| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055388
Identifier: 89055388
GI number: 89055388
Start: 2915134
End: 2915379
Strand: Direct
Name: 89055388
Synonym: Jann_2897
Alternate gene names: NA
Gene position: 2915134-2915379 (Clockwise)
Preceding gene: 89055385
Following gene: 89055392
Centisome position: 67.51
GC content: 58.54
Gene sequence:
>246_bases ATGCCTGCGAGCATGGGCTTTCTTGCTTCCAGATCGCGCGACCTTTGCGGGGTGGCCGCTTTCCAAATGGAGGAGTGCCA TCACATCGGTGGCGTCGGACTGAAACCTGCCGAACAATCCGTCAGGTCACAGATCGGTCGCCGCCTTTTAGGAGCGACGC AGAACGCGGGTTTCGGTGTTTCTACCACGATGAACTCCGCCACGGACAAACTGCCCAGACAGGTCATAGAGGCACGAACC CGGTAA
Upstream 100 bases:
>100_bases GCTCAACCATAAGTAGAACATAACGTGAACACACTGGGCCCGTCTATCGGAAAGCACCCCCTGCCGGTCGCTCTGGGGGT GACCTTCGGGGTGCGGAGAA
Downstream 100 bases:
>100_bases TCCCGGTTAGACCCGGTAATCACTTTTCCTCTAACTCTCAGATACTTAACCGACTTTACCGGGTTTACCGGGTTTAGAGT TAAGAGGTAGAACCGCCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 81; Mature: 80
Protein sequence:
>81_residues MPASMGFLASRSRDLCGVAAFQMEECHHIGGVGLKPAEQSVRSQIGRRLLGATQNAGFGVSTTMNSATDKLPRQVIEART R
Sequences:
>Translated_81_residues MPASMGFLASRSRDLCGVAAFQMEECHHIGGVGLKPAEQSVRSQIGRRLLGATQNAGFGVSTTMNSATDKLPRQVIEART R >Mature_80_residues PASMGFLASRSRDLCGVAAFQMEECHHIGGVGLKPAEQSVRSQIGRRLLGATQNAGFGVSTTMNSATDKLPRQVIEARTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8660; Mature: 8529
Theoretical pI: Translated: 10.71; Mature: 10.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPASMGFLASRSRDLCGVAAFQMEECHHIGGVGLKPAEQSVRSQIGRRLLGATQNAGFGV CCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC STTMNSATDKLPRQVIEARTR CCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PASMGFLASRSRDLCGVAAFQMEECHHIGGVGLKPAEQSVRSQIGRRLLGATQNAGFGV CCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC STTMNSATDKLPRQVIEARTR CCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA