Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055552

Identifier: 89055552

GI number: 89055552

Start: 3093427

End: 3095220

Strand: Direct

Name: 89055552

Synonym: Jann_3061

Alternate gene names: NA

Gene position: 3093427-3095220 (Clockwise)

Preceding gene: 89055546

Following gene: 89055553

Centisome position: 71.64

GC content: 64.33

Gene sequence:

>1794_bases
ATGGCAATACCTGCGCCGGCCAATATGGTCTTGCAAAATTTCATAACGGTCTTCCTCCCTAGTTGGCGGGCCGGTCAAAT
TACGACTTGGCCTACTCATCAACTTATCATACCAGTAGAACATCCGCGCAAGCCTTTCATTCGCCAAGACAGCAAAAAGA
GGACCCATCAAGGCATGAAGGATGAGATTTTTCAGGTCGGCGAACTCACCTATCGGTTGCAGGATGGATGTCTGCGGAGC
CTTTCCTGGAAAGGCTTTGAGGCGGTTCGCGGCCTGTCCGCGGCGATCCGGGACACGGCCTGGGGCACCCTGCCCGAAGA
CGCGATGCCGTGGCACCACGAGACCGGACCTGGCCGGGCTTCTCATGTCCGGACCTTTGCCGTTCAGGACGGAGCCGTGA
CCGGAAAACTGCGAATCGCGGCACATGCGAACGGCCGATTGGAGGCGGATCTGAGCCTGACTGCGCACACTGAATTCAGG
ACGAACCGCGCCGGATTTTGCCTGCTGCACCCGCTGCGTGGCGTCGTGGGCCAGCCCTTCACCGCAACGTCTCCGGACGG
AACCGACCAGAACCTGATGTTCCCCGAGCGCATTTCGCCCGGGCAGCCGGCGCTGAACCTCGCGGGTCTTCGGCACACCG
TTCAAGGTGTCGACGTCGACATTGCGATGGAGGGCGAGGTGTTTGAAATGGAGGACCAGCGCAATTGGTCAGACGCGTCG
TTCAAGACATATTGCCGACCGCTGTCAAAACCGCTGCCCCAGGTGATCGCTGCGGGCGAAACCATTCATCAGCGCGTCGT
CATCCAGCTGTCGGGTGATCCGGTAGATAGCACAACGCCGGTTGACGAACAGTCGACAGTCACGATGCCGGAAGTCCTGA
TTGCCGTAGAGCCGGATTGGCTGCCCGCGGGTCCCCTGCACGGCAATGCCGCCCTTGTCAGGTGGGCGCCCGACGCGGCA
TGGACGGCGGCGACGCTTGCACGGCTTGGCACAGCACTCGGCCATCGACCGCTGGATCTGGAAATCGTCATCCCTGAAGG
CTCCCACCCCGAGGACGTTGTGGATGGGGTCGCAGCGGATCTGGCCGAGGCGGGCCTTACTGCGCGGCACGTCATCGCGC
TGCCTGCTGCCTACCTGCAAAGCCATCAGCCGACAGGGCCTTGGCCAGACGGCCCCACACCTGAGCAGGCGCGGGACGCC
GCACGCGCCGCCTTTCCCCACGCGCGGATCGGCACAGGTATGCTGACCAATTTCACGGAGTTGAACCGCCGCCCGCCGGA
CGGAGGCGACTACATCACCCACGCAAACAGCGCTATCGTTCATGCCGCCGACGACGGGTCCGTTCTGGAAACGCTGGAGG
CTATCCCGGACGTTTGCGCCTCAGCCGCCGCCATCGCCGGGGACAGGCCGCTGCGGCTGGGCCTGATGGCCATCGGGATG
CGCTCGAACCCCTACGGCGTCGGGCTGGTGCCCAACCCCGGTGGCGCACGGATCACGATGACCGACAGCGACCCCCGCCA
GAGCGCGCCCTTCGCCGCAGCCTATGCAACGGCTGTCTGCGCCCTTGCGGCGCGCGCCGGGATCGAGGCGGTAACGCTCG
CCGCCGCCGCCGGACCCCTGGGCGCAGAGGGACGGCCAATCGGCAGAACCATTGATGCGCTCGCCGCCCTGGCGGGCCAA
AAAGCGCGTATCACTGGAACGCCACCCGGTCCCCTGCGCATCGAAGCAAGCGGCGATGTCATATCCCTTGATGCGGCGGA
CGCGGCCCCGAAACTAGAAGGTTTCTCCCCATGA

Upstream 100 bases:

>100_bases
CGCCGCATGTCCCGCGACCCAGAATTCGGTTTCGAGCGTCTGATACGCAAAACAGATCGTCAGATCTTCGTTCTGCGCAA
AGGCCGGTGCGGCCAGGCCG

Downstream 100 bases:

>100_bases
AAACCATGAATGGTGCCCTGATCGGATGCGGCTTCTTCGCTGAAAATCATATGCATGCCTGGGCCGGGTTAGAGGGTGCG
CGGATCGTGGCGCTGTGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 597; Mature: 596

Protein sequence:

>597_residues
MAIPAPANMVLQNFITVFLPSWRAGQITTWPTHQLIIPVEHPRKPFIRQDSKKRTHQGMKDEIFQVGELTYRLQDGCLRS
LSWKGFEAVRGLSAAIRDTAWGTLPEDAMPWHHETGPGRASHVRTFAVQDGAVTGKLRIAAHANGRLEADLSLTAHTEFR
TNRAGFCLLHPLRGVVGQPFTATSPDGTDQNLMFPERISPGQPALNLAGLRHTVQGVDVDIAMEGEVFEMEDQRNWSDAS
FKTYCRPLSKPLPQVIAAGETIHQRVVIQLSGDPVDSTTPVDEQSTVTMPEVLIAVEPDWLPAGPLHGNAALVRWAPDAA
WTAATLARLGTALGHRPLDLEIVIPEGSHPEDVVDGVAADLAEAGLTARHVIALPAAYLQSHQPTGPWPDGPTPEQARDA
ARAAFPHARIGTGMLTNFTELNRRPPDGGDYITHANSAIVHAADDGSVLETLEAIPDVCASAAAIAGDRPLRLGLMAIGM
RSNPYGVGLVPNPGGARITMTDSDPRQSAPFAAAYATAVCALAARAGIEAVTLAAAAGPLGAEGRPIGRTIDALAALAGQ
KARITGTPPGPLRIEASGDVISLDAADAAPKLEGFSP

Sequences:

>Translated_597_residues
MAIPAPANMVLQNFITVFLPSWRAGQITTWPTHQLIIPVEHPRKPFIRQDSKKRTHQGMKDEIFQVGELTYRLQDGCLRS
LSWKGFEAVRGLSAAIRDTAWGTLPEDAMPWHHETGPGRASHVRTFAVQDGAVTGKLRIAAHANGRLEADLSLTAHTEFR
TNRAGFCLLHPLRGVVGQPFTATSPDGTDQNLMFPERISPGQPALNLAGLRHTVQGVDVDIAMEGEVFEMEDQRNWSDAS
FKTYCRPLSKPLPQVIAAGETIHQRVVIQLSGDPVDSTTPVDEQSTVTMPEVLIAVEPDWLPAGPLHGNAALVRWAPDAA
WTAATLARLGTALGHRPLDLEIVIPEGSHPEDVVDGVAADLAEAGLTARHVIALPAAYLQSHQPTGPWPDGPTPEQARDA
ARAAFPHARIGTGMLTNFTELNRRPPDGGDYITHANSAIVHAADDGSVLETLEAIPDVCASAAAIAGDRPLRLGLMAIGM
RSNPYGVGLVPNPGGARITMTDSDPRQSAPFAAAYATAVCALAARAGIEAVTLAAAAGPLGAEGRPIGRTIDALAALAGQ
KARITGTPPGPLRIEASGDVISLDAADAAPKLEGFSP
>Mature_596_residues
AIPAPANMVLQNFITVFLPSWRAGQITTWPTHQLIIPVEHPRKPFIRQDSKKRTHQGMKDEIFQVGELTYRLQDGCLRSL
SWKGFEAVRGLSAAIRDTAWGTLPEDAMPWHHETGPGRASHVRTFAVQDGAVTGKLRIAAHANGRLEADLSLTAHTEFRT
NRAGFCLLHPLRGVVGQPFTATSPDGTDQNLMFPERISPGQPALNLAGLRHTVQGVDVDIAMEGEVFEMEDQRNWSDASF
KTYCRPLSKPLPQVIAAGETIHQRVVIQLSGDPVDSTTPVDEQSTVTMPEVLIAVEPDWLPAGPLHGNAALVRWAPDAAW
TAATLARLGTALGHRPLDLEIVIPEGSHPEDVVDGVAADLAEAGLTARHVIALPAAYLQSHQPTGPWPDGPTPEQARDAA
RAAFPHARIGTGMLTNFTELNRRPPDGGDYITHANSAIVHAADDGSVLETLEAIPDVCASAAAIAGDRPLRLGLMAIGMR
SNPYGVGLVPNPGGARITMTDSDPRQSAPFAAAYATAVCALAARAGIEAVTLAAAAGPLGAEGRPIGRTIDALAALAGQK
ARITGTPPGPLRIEASGDVISLDAADAAPKLEGFSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63273; Mature: 63142

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIPAPANMVLQNFITVFLPSWRAGQITTWPTHQLIIPVEHPRKPFIRQDSKKRTHQGMK
CCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEECCCCCCCCCCCCHHHHHHCCHH
DEIFQVGELTYRLQDGCLRSLSWKGFEAVRGLSAAIRDTAWGTLPEDAMPWHHETGPGRA
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCH
SHVRTFAVQDGAVTGKLRIAAHANGRLEADLSLTAHTEFRTNRAGFCLLHPLRGVVGQPF
HHEEEEEEECCCEEEEEEEEEECCCEEEEEEEEEEECCCCCCCCCEEEEEHHHHHCCCCC
TATSPDGTDQNLMFPERISPGQPALNLAGLRHTVQGVDVDIAMEGEVFEMEDQRNWSDAS
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCEEEECCCCCCCCCH
FKTYCRPLSKPLPQVIAAGETIHQRVVIQLSGDPVDSTTPVDEQSTVTMPEVLIAVEPDW
HHHHHHHHCCHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCEECCEEEEEECCCC
LPAGPLHGNAALVRWAPDAAWTAATLARLGTALGHRPLDLEIVIPEGSHPEDVVDGVAAD
CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHH
LAEAGLTARHVIALPAAYLQSHQPTGPWPDGPTPEQARDAARAAFPHARIGTGMLTNFTE
HHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHCCCCHHHHHHH
LNRRPPDGGDYITHANSAIVHAADDGSVLETLEAIPDVCASAAAIAGDRPLRLGLMAIGM
HCCCCCCCCCEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEC
RSNPYGVGLVPNPGGARITMTDSDPRQSAPFAAAYATAVCALAARAGIEAVTLAAAAGPL
CCCCEEEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEHHCCCC
GAEGRPIGRTIDALAALAGQKARITGTPPGPLRIEASGDVISLDAADAAPKLEGFSP
CCCCCCCHHHHHHHHHHCCCCEEEECCCCCCEEEECCCCEEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
AIPAPANMVLQNFITVFLPSWRAGQITTWPTHQLIIPVEHPRKPFIRQDSKKRTHQGMK
CCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEECCCCCCCCCCCCHHHHHHCCHH
DEIFQVGELTYRLQDGCLRSLSWKGFEAVRGLSAAIRDTAWGTLPEDAMPWHHETGPGRA
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCH
SHVRTFAVQDGAVTGKLRIAAHANGRLEADLSLTAHTEFRTNRAGFCLLHPLRGVVGQPF
HHEEEEEEECCCEEEEEEEEEECCCEEEEEEEEEEECCCCCCCCCEEEEEHHHHHCCCCC
TATSPDGTDQNLMFPERISPGQPALNLAGLRHTVQGVDVDIAMEGEVFEMEDQRNWSDAS
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCEEEECCCCCCCCCH
FKTYCRPLSKPLPQVIAAGETIHQRVVIQLSGDPVDSTTPVDEQSTVTMPEVLIAVEPDW
HHHHHHHHCCHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCEECCEEEEEECCCC
LPAGPLHGNAALVRWAPDAAWTAATLARLGTALGHRPLDLEIVIPEGSHPEDVVDGVAAD
CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHH
LAEAGLTARHVIALPAAYLQSHQPTGPWPDGPTPEQARDAARAAFPHARIGTGMLTNFTE
HHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHCCCCHHHHHHH
LNRRPPDGGDYITHANSAIVHAADDGSVLETLEAIPDVCASAAAIAGDRPLRLGLMAIGM
HCCCCCCCCCEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEC
RSNPYGVGLVPNPGGARITMTDSDPRQSAPFAAAYATAVCALAARAGIEAVTLAAAAGPL
CCCCEEEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEHHCCCC
GAEGRPIGRTIDALAALAGQKARITGTPPGPLRIEASGDVISLDAADAAPKLEGFSP
CCCCCCCHHHHHHHHHHCCCCEEEECCCCCCEEEECCCCEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA