| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055167
Identifier: 89055167
GI number: 89055167
Start: 2686359
End: 2687786
Strand: Direct
Name: 89055167
Synonym: Jann_2676
Alternate gene names: NA
Gene position: 2686359-2687786 (Clockwise)
Preceding gene: 89055166
Following gene: 89055168
Centisome position: 62.21
GC content: 61.62
Gene sequence:
>1428_bases ATGACTGACCAGACACGATTTTTCGATGAGATGACCGGCGGCGCACCGCAGGCGCGGGGGCCCTATCAACCCTATGATGC GTGGTTCCAGGGCGAGGATCTGGACGAGATCCGCAAGAAATCGGCGGAGGCCGAGGGCTTTTTTCGCCGCACCGGCATCA CCTTCAACGTCTATGGCCAGACCGAGGCCGATGAGCGGTTGATCCCCTTCGACGTGGTCCCGCGCATCATTTCAGGACGC GAATGGACGCGCCTGACCCGCGGGATCGAGCAACGTGTCCGGGCGCTCAACGCATTTCTCTACGATATCTATCACCGCCA GGAGATTCTGCGCGCAGGCCGCGTTCCGCGCGAGCTGATCGACGGCAATGAAGCGTTCCTGCCTCAGATGATGGGCGTGG CCCCTCCGGGCGGCATCTACACCCATATCGTCGGCACCGATCTGGTGCGCACCGGTGAGGATGAGTTTTTCGTGCTGGAA GATAACGCCCGCACGCCGTCGGGCGTCAGCTACATGCTGGAGAACCGCGAGACGATGTTGCAGATGTTTCCGGACCTGTT CAGCCGCATCAAGGTGCGCCCGGTTCAGAACTATCCGGCCAACCTGCGCCGATCGCTGGCTGCCTGTGCGCCCAATGCCT GCACGGGCGAATGTACCGTCGCGGTCCTGACCCCCGGCATCCACAATTCTGCGTATTTTGAACATGCCTTCCTGGCCGAT CAGATGGGCGTGGAGCTGGTCGAAGGCCACGACTTGCGCGTGAAAGACGGGCGTATCGCGATGCGCACGACCGAAGGCTA CAAAGCCATCGACGTGCTCTATCGCCGTGTGGATGATGATTTCCTCGACCCGCTGAACTTCAACCCCGACAGCATGTTGG GCGTGCCCGGCATCATGGATGTCTACCGCGCGGGCGGGATCACGATTGCCAATGCGCCGGGCACCGGCATCTCGGACGAC AAGGCGCTCTATAGCTACATGCCGGATATCATTGAGTTCTATACGGGCGAAAAGGCGCTTTTGCAGAATGTGCCAACCCA TAGATGCTCCGAGCCCGAGGCGCTGAAATACGTACTCGACAATCTAGCGGAGCTGGTGGTGAAGGAAGTCCACGGCTCAG GCGGCTATGGCATGCTGGTGGGGCCTGCCGCATCGAAGACAGAGATCGAGGCGTTCCGCAAAAAGCTGGAAGCCAACCCG TCCAATTATATCGCGCAGCCCACGCTCGCGCTGTCGACCTGCCCGATCCTCACCGAGGCAGGACTGGCGCCGCGTCACGT CGATCTGCGGCCATTCGTGCTGATGGCGCCCAACAAGACCACCATTACCCCCGGCGGGCTGACCCGCGTGGCCTTGGCGG AGGGCAGCCTGGTGGTGAACTCAAGCCAGGGCGGCGGCACCAAAGACACCTGGGTACTGGAGGACTAG
Upstream 100 bases:
>100_bases ATTTTAGGCAAACCTCCTTCAAGACCATGAAAATATGGTAAGAATGACTGGCCCTTTCACTCAGAGACTCATCTGTTAGG GTCATGCGCTTGGAGGACCT
Downstream 100 bases:
>100_bases ACATGCTTGGTAAAACCGCAGGCGGTCTCTACTGGCTCTTCCGCTATCTGGAACGGTCGGAAAATACCGCACGACTGATT GAAACCGGCTTTCGGATCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 475; Mature: 474
Protein sequence:
>475_residues MTDQTRFFDEMTGGAPQARGPYQPYDAWFQGEDLDEIRKKSAEAEGFFRRTGITFNVYGQTEADERLIPFDVVPRIISGR EWTRLTRGIEQRVRALNAFLYDIYHRQEILRAGRVPRELIDGNEAFLPQMMGVAPPGGIYTHIVGTDLVRTGEDEFFVLE DNARTPSGVSYMLENRETMLQMFPDLFSRIKVRPVQNYPANLRRSLAACAPNACTGECTVAVLTPGIHNSAYFEHAFLAD QMGVELVEGHDLRVKDGRIAMRTTEGYKAIDVLYRRVDDDFLDPLNFNPDSMLGVPGIMDVYRAGGITIANAPGTGISDD KALYSYMPDIIEFYTGEKALLQNVPTHRCSEPEALKYVLDNLAELVVKEVHGSGGYGMLVGPAASKTEIEAFRKKLEANP SNYIAQPTLALSTCPILTEAGLAPRHVDLRPFVLMAPNKTTITPGGLTRVALAEGSLVVNSSQGGGTKDTWVLED
Sequences:
>Translated_475_residues MTDQTRFFDEMTGGAPQARGPYQPYDAWFQGEDLDEIRKKSAEAEGFFRRTGITFNVYGQTEADERLIPFDVVPRIISGR EWTRLTRGIEQRVRALNAFLYDIYHRQEILRAGRVPRELIDGNEAFLPQMMGVAPPGGIYTHIVGTDLVRTGEDEFFVLE DNARTPSGVSYMLENRETMLQMFPDLFSRIKVRPVQNYPANLRRSLAACAPNACTGECTVAVLTPGIHNSAYFEHAFLAD QMGVELVEGHDLRVKDGRIAMRTTEGYKAIDVLYRRVDDDFLDPLNFNPDSMLGVPGIMDVYRAGGITIANAPGTGISDD KALYSYMPDIIEFYTGEKALLQNVPTHRCSEPEALKYVLDNLAELVVKEVHGSGGYGMLVGPAASKTEIEAFRKKLEANP SNYIAQPTLALSTCPILTEAGLAPRHVDLRPFVLMAPNKTTITPGGLTRVALAEGSLVVNSSQGGGTKDTWVLED >Mature_474_residues TDQTRFFDEMTGGAPQARGPYQPYDAWFQGEDLDEIRKKSAEAEGFFRRTGITFNVYGQTEADERLIPFDVVPRIISGRE WTRLTRGIEQRVRALNAFLYDIYHRQEILRAGRVPRELIDGNEAFLPQMMGVAPPGGIYTHIVGTDLVRTGEDEFFVLED NARTPSGVSYMLENRETMLQMFPDLFSRIKVRPVQNYPANLRRSLAACAPNACTGECTVAVLTPGIHNSAYFEHAFLADQ MGVELVEGHDLRVKDGRIAMRTTEGYKAIDVLYRRVDDDFLDPLNFNPDSMLGVPGIMDVYRAGGITIANAPGTGISDDK ALYSYMPDIIEFYTGEKALLQNVPTHRCSEPEALKYVLDNLAELVVKEVHGSGGYGMLVGPAASKTEIEAFRKKLEANPS NYIAQPTLALSTCPILTEAGLAPRHVDLRPFVLMAPNKTTITPGGLTRVALAEGSLVVNSSQGGGTKDTWVLED
Specific function: Unknown
COG id: COG2308
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis RV2411c [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007297 - InterPro: IPR007302 - InterPro: IPR016450 [H]
Pfam domain/function: PF04169 DUF404; PF04174 DUF407 [H]
EC number: NA
Molecular weight: Translated: 52582; Mature: 52451
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDQTRFFDEMTGGAPQARGPYQPYDAWFQGEDLDEIRKKSAEAEGFFRRTGITFNVYGQ CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHCCCEECCCCEEEEECC TEADERLIPFDVVPRIISGREWTRLTRGIEQRVRALNAFLYDIYHRQEILRAGRVPRELI CCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH DGNEAFLPQMMGVAPPGGIYTHIVGTDLVRTGEDEFFVLEDNARTPSGVSYMLENRETML CCCHHHHHHHHCCCCCCCEEEEECCCHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHH QMFPDLFSRIKVRPVQNYPANLRRSLAACAPNACTGECTVAVLTPGIHNSAYFEHAFLAD HHHHHHHHHEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHH QMGVELVEGHDLRVKDGRIAMRTTEGYKAIDVLYRRVDDDFLDPLNFNPDSMLGVPGIMD HHCCEEECCCCEEEECCEEEEEECCCHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCHHHH VYRAGGITIANAPGTGISDDKALYSYMPDIIEFYTGEKALLQNVPTHRCSEPEALKYVLD HHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHH NLAELVVKEVHGSGGYGMLVGPAASKTEIEAFRKKLEANPSNYIAQPTLALSTCPILTEA HHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCHHHHC GLAPRHVDLRPFVLMAPNKTTITPGGLTRVALAEGSLVVNSSQGGGTKDTWVLED CCCCCCCCCCEEEEECCCCCEECCCCCEEEEEECCCEEEECCCCCCCCCCEEECC >Mature Secondary Structure TDQTRFFDEMTGGAPQARGPYQPYDAWFQGEDLDEIRKKSAEAEGFFRRTGITFNVYGQ CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHCCCEECCCCEEEEECC TEADERLIPFDVVPRIISGREWTRLTRGIEQRVRALNAFLYDIYHRQEILRAGRVPRELI CCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH DGNEAFLPQMMGVAPPGGIYTHIVGTDLVRTGEDEFFVLEDNARTPSGVSYMLENRETML CCCHHHHHHHHCCCCCCCEEEEECCCHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHH QMFPDLFSRIKVRPVQNYPANLRRSLAACAPNACTGECTVAVLTPGIHNSAYFEHAFLAD HHHHHHHHHEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHH QMGVELVEGHDLRVKDGRIAMRTTEGYKAIDVLYRRVDDDFLDPLNFNPDSMLGVPGIMD HHCCEEECCCCEEEECCEEEEEECCCHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCHHHH VYRAGGITIANAPGTGISDDKALYSYMPDIIEFYTGEKALLQNVPTHRCSEPEALKYVLD HHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHH NLAELVVKEVHGSGGYGMLVGPAASKTEIEAFRKKLEANPSNYIAQPTLALSTCPILTEA HHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCHHHHC GLAPRHVDLRPFVLMAPNKTTITPGGLTRVALAEGSLVVNSSQGGGTKDTWVLED CCCCCCCCCCEEEEECCCCCEECCCCCEEEEEECCCEEEECCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1368738; 8590279; 8905231 [H]