Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055167

Identifier: 89055167

GI number: 89055167

Start: 2686359

End: 2687786

Strand: Direct

Name: 89055167

Synonym: Jann_2676

Alternate gene names: NA

Gene position: 2686359-2687786 (Clockwise)

Preceding gene: 89055166

Following gene: 89055168

Centisome position: 62.21

GC content: 61.62

Gene sequence:

>1428_bases
ATGACTGACCAGACACGATTTTTCGATGAGATGACCGGCGGCGCACCGCAGGCGCGGGGGCCCTATCAACCCTATGATGC
GTGGTTCCAGGGCGAGGATCTGGACGAGATCCGCAAGAAATCGGCGGAGGCCGAGGGCTTTTTTCGCCGCACCGGCATCA
CCTTCAACGTCTATGGCCAGACCGAGGCCGATGAGCGGTTGATCCCCTTCGACGTGGTCCCGCGCATCATTTCAGGACGC
GAATGGACGCGCCTGACCCGCGGGATCGAGCAACGTGTCCGGGCGCTCAACGCATTTCTCTACGATATCTATCACCGCCA
GGAGATTCTGCGCGCAGGCCGCGTTCCGCGCGAGCTGATCGACGGCAATGAAGCGTTCCTGCCTCAGATGATGGGCGTGG
CCCCTCCGGGCGGCATCTACACCCATATCGTCGGCACCGATCTGGTGCGCACCGGTGAGGATGAGTTTTTCGTGCTGGAA
GATAACGCCCGCACGCCGTCGGGCGTCAGCTACATGCTGGAGAACCGCGAGACGATGTTGCAGATGTTTCCGGACCTGTT
CAGCCGCATCAAGGTGCGCCCGGTTCAGAACTATCCGGCCAACCTGCGCCGATCGCTGGCTGCCTGTGCGCCCAATGCCT
GCACGGGCGAATGTACCGTCGCGGTCCTGACCCCCGGCATCCACAATTCTGCGTATTTTGAACATGCCTTCCTGGCCGAT
CAGATGGGCGTGGAGCTGGTCGAAGGCCACGACTTGCGCGTGAAAGACGGGCGTATCGCGATGCGCACGACCGAAGGCTA
CAAAGCCATCGACGTGCTCTATCGCCGTGTGGATGATGATTTCCTCGACCCGCTGAACTTCAACCCCGACAGCATGTTGG
GCGTGCCCGGCATCATGGATGTCTACCGCGCGGGCGGGATCACGATTGCCAATGCGCCGGGCACCGGCATCTCGGACGAC
AAGGCGCTCTATAGCTACATGCCGGATATCATTGAGTTCTATACGGGCGAAAAGGCGCTTTTGCAGAATGTGCCAACCCA
TAGATGCTCCGAGCCCGAGGCGCTGAAATACGTACTCGACAATCTAGCGGAGCTGGTGGTGAAGGAAGTCCACGGCTCAG
GCGGCTATGGCATGCTGGTGGGGCCTGCCGCATCGAAGACAGAGATCGAGGCGTTCCGCAAAAAGCTGGAAGCCAACCCG
TCCAATTATATCGCGCAGCCCACGCTCGCGCTGTCGACCTGCCCGATCCTCACCGAGGCAGGACTGGCGCCGCGTCACGT
CGATCTGCGGCCATTCGTGCTGATGGCGCCCAACAAGACCACCATTACCCCCGGCGGGCTGACCCGCGTGGCCTTGGCGG
AGGGCAGCCTGGTGGTGAACTCAAGCCAGGGCGGCGGCACCAAAGACACCTGGGTACTGGAGGACTAG

Upstream 100 bases:

>100_bases
ATTTTAGGCAAACCTCCTTCAAGACCATGAAAATATGGTAAGAATGACTGGCCCTTTCACTCAGAGACTCATCTGTTAGG
GTCATGCGCTTGGAGGACCT

Downstream 100 bases:

>100_bases
ACATGCTTGGTAAAACCGCAGGCGGTCTCTACTGGCTCTTCCGCTATCTGGAACGGTCGGAAAATACCGCACGACTGATT
GAAACCGGCTTTCGGATCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 475; Mature: 474

Protein sequence:

>475_residues
MTDQTRFFDEMTGGAPQARGPYQPYDAWFQGEDLDEIRKKSAEAEGFFRRTGITFNVYGQTEADERLIPFDVVPRIISGR
EWTRLTRGIEQRVRALNAFLYDIYHRQEILRAGRVPRELIDGNEAFLPQMMGVAPPGGIYTHIVGTDLVRTGEDEFFVLE
DNARTPSGVSYMLENRETMLQMFPDLFSRIKVRPVQNYPANLRRSLAACAPNACTGECTVAVLTPGIHNSAYFEHAFLAD
QMGVELVEGHDLRVKDGRIAMRTTEGYKAIDVLYRRVDDDFLDPLNFNPDSMLGVPGIMDVYRAGGITIANAPGTGISDD
KALYSYMPDIIEFYTGEKALLQNVPTHRCSEPEALKYVLDNLAELVVKEVHGSGGYGMLVGPAASKTEIEAFRKKLEANP
SNYIAQPTLALSTCPILTEAGLAPRHVDLRPFVLMAPNKTTITPGGLTRVALAEGSLVVNSSQGGGTKDTWVLED

Sequences:

>Translated_475_residues
MTDQTRFFDEMTGGAPQARGPYQPYDAWFQGEDLDEIRKKSAEAEGFFRRTGITFNVYGQTEADERLIPFDVVPRIISGR
EWTRLTRGIEQRVRALNAFLYDIYHRQEILRAGRVPRELIDGNEAFLPQMMGVAPPGGIYTHIVGTDLVRTGEDEFFVLE
DNARTPSGVSYMLENRETMLQMFPDLFSRIKVRPVQNYPANLRRSLAACAPNACTGECTVAVLTPGIHNSAYFEHAFLAD
QMGVELVEGHDLRVKDGRIAMRTTEGYKAIDVLYRRVDDDFLDPLNFNPDSMLGVPGIMDVYRAGGITIANAPGTGISDD
KALYSYMPDIIEFYTGEKALLQNVPTHRCSEPEALKYVLDNLAELVVKEVHGSGGYGMLVGPAASKTEIEAFRKKLEANP
SNYIAQPTLALSTCPILTEAGLAPRHVDLRPFVLMAPNKTTITPGGLTRVALAEGSLVVNSSQGGGTKDTWVLED
>Mature_474_residues
TDQTRFFDEMTGGAPQARGPYQPYDAWFQGEDLDEIRKKSAEAEGFFRRTGITFNVYGQTEADERLIPFDVVPRIISGRE
WTRLTRGIEQRVRALNAFLYDIYHRQEILRAGRVPRELIDGNEAFLPQMMGVAPPGGIYTHIVGTDLVRTGEDEFFVLED
NARTPSGVSYMLENRETMLQMFPDLFSRIKVRPVQNYPANLRRSLAACAPNACTGECTVAVLTPGIHNSAYFEHAFLADQ
MGVELVEGHDLRVKDGRIAMRTTEGYKAIDVLYRRVDDDFLDPLNFNPDSMLGVPGIMDVYRAGGITIANAPGTGISDDK
ALYSYMPDIIEFYTGEKALLQNVPTHRCSEPEALKYVLDNLAELVVKEVHGSGGYGMLVGPAASKTEIEAFRKKLEANPS
NYIAQPTLALSTCPILTEAGLAPRHVDLRPFVLMAPNKTTITPGGLTRVALAEGSLVVNSSQGGGTKDTWVLED

Specific function: Unknown

COG id: COG2308

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis RV2411c [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007297
- InterPro:   IPR007302
- InterPro:   IPR016450 [H]

Pfam domain/function: PF04169 DUF404; PF04174 DUF407 [H]

EC number: NA

Molecular weight: Translated: 52582; Mature: 52451

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDQTRFFDEMTGGAPQARGPYQPYDAWFQGEDLDEIRKKSAEAEGFFRRTGITFNVYGQ
CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHCCCEECCCCEEEEECC
TEADERLIPFDVVPRIISGREWTRLTRGIEQRVRALNAFLYDIYHRQEILRAGRVPRELI
CCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
DGNEAFLPQMMGVAPPGGIYTHIVGTDLVRTGEDEFFVLEDNARTPSGVSYMLENRETML
CCCHHHHHHHHCCCCCCCEEEEECCCHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHH
QMFPDLFSRIKVRPVQNYPANLRRSLAACAPNACTGECTVAVLTPGIHNSAYFEHAFLAD
HHHHHHHHHEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHH
QMGVELVEGHDLRVKDGRIAMRTTEGYKAIDVLYRRVDDDFLDPLNFNPDSMLGVPGIMD
HHCCEEECCCCEEEECCEEEEEECCCHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCHHHH
VYRAGGITIANAPGTGISDDKALYSYMPDIIEFYTGEKALLQNVPTHRCSEPEALKYVLD
HHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHH
NLAELVVKEVHGSGGYGMLVGPAASKTEIEAFRKKLEANPSNYIAQPTLALSTCPILTEA
HHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCHHHHC
GLAPRHVDLRPFVLMAPNKTTITPGGLTRVALAEGSLVVNSSQGGGTKDTWVLED
CCCCCCCCCCEEEEECCCCCEECCCCCEEEEEECCCEEEECCCCCCCCCCEEECC
>Mature Secondary Structure 
TDQTRFFDEMTGGAPQARGPYQPYDAWFQGEDLDEIRKKSAEAEGFFRRTGITFNVYGQ
CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHCCCEECCCCEEEEECC
TEADERLIPFDVVPRIISGREWTRLTRGIEQRVRALNAFLYDIYHRQEILRAGRVPRELI
CCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
DGNEAFLPQMMGVAPPGGIYTHIVGTDLVRTGEDEFFVLEDNARTPSGVSYMLENRETML
CCCHHHHHHHHCCCCCCCEEEEECCCHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHH
QMFPDLFSRIKVRPVQNYPANLRRSLAACAPNACTGECTVAVLTPGIHNSAYFEHAFLAD
HHHHHHHHHEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHH
QMGVELVEGHDLRVKDGRIAMRTTEGYKAIDVLYRRVDDDFLDPLNFNPDSMLGVPGIMD
HHCCEEECCCCEEEECCEEEEEECCCHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCHHHH
VYRAGGITIANAPGTGISDDKALYSYMPDIIEFYTGEKALLQNVPTHRCSEPEALKYVLD
HHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHH
NLAELVVKEVHGSGGYGMLVGPAASKTEIEAFRKKLEANPSNYIAQPTLALSTCPILTEA
HHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCHHHHC
GLAPRHVDLRPFVLMAPNKTTITPGGLTRVALAEGSLVVNSSQGGGTKDTWVLED
CCCCCCCCCCEEEEECCCCCEECCCCCEEEEEECCCEEEECCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1368738; 8590279; 8905231 [H]