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The map label for this gene is nrtC [H]

Identifier: 89055531

GI number: 89055531

Start: 3066280

End: 3067638

Strand: Direct

Name: nrtC [H]

Synonym: Jann_3040

Alternate gene names: 89055531

Gene position: 3066280-3067638 (Clockwise)

Preceding gene: 89055530

Following gene: 89055532

Centisome position: 71.01

GC content: 61.81

Gene sequence:

>1359_bases
ATGAACCGGATTATCGCAGCCCTCTTTACCACCACAGCGCTCGCAGGCCCGCTTGCAGCACAAGACCTCGAAATCGACGA
GCTGACCTTCGGCTTCATCAAACTCACCGATATGGCGCCGCTCGCGATTGCCTATGAGATGGGCTTTTTCGAGGACGAAG
GCCTCTTCGTTACGCTTGAGGCGCAAGCCAATTGGCGGGTCCTTTTGGACGGGGTGATCGACGGTACGCTGGACGGCGCG
CACATGCTCGCGGGTCAACCGATTGCGGCTACAATCGGCTACGGCACGCAGGCCAATATCATCACCCCATTCTCCATGGA
CCTCAACGGCAACGGCATCACGGTCTCCAACGAGGTCTGGGATTTGATGCGCCCGCACATCCCCTCTATGGACGATGGCC
GCCCGGTTCATCCAATCAGCGCCTCGGCCCTCGCGCCCGTCGTCGAGCAATACCGCCAAGAGGGCACGCGCTTTGACATG
GGCATGGTCTTCCCCGTCTCCACCCATAATTACGAGATCCGCTTTTGGCTGGCCGCCGGTGGCCTGCACCCAGGTTTTTA
TAGCCCTGACGACATCACCGGCACGATTGACGCGGATGTTTTCCTGTCTGTCACGCCCCCTCCGCAGATGCCTGCGACGC
TGGAAGCGGGGACTATTTTTGGCTACGCGGTGGGGGAGCCCTGGAACCAGCAGGCCGTCCAACGGGGCATCGGTGTGCCG
GTGATCACCGATTATCAATTGTGGCCCAACAACCCCGAAAAGGTCTTTGGGATTACCGAAGACTTCGCCGAACAGAACCC
CAACACCACGCAGGCCATCGTCCGCGCGCTGATCCGGGCCGGCATGTGGCTGGACGAGAATGACAACGCCAACCGTGCGG
AAGCCGTGTCGATCCTGTCCTACCCGGAATACGTGGGCGCAGACGAAGACGTCATCGCGGCGTCCATGACTGGTACGTTC
GAATTCGAGCCCGGCGACGTGCGCGACATCCCCGATTTCAACGTCTTCTTCCGCTACTACGCGACCTATCCCTACTATTC
GGATGCGGTCTGGTACCTGACGCAAATGCGCCGCTGGGGCCAAATCCCCGAGGCCATGTCCGATGAGTGGTACCACGAGG
TTGCGGCGCAAGTGTACCGCCCCGACATCTATCTGGAGGCCGCGCGCAGCCTGGTCGATGACGGCTTGGCGGCGGAGGCC
GACTTCCCCTGGGACACCGACGGCTTCCGTGACGTTGAGACCGAGATGATGGGCGGCGTGCCCTACGACGGGCGCACGCC
CAACGCCTATATCGACGCGCTGGAGATCGGTCTGACCGGCGACGAAGTGGTCGTTGACGGGGCCGTCACGGGCGGCTGA

Upstream 100 bases:

>100_bases
GCCGCTCGAATGTGTCGCCCCTCCCGCGATGCTTTCGGCGGTTTTTTGTCTTTTTCACCGAGGCCTCACCCCTCGGACCC
CAGCCATAGGATTGATCCAG

Downstream 100 bases:

>100_bases
GGCTTGAGAAATGCTGCGGGTGCAAAATTTGTGCCCGCAGTAGCGCCCAAAAAATAGGCGGGAAAACTGGCATAATGAAC
CTGTAGTGAATCTGTAGTTT

Product: putative nitrate transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 452; Mature: 452

Protein sequence:

>452_residues
MNRIIAALFTTTALAGPLAAQDLEIDELTFGFIKLTDMAPLAIAYEMGFFEDEGLFVTLEAQANWRVLLDGVIDGTLDGA
HMLAGQPIAATIGYGTQANIITPFSMDLNGNGITVSNEVWDLMRPHIPSMDDGRPVHPISASALAPVVEQYRQEGTRFDM
GMVFPVSTHNYEIRFWLAAGGLHPGFYSPDDITGTIDADVFLSVTPPPQMPATLEAGTIFGYAVGEPWNQQAVQRGIGVP
VITDYQLWPNNPEKVFGITEDFAEQNPNTTQAIVRALIRAGMWLDENDNANRAEAVSILSYPEYVGADEDVIAASMTGTF
EFEPGDVRDIPDFNVFFRYYATYPYYSDAVWYLTQMRRWGQIPEAMSDEWYHEVAAQVYRPDIYLEAARSLVDDGLAAEA
DFPWDTDGFRDVETEMMGGVPYDGRTPNAYIDALEIGLTGDEVVVDGAVTGG

Sequences:

>Translated_452_residues
MNRIIAALFTTTALAGPLAAQDLEIDELTFGFIKLTDMAPLAIAYEMGFFEDEGLFVTLEAQANWRVLLDGVIDGTLDGA
HMLAGQPIAATIGYGTQANIITPFSMDLNGNGITVSNEVWDLMRPHIPSMDDGRPVHPISASALAPVVEQYRQEGTRFDM
GMVFPVSTHNYEIRFWLAAGGLHPGFYSPDDITGTIDADVFLSVTPPPQMPATLEAGTIFGYAVGEPWNQQAVQRGIGVP
VITDYQLWPNNPEKVFGITEDFAEQNPNTTQAIVRALIRAGMWLDENDNANRAEAVSILSYPEYVGADEDVIAASMTGTF
EFEPGDVRDIPDFNVFFRYYATYPYYSDAVWYLTQMRRWGQIPEAMSDEWYHEVAAQVYRPDIYLEAARSLVDDGLAAEA
DFPWDTDGFRDVETEMMGGVPYDGRTPNAYIDALEIGLTGDEVVVDGAVTGG
>Mature_452_residues
MNRIIAALFTTTALAGPLAAQDLEIDELTFGFIKLTDMAPLAIAYEMGFFEDEGLFVTLEAQANWRVLLDGVIDGTLDGA
HMLAGQPIAATIGYGTQANIITPFSMDLNGNGITVSNEVWDLMRPHIPSMDDGRPVHPISASALAPVVEQYRQEGTRFDM
GMVFPVSTHNYEIRFWLAAGGLHPGFYSPDDITGTIDADVFLSVTPPPQMPATLEAGTIFGYAVGEPWNQQAVQRGIGVP
VITDYQLWPNNPEKVFGITEDFAEQNPNTTQAIVRALIRAGMWLDENDNANRAEAVSILSYPEYVGADEDVIAASMTGTF
EFEPGDVRDIPDFNVFFRYYATYPYYSDAVWYLTQMRRWGQIPEAMSDEWYHEVAAQVYRPDIYLEAARSLVDDGLAAEA
DFPWDTDGFRDVETEMMGGVPYDGRTPNAYIDALEIGLTGDEVVVDGAVTGG

Specific function: Probably part of a high-affinity binding-protein- dependent transport system for nitrate. Probably responsible for energy coupling to the transport system [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR015168
- InterPro:   IPR005890 [H]

Pfam domain/function: PF00005 ABC_tran; PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 49744; Mature: 49744

Theoretical pI: Translated: 3.81; Mature: 3.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRIIAALFTTTALAGPLAAQDLEIDELTFGFIKLTDMAPLAIAYEMGFFEDEGLFVTLE
CCHHHHHHHHHHHHCCCCCCCCCCHHHEEEEEEEECCCCCEEEEEECCCEECCCEEEEEE
AQANWRVLLDGVIDGTLDGAHMLAGQPIAATIGYGTQANIITPFSMDLNGNGITVSNEVW
CCCCCEEEEEEECCCCCCCCHHHCCCCEEEEECCCCCCCEEEEEEEEECCCCEEECHHHH
DLMRPHIPSMDDGRPVHPISASALAPVVEQYRQEGTRFDMGMVFPVSTHNYEIRFWLAAG
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCEEEEEEECCCEEEEEEEEEC
GLHPGFYSPDDITGTIDADVFLSVTPPPQMPATLEAGTIFGYAVGEPWNQQAVQRGIGVP
CCCCCCCCCCCCCEEECCEEEEEECCCCCCCCEEECCCEEEEECCCCCCHHHHHHCCCCC
VITDYQLWPNNPEKVFGITEDFAEQNPNTTQAIVRALIRAGMWLDENDNANRAEAVSILS
EEEEEEECCCCCCEEEECCHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHEEEEEC
YPEYVGADEDVIAASMTGTFEFEPGDVRDIPDFNVFFRYYATYPYYSDAVWYLTQMRRWG
CHHHCCCCCCEEEEEECEEEEECCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHC
QIPEAMSDEWYHEVAAQVYRPDIYLEAARSLVDDGLAAEADFPWDTDGFRDVETEMMGGV
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCC
PYDGRTPNAYIDALEIGLTGDEVVVDGAVTGG
CCCCCCCCCEEEEEEECCCCCCEEEECCCCCC
>Mature Secondary Structure
MNRIIAALFTTTALAGPLAAQDLEIDELTFGFIKLTDMAPLAIAYEMGFFEDEGLFVTLE
CCHHHHHHHHHHHHCCCCCCCCCCHHHEEEEEEEECCCCCEEEEEECCCEECCCEEEEEE
AQANWRVLLDGVIDGTLDGAHMLAGQPIAATIGYGTQANIITPFSMDLNGNGITVSNEVW
CCCCCEEEEEEECCCCCCCCHHHCCCCEEEEECCCCCCCEEEEEEEEECCCCEEECHHHH
DLMRPHIPSMDDGRPVHPISASALAPVVEQYRQEGTRFDMGMVFPVSTHNYEIRFWLAAG
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCEEEEEEECCCEEEEEEEEEC
GLHPGFYSPDDITGTIDADVFLSVTPPPQMPATLEAGTIFGYAVGEPWNQQAVQRGIGVP
CCCCCCCCCCCCCEEECCEEEEEECCCCCCCCEEECCCEEEEECCCCCCHHHHHHCCCCC
VITDYQLWPNNPEKVFGITEDFAEQNPNTTQAIVRALIRAGMWLDENDNANRAEAVSILS
EEEEEEECCCCCCEEEECCHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHEEEEEC
YPEYVGADEDVIAASMTGTFEFEPGDVRDIPDFNVFFRYYATYPYYSDAVWYLTQMRRWG
CHHHCCCCCCEEEEEECEEEEECCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHC
QIPEAMSDEWYHEVAAQVYRPDIYLEAARSLVDDGLAAEADFPWDTDGFRDVETEMMGGV
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCC
PYDGRTPNAYIDALEIGLTGDEVVVDGAVTGG
CCCCCCCCCEEEEEEECCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]