| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055152
Identifier: 89055152
GI number: 89055152
Start: 2670683
End: 2672071
Strand: Reverse
Name: 89055152
Synonym: Jann_2661
Alternate gene names: NA
Gene position: 2672071-2670683 (Counterclockwise)
Preceding gene: 89055153
Following gene: 89055146
Centisome position: 61.88
GC content: 62.92
Gene sequence:
>1389_bases ATGCGATTGCCCACCTTTGCCCTGTCCGTTCTAGCGTGCCTCGCGGCGCCTTTGACCGCACAGGAAGCGTTTACCTGGGT CTATGATGCTGAATTTGGGTTTTACCCCGAGAACTCGCGCCTGAATCTGATCGCCACGCAAGACCCAGCCCTGAATGTGC GGTCCGAGACCGGTCTGCCCCGGGGCCTGATCTGGGCCACCTGTCTGGGGGAGATCGACGGCGGCGAGATTGCCATCCGG TTTGAGAGTTTCGCGGGGGCTGCCCAAAACTGGGACACGGTGCCGTTCACCCTGTCGGGGTCGTCCGGCGCAACGTTCAA CATGACCGGTGAGGTGCGCGACGCAGGCCCCGACCCGGTCGGCGGGGTGGAAATACTGGTCCTGGCGGGCGGCCTCGAAA TGCAGATGCTGGCCACGTCAGATATCGTGACCTACGGGGTGACCGGATTGGACGATTTCATCACGGCGTTCGATCTGTCC GCGAACCGCGCCTATGTTGGCGAATTCGATGCCCATTGCAGCGGCGTGGCCCCCGGCGGCGCGTTGCAACGACAGCCTTC GTCCGGCTCCGCCTTGGCACCATTGTCCGGTCCCGTGCCTGATTTCGGACCAGCGATCTCAGGCCATGATTGGGCGCGGT TTACCGATATCCGCGACGATGTGTTCCAAACCATCCTGAATGTGCGCTACGGGGTGCCGCAGACCGATGACGTGCTTATC GTGGGGGAGTGCAACATTGGGGCCCAGGGGCCGTTGGTCGCGTTGCAAGTCAGTGCAGATGTCGAAGGACTGGTTGAGCA CGCGCCCGCCACCCTGCGCATCCGGTCCAGCGATGGCAGGTCCGTGGATGTGGATGGCAGTGTCGTCGGCACGGAGGCAG AGCTTGGCATTCTGGGGATCGAGGTGGTGTTGGCCCCCTCCGACCCCGCATGGCAGGTGATCGCCGGCGATGAGATTGTG CAGTTTGAACGCGTGGGCGGTCGCGATGGCTTTGTACTGACAGGTGACGGGCCGGGCACTCTGGGGCCGTTTCTGACCGA TTGCGACCAGATCGGGGACCTGACACCAGAAGGCGGCACCAGCCCCGGCGCACCGGCGGGTGAGCAAGGTGGATCCGTGT CCTGTGACGCTCTGGGGCAGGTGGTGTCGGCTGATACCGGGCAGCCAATGGTTCTGACCTTTCGCAATCAAAGCGGGGTC TTCCGTGGTCTGTCGTGGATCGGAGCCGATGGCGTGCCCCTTGATCAGGGTGGCCTGAATGCGGGCGAGGTGGTGAGCTT CAACACCGATCCCGGCCACATCTGGATGGCGACCGATGGACCGGGGAATTGCCGTGAGATGATCCAGCCCGTATCTGGCC AGATCGACTATATTCTAACCGAACAATAG
Upstream 100 bases:
>100_bases CAAACCAGCGTGACAGGGCAGGGAAACCAGCGCTTGCAGTAGGGGGTCGTGCACGGGAATCTTACCGCATTGAGATACGT TTTTTTAGGAGTTGCCCGCC
Downstream 100 bases:
>100_bases ATTTATATTCAACGATTTGCGGATCGACGTTAAAGCACAACTTCAAGCATCATCCGCCCTTGCCGGTGCCATGATCCGGT CCGCCTTTTTGCGCACCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 462; Mature: 462
Protein sequence:
>462_residues MRLPTFALSVLACLAAPLTAQEAFTWVYDAEFGFYPENSRLNLIATQDPALNVRSETGLPRGLIWATCLGEIDGGEIAIR FESFAGAAQNWDTVPFTLSGSSGATFNMTGEVRDAGPDPVGGVEILVLAGGLEMQMLATSDIVTYGVTGLDDFITAFDLS ANRAYVGEFDAHCSGVAPGGALQRQPSSGSALAPLSGPVPDFGPAISGHDWARFTDIRDDVFQTILNVRYGVPQTDDVLI VGECNIGAQGPLVALQVSADVEGLVEHAPATLRIRSSDGRSVDVDGSVVGTEAELGILGIEVVLAPSDPAWQVIAGDEIV QFERVGGRDGFVLTGDGPGTLGPFLTDCDQIGDLTPEGGTSPGAPAGEQGGSVSCDALGQVVSADTGQPMVLTFRNQSGV FRGLSWIGADGVPLDQGGLNAGEVVSFNTDPGHIWMATDGPGNCREMIQPVSGQIDYILTEQ
Sequences:
>Translated_462_residues MRLPTFALSVLACLAAPLTAQEAFTWVYDAEFGFYPENSRLNLIATQDPALNVRSETGLPRGLIWATCLGEIDGGEIAIR FESFAGAAQNWDTVPFTLSGSSGATFNMTGEVRDAGPDPVGGVEILVLAGGLEMQMLATSDIVTYGVTGLDDFITAFDLS ANRAYVGEFDAHCSGVAPGGALQRQPSSGSALAPLSGPVPDFGPAISGHDWARFTDIRDDVFQTILNVRYGVPQTDDVLI VGECNIGAQGPLVALQVSADVEGLVEHAPATLRIRSSDGRSVDVDGSVVGTEAELGILGIEVVLAPSDPAWQVIAGDEIV QFERVGGRDGFVLTGDGPGTLGPFLTDCDQIGDLTPEGGTSPGAPAGEQGGSVSCDALGQVVSADTGQPMVLTFRNQSGV FRGLSWIGADGVPLDQGGLNAGEVVSFNTDPGHIWMATDGPGNCREMIQPVSGQIDYILTEQ >Mature_462_residues MRLPTFALSVLACLAAPLTAQEAFTWVYDAEFGFYPENSRLNLIATQDPALNVRSETGLPRGLIWATCLGEIDGGEIAIR FESFAGAAQNWDTVPFTLSGSSGATFNMTGEVRDAGPDPVGGVEILVLAGGLEMQMLATSDIVTYGVTGLDDFITAFDLS ANRAYVGEFDAHCSGVAPGGALQRQPSSGSALAPLSGPVPDFGPAISGHDWARFTDIRDDVFQTILNVRYGVPQTDDVLI VGECNIGAQGPLVALQVSADVEGLVEHAPATLRIRSSDGRSVDVDGSVVGTEAELGILGIEVVLAPSDPAWQVIAGDEIV QFERVGGRDGFVLTGDGPGTLGPFLTDCDQIGDLTPEGGTSPGAPAGEQGGSVSCDALGQVVSADTGQPMVLTFRNQSGV FRGLSWIGADGVPLDQGGLNAGEVVSFNTDPGHIWMATDGPGNCREMIQPVSGQIDYILTEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48005; Mature: 48005
Theoretical pI: Translated: 3.78; Mature: 3.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLPTFALSVLACLAAPLTAQEAFTWVYDAEFGFYPENSRLNLIATQDPALNVRSETGLP CCCCHHHHHHHHHHHCCCCHHHEEEEEEECCCCCCCCCCCEEEEEECCCCEEEHHCCCCC RGLIWATCLGEIDGGEIAIRFESFAGAAQNWDTVPFTLSGSSGATFNMTGEVRDAGPDPV CCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCC GGVEILVLAGGLEMQMLATSDIVTYGVTGLDDFITAFDLSANRAYVGEFDAHCSGVAPGG CCEEEEEEECCCEEEEEECCCEEEECCCCHHHHHHHEECCCCEEEEECCCCCCCCCCCCC ALQRQPSSGSALAPLSGPVPDFGPAISGHDWARFTDIRDDVFQTILNVRYGVPQTDDVLI CCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEE VGECNIGAQGPLVALQVSADVEGLVEHAPATLRIRSSDGRSVDVDGSVVGTEAELGILGI EEECCCCCCCCEEEEEECCCHHHHHHCCCEEEEEECCCCCEEECCCCEECCCCCEEEEEE EVVLAPSDPAWQVIAGDEIVQFERVGGRDGFVLTGDGPGTLGPFLTDCDQIGDLTPEGGT EEEEECCCCCEEEEECCCEEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCC SPGAPAGEQGGSVSCDALGQVVSADTGQPMVLTFRNQSGVFRGLSWIGADGVPLDQGGLN CCCCCCCCCCCCEEHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHEECCCCCCCCCCCCC AGEVVSFNTDPGHIWMATDGPGNCREMIQPVSGQIDYILTEQ CCCEEEECCCCCEEEEEECCCCCHHHHHCCCCCCEEEEEECC >Mature Secondary Structure MRLPTFALSVLACLAAPLTAQEAFTWVYDAEFGFYPENSRLNLIATQDPALNVRSETGLP CCCCHHHHHHHHHHHCCCCHHHEEEEEEECCCCCCCCCCCEEEEEECCCCEEEHHCCCCC RGLIWATCLGEIDGGEIAIRFESFAGAAQNWDTVPFTLSGSSGATFNMTGEVRDAGPDPV CCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCC GGVEILVLAGGLEMQMLATSDIVTYGVTGLDDFITAFDLSANRAYVGEFDAHCSGVAPGG CCEEEEEEECCCEEEEEECCCEEEECCCCHHHHHHHEECCCCEEEEECCCCCCCCCCCCC ALQRQPSSGSALAPLSGPVPDFGPAISGHDWARFTDIRDDVFQTILNVRYGVPQTDDVLI CCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEE VGECNIGAQGPLVALQVSADVEGLVEHAPATLRIRSSDGRSVDVDGSVVGTEAELGILGI EEECCCCCCCCEEEEEECCCHHHHHHCCCEEEEEECCCCCEEECCCCEECCCCCEEEEEE EVVLAPSDPAWQVIAGDEIVQFERVGGRDGFVLTGDGPGTLGPFLTDCDQIGDLTPEGGT EEEEECCCCCEEEEECCCEEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCC SPGAPAGEQGGSVSCDALGQVVSADTGQPMVLTFRNQSGVFRGLSWIGADGVPLDQGGLN CCCCCCCCCCCCEEHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHEECCCCCCCCCCCCC AGEVVSFNTDPGHIWMATDGPGNCREMIQPVSGQIDYILTEQ CCCEEEECCCCCEEEEEECCCCCHHHHHCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA