNGALIGCGFFAENHMHAWAGLEGARIVALCDRDVDKAQAMAKKFGIDQVFSDADDL
CCCCCCEEEEEEEHHCCCCHHHCCCCCCEEEEEECCCHHHHHHHHHHHCHHHHHCCHHHH
FAEVSLDFVDVATTAASHRPLVETAVRHAPTVICQKPFAETLEDARAMVAAAQTAGTQLI
HHHHCCHHHHHHHHHCCCCCHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHCCCEEE
VHENFRWQRPFVKIKDLITAGQIGAPHWARFSFRHGYDNYVNQPYLAEIERFTIMDVGLH
EECCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCHHHCCCCHHHHHHHHHHHHHHHH
LFDLARHIMGEVTDLSCTTQRLNQVVRGEDAFTALLAHDSGATSVCDCSFWTKLDPDPFP
HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHEEEEECCCCCCCEECCCCCCCCCCCCCH
RTLAQIEGAKGTIMLDADFRLTLHTDGAHTITAAEPEVPPWGARPWHGVQDSVIRFQAHA
HHHHHHCCCCCEEEEECCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH
LRVMRGEDTPQPSGADNLRTLALALAAYDAAEDRRTIAMEGQA
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCC
>Mature Secondary Structure
MKTMNGALIGCGFFAENHMHAWAGLEGARIVALCDRDVDKAQAMAKKFGIDQVFSDADDL
CCCCCCEEEEEEEHHCCCCHHHCCCCCCEEEEEECCCHHHHHHHHHHHCHHHHHCCHHHH
FAEVSLDFVDVATTAASHRPLVETAVRHAPTVICQKPFAETLEDARAMVAAAQTAGTQLI
HHHHCCHHHHHHHHHCCCCCHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHCCCEEE
VHENFRWQRPFVKIKDLITAGQIGAPHWARFSFRHGYDNYVNQPYLAEIERFTIMDVGLH
EECCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCHHHCCCCHHHHHHHHHHHHHHHH
LFDLARHIMGEVTDLSCTTQRLNQVVRGEDAFTALLAHDSGATSVCDCSFWTKLDPDPFP
HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHEEEEECCCCCCCEECCCCCCCCCCCCCH
RTLAQIEGAKGTIMLDADFRLTLHTDGAHTITAAEPEVPPWGARPWHGVQDSVIRFQAHA
HHHHHHCCCCCEEEEECCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH
LRVMRGEDTPQPSGADNLRTLALALAAYDAAEDRRTIAMEGQA
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9025289 [H]