Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055385

Identifier: 89055385

GI number: 89055385

Start: 2913340

End: 2913873

Strand: Direct

Name: 89055385

Synonym: Jann_2894

Alternate gene names: NA

Gene position: 2913340-2913873 (Clockwise)

Preceding gene: 89055384

Following gene: 89055388

Centisome position: 67.47

GC content: 57.87

Gene sequence:

>534_bases
TTGGAGCTATTGAAGCGAACGGACTGGTGGAGGTTGACGCAACTCGTTGTGGCAATCGGCGTGTCCAGCTTCATCGGCTA
CCGTTTCCAGCCTATGGTCGCCAACAATCCCAACGCCGTGAACACGGTGGTGACGATCTTCTCCATACTCGCCGGGTTCT
TGATCGCCGTGATTACGTTCATCGCAGAGCCGACGCTGCAACAGGCCCGGACTTGGGATGAATTGCAGCGGATGAAGGAG
ACGGTCCGGCGCAAGTTGATCCGTCAGAAGCTGCTGTTCTTCCTCTACCTCCTCACGCTTGGGATTGCTCTCGCGATGTT
CCTGACGCCACCGACCATGCTGGAACCGCTCAAGTGGCTGCAAACGGCATTCTTGGGGCTCGCTACATTCGTCTTTCTGG
CGTCATTCTCGCTGCCCGGTTCGCTGATGAAGATTCAGATGGAGCGCTATGAGGCGGCCCTAGAGGACTCACGGCCCAAG
GTCGTCACCGACGCCAAGAAGGCGGCGGAGCAGGCAAAGAAGCGTAAACCCTAG

Upstream 100 bases:

>100_bases
CTCGAAACGGCGGCAAACTCAGTAAGTGTTTTTCAAGCATGGGATGCGATGGAGACTTATATGGGTGAACTGAATGAAAA
TGGACAGATAGAGGCGTAAA

Downstream 100 bases:

>100_bases
TCACCGCGCCGCGTCTCCGGGTCAACGACAACCTCCGGCTCGCCCGGGATGCGCTTCACGGCGTCGGGCCGGATGGGGCT
GTCATACGTTCCCGCCTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MELLKRTDWWRLTQLVVAIGVSSFIGYRFQPMVANNPNAVNTVVTIFSILAGFLIAVITFIAEPTLQQARTWDELQRMKE
TVRRKLIRQKLLFFLYLLTLGIALAMFLTPPTMLEPLKWLQTAFLGLATFVFLASFSLPGSLMKIQMERYEAALEDSRPK
VVTDAKKAAEQAKKRKP

Sequences:

>Translated_177_residues
MELLKRTDWWRLTQLVVAIGVSSFIGYRFQPMVANNPNAVNTVVTIFSILAGFLIAVITFIAEPTLQQARTWDELQRMKE
TVRRKLIRQKLLFFLYLLTLGIALAMFLTPPTMLEPLKWLQTAFLGLATFVFLASFSLPGSLMKIQMERYEAALEDSRPK
VVTDAKKAAEQAKKRKP
>Mature_177_residues
MELLKRTDWWRLTQLVVAIGVSSFIGYRFQPMVANNPNAVNTVVTIFSILAGFLIAVITFIAEPTLQQARTWDELQRMKE
TVRRKLIRQKLLFFLYLLTLGIALAMFLTPPTMLEPLKWLQTAFLGLATFVFLASFSLPGSLMKIQMERYEAALEDSRPK
VVTDAKKAAEQAKKRKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20209; Mature: 20209

Theoretical pI: Translated: 10.83; Mature: 10.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELLKRTDWWRLTQLVVAIGVSSFIGYRFQPMVANNPNAVNTVVTIFSILAGFLIAVITF
CCCHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IAEPTLQQARTWDELQRMKETVRRKLIRQKLLFFLYLLTLGIALAMFLTPPTMLEPLKWL
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
QTAFLGLATFVFLASFSLPGSLMKIQMERYEAALEDSRPKVVTDAKKAAEQAKKRKP
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MELLKRTDWWRLTQLVVAIGVSSFIGYRFQPMVANNPNAVNTVVTIFSILAGFLIAVITF
CCCHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IAEPTLQQARTWDELQRMKETVRRKLIRQKLLFFLYLLTLGIALAMFLTPPTMLEPLKWL
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
QTAFLGLATFVFLASFSLPGSLMKIQMERYEAALEDSRPKVVTDAKKAAEQAKKRKP
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA