Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055152

Identifier: 89055152

GI number: 89055152

Start: 2670683

End: 2672071

Strand: Reverse

Name: 89055152

Synonym: Jann_2661

Alternate gene names: NA

Gene position: 2672071-2670683 (Counterclockwise)

Preceding gene: 89055153

Following gene: 89055146

Centisome position: 61.88

GC content: 62.92

Gene sequence:

>1389_bases
ATGCGATTGCCCACCTTTGCCCTGTCCGTTCTAGCGTGCCTCGCGGCGCCTTTGACCGCACAGGAAGCGTTTACCTGGGT
CTATGATGCTGAATTTGGGTTTTACCCCGAGAACTCGCGCCTGAATCTGATCGCCACGCAAGACCCAGCCCTGAATGTGC
GGTCCGAGACCGGTCTGCCCCGGGGCCTGATCTGGGCCACCTGTCTGGGGGAGATCGACGGCGGCGAGATTGCCATCCGG
TTTGAGAGTTTCGCGGGGGCTGCCCAAAACTGGGACACGGTGCCGTTCACCCTGTCGGGGTCGTCCGGCGCAACGTTCAA
CATGACCGGTGAGGTGCGCGACGCAGGCCCCGACCCGGTCGGCGGGGTGGAAATACTGGTCCTGGCGGGCGGCCTCGAAA
TGCAGATGCTGGCCACGTCAGATATCGTGACCTACGGGGTGACCGGATTGGACGATTTCATCACGGCGTTCGATCTGTCC
GCGAACCGCGCCTATGTTGGCGAATTCGATGCCCATTGCAGCGGCGTGGCCCCCGGCGGCGCGTTGCAACGACAGCCTTC
GTCCGGCTCCGCCTTGGCACCATTGTCCGGTCCCGTGCCTGATTTCGGACCAGCGATCTCAGGCCATGATTGGGCGCGGT
TTACCGATATCCGCGACGATGTGTTCCAAACCATCCTGAATGTGCGCTACGGGGTGCCGCAGACCGATGACGTGCTTATC
GTGGGGGAGTGCAACATTGGGGCCCAGGGGCCGTTGGTCGCGTTGCAAGTCAGTGCAGATGTCGAAGGACTGGTTGAGCA
CGCGCCCGCCACCCTGCGCATCCGGTCCAGCGATGGCAGGTCCGTGGATGTGGATGGCAGTGTCGTCGGCACGGAGGCAG
AGCTTGGCATTCTGGGGATCGAGGTGGTGTTGGCCCCCTCCGACCCCGCATGGCAGGTGATCGCCGGCGATGAGATTGTG
CAGTTTGAACGCGTGGGCGGTCGCGATGGCTTTGTACTGACAGGTGACGGGCCGGGCACTCTGGGGCCGTTTCTGACCGA
TTGCGACCAGATCGGGGACCTGACACCAGAAGGCGGCACCAGCCCCGGCGCACCGGCGGGTGAGCAAGGTGGATCCGTGT
CCTGTGACGCTCTGGGGCAGGTGGTGTCGGCTGATACCGGGCAGCCAATGGTTCTGACCTTTCGCAATCAAAGCGGGGTC
TTCCGTGGTCTGTCGTGGATCGGAGCCGATGGCGTGCCCCTTGATCAGGGTGGCCTGAATGCGGGCGAGGTGGTGAGCTT
CAACACCGATCCCGGCCACATCTGGATGGCGACCGATGGACCGGGGAATTGCCGTGAGATGATCCAGCCCGTATCTGGCC
AGATCGACTATATTCTAACCGAACAATAG

Upstream 100 bases:

>100_bases
CAAACCAGCGTGACAGGGCAGGGAAACCAGCGCTTGCAGTAGGGGGTCGTGCACGGGAATCTTACCGCATTGAGATACGT
TTTTTTAGGAGTTGCCCGCC

Downstream 100 bases:

>100_bases
ATTTATATTCAACGATTTGCGGATCGACGTTAAAGCACAACTTCAAGCATCATCCGCCCTTGCCGGTGCCATGATCCGGT
CCGCCTTTTTGCGCACCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MRLPTFALSVLACLAAPLTAQEAFTWVYDAEFGFYPENSRLNLIATQDPALNVRSETGLPRGLIWATCLGEIDGGEIAIR
FESFAGAAQNWDTVPFTLSGSSGATFNMTGEVRDAGPDPVGGVEILVLAGGLEMQMLATSDIVTYGVTGLDDFITAFDLS
ANRAYVGEFDAHCSGVAPGGALQRQPSSGSALAPLSGPVPDFGPAISGHDWARFTDIRDDVFQTILNVRYGVPQTDDVLI
VGECNIGAQGPLVALQVSADVEGLVEHAPATLRIRSSDGRSVDVDGSVVGTEAELGILGIEVVLAPSDPAWQVIAGDEIV
QFERVGGRDGFVLTGDGPGTLGPFLTDCDQIGDLTPEGGTSPGAPAGEQGGSVSCDALGQVVSADTGQPMVLTFRNQSGV
FRGLSWIGADGVPLDQGGLNAGEVVSFNTDPGHIWMATDGPGNCREMIQPVSGQIDYILTEQ

Sequences:

>Translated_462_residues
MRLPTFALSVLACLAAPLTAQEAFTWVYDAEFGFYPENSRLNLIATQDPALNVRSETGLPRGLIWATCLGEIDGGEIAIR
FESFAGAAQNWDTVPFTLSGSSGATFNMTGEVRDAGPDPVGGVEILVLAGGLEMQMLATSDIVTYGVTGLDDFITAFDLS
ANRAYVGEFDAHCSGVAPGGALQRQPSSGSALAPLSGPVPDFGPAISGHDWARFTDIRDDVFQTILNVRYGVPQTDDVLI
VGECNIGAQGPLVALQVSADVEGLVEHAPATLRIRSSDGRSVDVDGSVVGTEAELGILGIEVVLAPSDPAWQVIAGDEIV
QFERVGGRDGFVLTGDGPGTLGPFLTDCDQIGDLTPEGGTSPGAPAGEQGGSVSCDALGQVVSADTGQPMVLTFRNQSGV
FRGLSWIGADGVPLDQGGLNAGEVVSFNTDPGHIWMATDGPGNCREMIQPVSGQIDYILTEQ
>Mature_462_residues
MRLPTFALSVLACLAAPLTAQEAFTWVYDAEFGFYPENSRLNLIATQDPALNVRSETGLPRGLIWATCLGEIDGGEIAIR
FESFAGAAQNWDTVPFTLSGSSGATFNMTGEVRDAGPDPVGGVEILVLAGGLEMQMLATSDIVTYGVTGLDDFITAFDLS
ANRAYVGEFDAHCSGVAPGGALQRQPSSGSALAPLSGPVPDFGPAISGHDWARFTDIRDDVFQTILNVRYGVPQTDDVLI
VGECNIGAQGPLVALQVSADVEGLVEHAPATLRIRSSDGRSVDVDGSVVGTEAELGILGIEVVLAPSDPAWQVIAGDEIV
QFERVGGRDGFVLTGDGPGTLGPFLTDCDQIGDLTPEGGTSPGAPAGEQGGSVSCDALGQVVSADTGQPMVLTFRNQSGV
FRGLSWIGADGVPLDQGGLNAGEVVSFNTDPGHIWMATDGPGNCREMIQPVSGQIDYILTEQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48005; Mature: 48005

Theoretical pI: Translated: 3.78; Mature: 3.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLPTFALSVLACLAAPLTAQEAFTWVYDAEFGFYPENSRLNLIATQDPALNVRSETGLP
CCCCHHHHHHHHHHHCCCCHHHEEEEEEECCCCCCCCCCCEEEEEECCCCEEEHHCCCCC
RGLIWATCLGEIDGGEIAIRFESFAGAAQNWDTVPFTLSGSSGATFNMTGEVRDAGPDPV
CCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCC
GGVEILVLAGGLEMQMLATSDIVTYGVTGLDDFITAFDLSANRAYVGEFDAHCSGVAPGG
CCEEEEEEECCCEEEEEECCCEEEECCCCHHHHHHHEECCCCEEEEECCCCCCCCCCCCC
ALQRQPSSGSALAPLSGPVPDFGPAISGHDWARFTDIRDDVFQTILNVRYGVPQTDDVLI
CCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
VGECNIGAQGPLVALQVSADVEGLVEHAPATLRIRSSDGRSVDVDGSVVGTEAELGILGI
EEECCCCCCCCEEEEEECCCHHHHHHCCCEEEEEECCCCCEEECCCCEECCCCCEEEEEE
EVVLAPSDPAWQVIAGDEIVQFERVGGRDGFVLTGDGPGTLGPFLTDCDQIGDLTPEGGT
EEEEECCCCCEEEEECCCEEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCC
SPGAPAGEQGGSVSCDALGQVVSADTGQPMVLTFRNQSGVFRGLSWIGADGVPLDQGGLN
CCCCCCCCCCCCEEHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHEECCCCCCCCCCCCC
AGEVVSFNTDPGHIWMATDGPGNCREMIQPVSGQIDYILTEQ
CCCEEEECCCCCEEEEEECCCCCHHHHHCCCCCCEEEEEECC
>Mature Secondary Structure
MRLPTFALSVLACLAAPLTAQEAFTWVYDAEFGFYPENSRLNLIATQDPALNVRSETGLP
CCCCHHHHHHHHHHHCCCCHHHEEEEEEECCCCCCCCCCCEEEEEECCCCEEEHHCCCCC
RGLIWATCLGEIDGGEIAIRFESFAGAAQNWDTVPFTLSGSSGATFNMTGEVRDAGPDPV
CCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCC
GGVEILVLAGGLEMQMLATSDIVTYGVTGLDDFITAFDLSANRAYVGEFDAHCSGVAPGG
CCEEEEEEECCCEEEEEECCCEEEECCCCHHHHHHHEECCCCEEEEECCCCCCCCCCCCC
ALQRQPSSGSALAPLSGPVPDFGPAISGHDWARFTDIRDDVFQTILNVRYGVPQTDDVLI
CCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
VGECNIGAQGPLVALQVSADVEGLVEHAPATLRIRSSDGRSVDVDGSVVGTEAELGILGI
EEECCCCCCCCEEEEEECCCHHHHHHCCCEEEEEECCCCCEEECCCCEECCCCCEEEEEE
EVVLAPSDPAWQVIAGDEIVQFERVGGRDGFVLTGDGPGTLGPFLTDCDQIGDLTPEGGT
EEEEECCCCCEEEEECCCEEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCC
SPGAPAGEQGGSVSCDALGQVVSADTGQPMVLTFRNQSGVFRGLSWIGADGVPLDQGGLN
CCCCCCCCCCCCEEHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHEECCCCCCCCCCCCC
AGEVVSFNTDPGHIWMATDGPGNCREMIQPVSGQIDYILTEQ
CCCEEEECCCCCEEEEEECCCCCHHHHHCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA