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The map label for this gene is nrtC [H]

Identifier: 89055530

GI number: 89055530

Start: 3064838

End: 3066007

Strand: Direct

Name: nrtC [H]

Synonym: Jann_3039

Alternate gene names: 89055530

Gene position: 3064838-3066007 (Clockwise)

Preceding gene: 89055529

Following gene: 89055531

Centisome position: 70.98

GC content: 63.85

Gene sequence:

>1170_bases
ATGAAGACAACCTCCGTACCCGTGGCCTACATGCCGTTGATCGACGCTGCACCTCTGATTGTAGGACAGGAGATGGGATT
TGCGGAGGCTGAAGGCATTTCTCTAGAGCTGATCGCCGCGCCCTCATGGTCCTCTGTCCGCGATATGCTGGCGTTCGGGC
GCGTGGATTTGGCGCATTTGCTGTCCGTCGTGCCGGTTGCCATGGCGCTTAGGTTGGGCGGCGTCACAAACCCGATGTCC
GCCGTCTCGGTGCTGTCGGTCAACGGCAACGTCATTGGCGTGAGCCGCGCGTTAGAGGCGCGTCTTCGCGCGGCGGGATA
CCCGTTCGACTTTGCCGATGCTGCGGCTGCGGGCGCCGCCTTGGCCAAGGTCACGCAAGGCGGGTTAACGATTGGGGTGC
CCTTTCCGTTCTCCATGCATGTGGAGCTGCTGCAAGTCTGGCGCTCGTCCACGCCACTCGCATCGGTGCCCCTGGACATC
CGGACCGTGCCGCCGCCCATGATGGCTCAGGCCTTGGCCTCGGGTGAGATCGACGCGTTCTGTGTTGGGGAGCCTTGGGG
ATCGGTCAGCGTCGAGAACGGCGCTGGCGCTTTGTTGCTGCCCGGACGCGCGATCTGGAGTTTCGCGCCGGAAAAAGTGC
TCGCGACCCGTGCCGATTGGGCCGAGACCGAGCCGCATCTGTTGGGCCGCGTTATGCGCACGGTCTGGCGTGCGGGCAAA
TGGCTCGCTGACCCCAGCAGCCGAACGGCGGCGGCCGAGCTCCTGTCGCGCCCGCGTTGGCTCGACGTGCCTGCGGAGCT
GGTGGACCGTGCCCTCACCGGCGAGTTGGCAATTTCTCCCGACGGTGAGGTCCGTGACGTCCCCGGTTTTCTGGAGTTCC
ACCATGGCGCCGCCAACTTTCCGTGGCGCAGTCAGGGCAAATGGATCGCCACTCAATTGGCCACACGCACCGGAATGGAC
CCGAGTGCCGCGGCCCGCCAAGCCGCCGACGTCTTCCGCAGCGATTTGTATCGCGCAGCGCTGGACGGAACCGGTGCCGA
CATGCCCGGAGCGTCCGAAAAACTGGAAGGCTCTCTCATCCACCCTACCGCCGTCGCGTCTACGCGGGGGCAGATGATTT
TGGATACTGATGTGTTTTTTGATGGGCGTATTTTTGATCCAACTACGTGA

Upstream 100 bases:

>100_bases
AGCAAGCCGCCTACGCCATTCTGCGCAAAGCGGCGATGGATCAAGGGCTGCGCATAGCGGACGTGGCGCAATCGCTGGTG
ACAGCGGCGGGATTGCTGCG

Downstream 100 bases:

>100_bases
GTTTGCCCAAAATTCGGGCGACCCGCACAGCCTATGCGGCAGTGCAGCGTAAAATCACCCAAGATCGCTGTTTTCGCCTT
GAGCGACTCGGGGCACGGTG

Product: putative nitrate transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MKTTSVPVAYMPLIDAAPLIVGQEMGFAEAEGISLELIAAPSWSSVRDMLAFGRVDLAHLLSVVPVAMALRLGGVTNPMS
AVSVLSVNGNVIGVSRALEARLRAAGYPFDFADAAAAGAALAKVTQGGLTIGVPFPFSMHVELLQVWRSSTPLASVPLDI
RTVPPPMMAQALASGEIDAFCVGEPWGSVSVENGAGALLLPGRAIWSFAPEKVLATRADWAETEPHLLGRVMRTVWRAGK
WLADPSSRTAAAELLSRPRWLDVPAELVDRALTGELAISPDGEVRDVPGFLEFHHGAANFPWRSQGKWIATQLATRTGMD
PSAAARQAADVFRSDLYRAALDGTGADMPGASEKLEGSLIHPTAVASTRGQMILDTDVFFDGRIFDPTT

Sequences:

>Translated_389_residues
MKTTSVPVAYMPLIDAAPLIVGQEMGFAEAEGISLELIAAPSWSSVRDMLAFGRVDLAHLLSVVPVAMALRLGGVTNPMS
AVSVLSVNGNVIGVSRALEARLRAAGYPFDFADAAAAGAALAKVTQGGLTIGVPFPFSMHVELLQVWRSSTPLASVPLDI
RTVPPPMMAQALASGEIDAFCVGEPWGSVSVENGAGALLLPGRAIWSFAPEKVLATRADWAETEPHLLGRVMRTVWRAGK
WLADPSSRTAAAELLSRPRWLDVPAELVDRALTGELAISPDGEVRDVPGFLEFHHGAANFPWRSQGKWIATQLATRTGMD
PSAAARQAADVFRSDLYRAALDGTGADMPGASEKLEGSLIHPTAVASTRGQMILDTDVFFDGRIFDPTT
>Mature_389_residues
MKTTSVPVAYMPLIDAAPLIVGQEMGFAEAEGISLELIAAPSWSSVRDMLAFGRVDLAHLLSVVPVAMALRLGGVTNPMS
AVSVLSVNGNVIGVSRALEARLRAAGYPFDFADAAAAGAALAKVTQGGLTIGVPFPFSMHVELLQVWRSSTPLASVPLDI
RTVPPPMMAQALASGEIDAFCVGEPWGSVSVENGAGALLLPGRAIWSFAPEKVLATRADWAETEPHLLGRVMRTVWRAGK
WLADPSSRTAAAELLSRPRWLDVPAELVDRALTGELAISPDGEVRDVPGFLEFHHGAANFPWRSQGKWIATQLATRTGMD
PSAAARQAADVFRSDLYRAALDGTGADMPGASEKLEGSLIHPTAVASTRGQMILDTDVFFDGRIFDPTT

Specific function: Probably part of a high-affinity binding-protein- dependent transport system for nitrate. Probably responsible for energy coupling to the transport system [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR015168
- InterPro:   IPR005890 [H]

Pfam domain/function: PF00005 ABC_tran; PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 41203; Mature: 41203

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTTSVPVAYMPLIDAAPLIVGQEMGFAEAEGISLELIAAPSWSSVRDMLAFGRVDLAHL
CCCCCCCEEEECHHCCCCCEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCHHHH
LSVVPVAMALRLGGVTNPMSAVSVLSVNGNVIGVSRALEARLRAAGYPFDFADAAAAGAA
HHHHHHHHHHHHCCCCCCHHHEEEEEECCCEEEHHHHHHHHHHHCCCCCCHHHHHHHHHH
LAKVTQGGLTIGVPFPFSMHVELLQVWRSSTPLASVPLDIRTVPPPMMAQALASGEIDAF
HHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCCEECCEEEECCCCHHHHHHHHCCCCCEE
CVGEPWGSVSVENGAGALLLPGRAIWSFAPEKVLATRADWAETEPHLLGRVMRTVWRAGK
EECCCCCCEEECCCCCEEEECCHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC
WLADPSSRTAAAELLSRPRWLDVPAELVDRALTGELAISPDGEVRDVPGFLEFHHGAANF
CCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCHHHHCCCCCCC
PWRSQGKWIATQLATRTGMDPSAAARQAADVFRSDLYRAALDGTGADMPGASEKLEGSLI
CCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCEE
HPTAVASTRGQMILDTDVFFDGRIFDPTT
CCHHHHCCCCCEEEEECEEECCEECCCCC
>Mature Secondary Structure
MKTTSVPVAYMPLIDAAPLIVGQEMGFAEAEGISLELIAAPSWSSVRDMLAFGRVDLAHL
CCCCCCCEEEECHHCCCCCEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCHHHH
LSVVPVAMALRLGGVTNPMSAVSVLSVNGNVIGVSRALEARLRAAGYPFDFADAAAAGAA
HHHHHHHHHHHHCCCCCCHHHEEEEEECCCEEEHHHHHHHHHHHCCCCCCHHHHHHHHHH
LAKVTQGGLTIGVPFPFSMHVELLQVWRSSTPLASVPLDIRTVPPPMMAQALASGEIDAF
HHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCCEECCEEEECCCCHHHHHHHHCCCCCEE
CVGEPWGSVSVENGAGALLLPGRAIWSFAPEKVLATRADWAETEPHLLGRVMRTVWRAGK
EECCCCCCEEECCCCCEEEECCHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC
WLADPSSRTAAAELLSRPRWLDVPAELVDRALTGELAISPDGEVRDVPGFLEFHHGAANF
CCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCHHHHCCCCCCC
PWRSQGKWIATQLATRTGMDPSAAARQAADVFRSDLYRAALDGTGADMPGASEKLEGSLI
CCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCEE
HPTAVASTRGQMILDTDVFFDGRIFDPTT
CCHHHHCCCCCEEEEECEEECCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]