| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is hisH
Identifier: 89055280
GI number: 89055280
Start: 2807236
End: 2807874
Strand: Direct
Name: hisH
Synonym: Jann_2789
Alternate gene names: 89055280
Gene position: 2807236-2807874 (Clockwise)
Preceding gene: 89055279
Following gene: 89055281
Centisome position: 65.01
GC content: 62.75
Gene sequence:
>639_bases ATGACGACCGTTCTGATCGACTATGACGCGGGCAATCTGCACTCCGCCGAGAAGGCGTTTCAACGCATGGCCCTTGAGGC GGATGCGGGCGCGCTGATCGTCTCTGCCGATCCCGATGTGGTCGCCAGCGCCGACCGTATCGTCCTGCCCGGTGACGGCG CCTTTCCCGCCTGCCGCCGTGGCCTTCAAACCATCGACGGGTTGGAGGAGGCGCTGTTGCACGCGGTGGAAACCAAAGGA AAACCGTTTCTGGGCATTTGCGTTGGCATGCAAATGATGACCAGCTGGGGCCGCGAATATGAAGATGTGGCCGGTTTCGG CTGGATCCCGGGCGAGGTCACGCAGATCGCGCCCTGCGACCCCGCCCTGAAGGTGCCGCATATGGGCTGGAACGATCTGG TCATCGACCACCCCCACGCGATCCTTGACGGCGTCACCACCGGCGATCACGCCTATTTCGTCCATTCCTATGCCATGCAA CCCGCAGATCCCGCCGATCTTCTGGCGCATGTGGAGTATGGCGGGCAGGTCACGGCCATCGTCGGGCGCGACACGATGGT GGGGATGCAGTTCCACCCGGAAAAGAGCCAATCAGCCGGTTTGCGCATGATTGCGAATTTCCTCGCCTGGCGGCCGTAG
Upstream 100 bases:
>100_bases GTTGGAGGTTGACCCACGCACGGCCGACGCCATCCCATCGACCAAGGGCAGCCTGTAAACGCGCCCTCCAGAGCACATCT TTGTTTAAGGAACGCACGCG
Downstream 100 bases:
>100_bases TCGCCGTGCACGCGCAGGGGCGTGCGCCCGCGGTTGAGGCGGACTGCGTCCAATCGTCCGCAAATCCATGTTTGGCCTGT CCGGCCCACCGCCAACGCGT
Product: imidazole glycerol phosphate synthase subunit HisH
Products: NA
Alternate protein names: IGP synthase glutamine amidotransferase subunit; IGP synthase subunit hisH; ImGP synthase subunit hisH; IGPS subunit hisH [H]
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MTTVLIDYDAGNLHSAEKAFQRMALEADAGALIVSADPDVVASADRIVLPGDGAFPACRRGLQTIDGLEEALLHAVETKG KPFLGICVGMQMMTSWGREYEDVAGFGWIPGEVTQIAPCDPALKVPHMGWNDLVIDHPHAILDGVTTGDHAYFVHSYAMQ PADPADLLAHVEYGGQVTAIVGRDTMVGMQFHPEKSQSAGLRMIANFLAWRP
Sequences:
>Translated_212_residues MTTVLIDYDAGNLHSAEKAFQRMALEADAGALIVSADPDVVASADRIVLPGDGAFPACRRGLQTIDGLEEALLHAVETKG KPFLGICVGMQMMTSWGREYEDVAGFGWIPGEVTQIAPCDPALKVPHMGWNDLVIDHPHAILDGVTTGDHAYFVHSYAMQ PADPADLLAHVEYGGQVTAIVGRDTMVGMQFHPEKSQSAGLRMIANFLAWRP >Mature_211_residues TTVLIDYDAGNLHSAEKAFQRMALEADAGALIVSADPDVVASADRIVLPGDGAFPACRRGLQTIDGLEEALLHAVETKGK PFLGICVGMQMMTSWGREYEDVAGFGWIPGEVTQIAPCDPALKVPHMGWNDLVIDHPHAILDGVTTGDHAYFVHSYAMQP ADPADLLAHVEYGGQVTAIVGRDTMVGMQFHPEKSQSAGLRMIANFLAWRP
Specific function: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The hisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to hisF for the synthesis of IGP and AICAR [H]
COG id: COG0118
COG function: function code E; Glutamine amidotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788334, Length=208, Percent_Identity=37.0192307692308, Blast_Score=126, Evalue=1e-30, Organism=Saccharomyces cerevisiae, GI6319725, Length=216, Percent_Identity=29.6296296296296, Blast_Score=93, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR010139 - InterPro: IPR016226 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: 2.4.2.-
Molecular weight: Translated: 22824; Mature: 22693
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTVLIDYDAGNLHSAEKAFQRMALEADAGALIVSADPDVVASADRIVLPGDGAFPACRR CEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCEECCCEEEECCCCCCHHHHH GLQTIDGLEEALLHAVETKGKPFLGICVGMQMMTSWGREYEDVAGFGWIPGEVTQIAPCD HHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCEECCCC PALKVPHMGWNDLVIDHPHAILDGVTTGDHAYFVHSYAMQPADPADLLAHVEYGGQVTAI CCCCCCCCCCCCEEEECCHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCEEEEE VGRDTMVGMQFHPEKSQSAGLRMIANFLAWRP ECCCEEEEEEECCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure TTVLIDYDAGNLHSAEKAFQRMALEADAGALIVSADPDVVASADRIVLPGDGAFPACRR EEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCEECCCEEEECCCCCCHHHHH GLQTIDGLEEALLHAVETKGKPFLGICVGMQMMTSWGREYEDVAGFGWIPGEVTQIAPCD HHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCEECCCC PALKVPHMGWNDLVIDHPHAILDGVTTGDHAYFVHSYAMQPADPADLLAHVEYGGQVTAI CCCCCCCCCCCCEEEECCHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCEEEEE VGRDTMVGMQFHPEKSQSAGLRMIANFLAWRP ECCCEEEEEEECCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Glycosyltransferases; Pentosyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA