| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055385
Identifier: 89055385
GI number: 89055385
Start: 2913340
End: 2913873
Strand: Direct
Name: 89055385
Synonym: Jann_2894
Alternate gene names: NA
Gene position: 2913340-2913873 (Clockwise)
Preceding gene: 89055384
Following gene: 89055388
Centisome position: 67.47
GC content: 57.87
Gene sequence:
>534_bases TTGGAGCTATTGAAGCGAACGGACTGGTGGAGGTTGACGCAACTCGTTGTGGCAATCGGCGTGTCCAGCTTCATCGGCTA CCGTTTCCAGCCTATGGTCGCCAACAATCCCAACGCCGTGAACACGGTGGTGACGATCTTCTCCATACTCGCCGGGTTCT TGATCGCCGTGATTACGTTCATCGCAGAGCCGACGCTGCAACAGGCCCGGACTTGGGATGAATTGCAGCGGATGAAGGAG ACGGTCCGGCGCAAGTTGATCCGTCAGAAGCTGCTGTTCTTCCTCTACCTCCTCACGCTTGGGATTGCTCTCGCGATGTT CCTGACGCCACCGACCATGCTGGAACCGCTCAAGTGGCTGCAAACGGCATTCTTGGGGCTCGCTACATTCGTCTTTCTGG CGTCATTCTCGCTGCCCGGTTCGCTGATGAAGATTCAGATGGAGCGCTATGAGGCGGCCCTAGAGGACTCACGGCCCAAG GTCGTCACCGACGCCAAGAAGGCGGCGGAGCAGGCAAAGAAGCGTAAACCCTAG
Upstream 100 bases:
>100_bases CTCGAAACGGCGGCAAACTCAGTAAGTGTTTTTCAAGCATGGGATGCGATGGAGACTTATATGGGTGAACTGAATGAAAA TGGACAGATAGAGGCGTAAA
Downstream 100 bases:
>100_bases TCACCGCGCCGCGTCTCCGGGTCAACGACAACCTCCGGCTCGCCCGGGATGCGCTTCACGGCGTCGGGCCGGATGGGGCT GTCATACGTTCCCGCCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MELLKRTDWWRLTQLVVAIGVSSFIGYRFQPMVANNPNAVNTVVTIFSILAGFLIAVITFIAEPTLQQARTWDELQRMKE TVRRKLIRQKLLFFLYLLTLGIALAMFLTPPTMLEPLKWLQTAFLGLATFVFLASFSLPGSLMKIQMERYEAALEDSRPK VVTDAKKAAEQAKKRKP
Sequences:
>Translated_177_residues MELLKRTDWWRLTQLVVAIGVSSFIGYRFQPMVANNPNAVNTVVTIFSILAGFLIAVITFIAEPTLQQARTWDELQRMKE TVRRKLIRQKLLFFLYLLTLGIALAMFLTPPTMLEPLKWLQTAFLGLATFVFLASFSLPGSLMKIQMERYEAALEDSRPK VVTDAKKAAEQAKKRKP >Mature_177_residues MELLKRTDWWRLTQLVVAIGVSSFIGYRFQPMVANNPNAVNTVVTIFSILAGFLIAVITFIAEPTLQQARTWDELQRMKE TVRRKLIRQKLLFFLYLLTLGIALAMFLTPPTMLEPLKWLQTAFLGLATFVFLASFSLPGSLMKIQMERYEAALEDSRPK VVTDAKKAAEQAKKRKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20209; Mature: 20209
Theoretical pI: Translated: 10.83; Mature: 10.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELLKRTDWWRLTQLVVAIGVSSFIGYRFQPMVANNPNAVNTVVTIFSILAGFLIAVITF CCCHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH IAEPTLQQARTWDELQRMKETVRRKLIRQKLLFFLYLLTLGIALAMFLTPPTMLEPLKWL HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH QTAFLGLATFVFLASFSLPGSLMKIQMERYEAALEDSRPKVVTDAKKAAEQAKKRKP HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MELLKRTDWWRLTQLVVAIGVSSFIGYRFQPMVANNPNAVNTVVTIFSILAGFLIAVITF CCCHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH IAEPTLQQARTWDELQRMKETVRRKLIRQKLLFFLYLLTLGIALAMFLTPPTMLEPLKWL HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH QTAFLGLATFVFLASFSLPGSLMKIQMERYEAALEDSRPKVVTDAKKAAEQAKKRKP HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA