| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055488
Identifier: 89055488
GI number: 89055488
Start: 3017041
End: 3017289
Strand: Direct
Name: 89055488
Synonym: Jann_2997
Alternate gene names: NA
Gene position: 3017041-3017289 (Clockwise)
Preceding gene: 89055486
Following gene: 89055489
Centisome position: 69.87
GC content: 67.07
Gene sequence:
>249_bases ATGCGGTCTGCCATGCTTCTTCTTTGCCTGTTACTTCTTGCCTGCGGCCCAAGCCGCCAGGAATTTGACGGCGCGCTGAG CGCTGAGGCCCGTACGGCAGACTATCCCAGTCTTGTGCCCCTCGGCCCGCTTCTGACCGCCGCAGAAGCACCGCTCGTGC GGACAGCCGCATCCGAGGGCACCAGCCTGGAAGCCCGTGCCGCGGATCTGCGCCGTCGCGCCGCCCGGTTGCAGGCCATG GCCCTTTAG
Upstream 100 bases:
>100_bases TGCGTGCCATGGACCGATGATTAACTGAACGTCTGTTCAATTCAAGCCGCTTCGCGGTCTCATCTGGACTTGCCCCCTAA AGGTCCGCTACCTCTATGGC
Downstream 100 bases:
>100_bases TACACTTACCGCCGCGCGTGCGTTGCAGCGATGGGGCGGGTCGGCTACACCCGGCGCGATCAGACACATGCGCCCGGAGG CCTCCATGACCGACACACTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MRSAMLLLCLLLLACGPSRQEFDGALSAEARTADYPSLVPLGPLLTAAEAPLVRTAASEGTSLEARAADLRRRAARLQAM AL
Sequences:
>Translated_82_residues MRSAMLLLCLLLLACGPSRQEFDGALSAEARTADYPSLVPLGPLLTAAEAPLVRTAASEGTSLEARAADLRRRAARLQAM AL >Mature_82_residues MRSAMLLLCLLLLACGPSRQEFDGALSAEARTADYPSLVPLGPLLTAAEAPLVRTAASEGTSLEARAADLRRRAARLQAM AL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8623; Mature: 8623
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSAMLLLCLLLLACGPSRQEFDGALSAEARTADYPSLVPLGPLLTAAEAPLVRTAASEG CCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHCCCC TSLEARAADLRRRAARLQAMAL CCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRSAMLLLCLLLLACGPSRQEFDGALSAEARTADYPSLVPLGPLLTAAEAPLVRTAASEG CCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHCCCC TSLEARAADLRRRAARLQAMAL CCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA