| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055168
Identifier: 89055168
GI number: 89055168
Start: 2687789
End: 2688730
Strand: Direct
Name: 89055168
Synonym: Jann_2677
Alternate gene names: NA
Gene position: 2687789-2688730 (Clockwise)
Preceding gene: 89055167
Following gene: 89055169
Centisome position: 62.25
GC content: 59.66
Gene sequence:
>942_bases ATGCTTGGTAAAACCGCAGGCGGTCTCTACTGGCTCTTCCGCTATCTGGAACGGTCGGAAAATACCGCACGACTGATTGA AACCGGCTTTCGGATCGCGCTGACGCGGCCCGATGGGTCTGACGATGAATGGCGCTCTGTGCTGCAAACGGCGGCGGTGC GCGACCTTTACGAGGGACTTTATGGAGAGGTCGAGCAGGCCAAAGCCATTGATTTCCTGCTGCGGGACCGCGCGAACCCC TCATCGATCCTGTCCAGCATCTCAGAGGCCCGCCAAAATGCGCGCCTGACCCGCACGGCCCTGACACGCGAGGTGTGGGA GGCGATCAACGACGCCTATATGAACCTCAAGGAGCTGCTGGCGCATCCCGTGTCTGCAAAGACCCTGCCCGGAACCCTTG CCACGATCCGACAGCACTCGGCGCTGGTGCGTGGGGCGATGCACGGCACGATGCTGCGCACGGATATCTTTGATTTCTGC CGTCTGGGCACGTTCATCGAGCGCGCCGACAACACCGCGCGGATTCTGGACGTGAAATATTACGTGCTGCTGCCATCGAT GACGCAGGTGGGATCAGACCTGGACAATGTGCAATGGGAAACGATCCTGCGGGCCGTGGCCTCCCACCGGTCCTACCGCT GGCTGATGGGCGGTGAGACGACGCCGAAGGGCATCGCCGATTTCCTGGTTTTCGACACCCGCATGCCGCGCAGTCTGCGG TTCACGGTCAAGAAAATGGCGTCCAATCTGGAATATCTGGCGGAAAATTATGGTCAGCGTCACGCTTGCCATGACCAGAT GGACGTGCTTCTCGCGCGGCTCAAACATGGCACAATCGACGAGGTGTTTGACGATGGCCTGCATGAATTCCTGACCGAGT TCCTGTTGGATATCGGCGCGCTCGGAGCGCAAATCGAGAGTGATTACAGGTTCCTGGGGTAG
Upstream 100 bases:
>100_bases CCGGCGGGCTGACCCGCGTGGCCTTGGCGGAGGGCAGCCTGGTGGTGAACTCAAGCCAGGGCGGCGGCACCAAAGACACC TGGGTACTGGAGGACTAGAC
Downstream 100 bases:
>100_bases ACGCACATGCAGTTGACGATTTCGCATACAACAACCTACCGGTTCGAGCAGCCCGCCCATTACGGTCTGCAACAGCTGCG TCTGACGCCGCTGTCCCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MLGKTAGGLYWLFRYLERSENTARLIETGFRIALTRPDGSDDEWRSVLQTAAVRDLYEGLYGEVEQAKAIDFLLRDRANP SSILSSISEARQNARLTRTALTREVWEAINDAYMNLKELLAHPVSAKTLPGTLATIRQHSALVRGAMHGTMLRTDIFDFC RLGTFIERADNTARILDVKYYVLLPSMTQVGSDLDNVQWETILRAVASHRSYRWLMGGETTPKGIADFLVFDTRMPRSLR FTVKKMASNLEYLAENYGQRHACHDQMDVLLARLKHGTIDEVFDDGLHEFLTEFLLDIGALGAQIESDYRFLG
Sequences:
>Translated_313_residues MLGKTAGGLYWLFRYLERSENTARLIETGFRIALTRPDGSDDEWRSVLQTAAVRDLYEGLYGEVEQAKAIDFLLRDRANP SSILSSISEARQNARLTRTALTREVWEAINDAYMNLKELLAHPVSAKTLPGTLATIRQHSALVRGAMHGTMLRTDIFDFC RLGTFIERADNTARILDVKYYVLLPSMTQVGSDLDNVQWETILRAVASHRSYRWLMGGETTPKGIADFLVFDTRMPRSLR FTVKKMASNLEYLAENYGQRHACHDQMDVLLARLKHGTIDEVFDDGLHEFLTEFLLDIGALGAQIESDYRFLG >Mature_313_residues MLGKTAGGLYWLFRYLERSENTARLIETGFRIALTRPDGSDDEWRSVLQTAAVRDLYEGLYGEVEQAKAIDFLLRDRANP SSILSSISEARQNARLTRTALTREVWEAINDAYMNLKELLAHPVSAKTLPGTLATIRQHSALVRGAMHGTMLRTDIFDFC RLGTFIERADNTARILDVKYYVLLPSMTQVGSDLDNVQWETILRAVASHRSYRWLMGGETTPKGIADFLVFDTRMPRSLR FTVKKMASNLEYLAENYGQRHACHDQMDVLLARLKHGTIDEVFDDGLHEFLTEFLLDIGALGAQIESDYRFLG
Specific function: Unknown
COG id: COG2307
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35532; Mature: 35532
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGKTAGGLYWLFRYLERSENTARLIETGFRIALTRPDGSDDEWRSVLQTAAVRDLYEGL CCCCCHHHHHHHHHHHHHCCCHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH YGEVEQAKAIDFLLRDRANPSSILSSISEARQNARLTRTALTREVWEAINDAYMNLKELL HCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AHPVSAKTLPGTLATIRQHSALVRGAMHGTMLRTDIFDFCRLGTFIERADNTARILDVKY CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHH YVLLPSMTQVGSDLDNVQWETILRAVASHRSYRWLMGGETTPKGIADFLVFDTRMPRSLR HHEECCHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHH FTVKKMASNLEYLAENYGQRHACHDQMDVLLARLKHGTIDEVFDDGLHEFLTEFLLDIGA HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LGAQIESDYRFLG HHHHHHCCCCCCC >Mature Secondary Structure MLGKTAGGLYWLFRYLERSENTARLIETGFRIALTRPDGSDDEWRSVLQTAAVRDLYEGL CCCCCHHHHHHHHHHHHHCCCHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH YGEVEQAKAIDFLLRDRANPSSILSSISEARQNARLTRTALTREVWEAINDAYMNLKELL HCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AHPVSAKTLPGTLATIRQHSALVRGAMHGTMLRTDIFDFCRLGTFIERADNTARILDVKY CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHH YVLLPSMTQVGSDLDNVQWETILRAVASHRSYRWLMGGETTPKGIADFLVFDTRMPRSLR HHEECCHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHH FTVKKMASNLEYLAENYGQRHACHDQMDVLLARLKHGTIDEVFDDGLHEFLTEFLLDIGA HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LGAQIESDYRFLG HHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA