Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055146

Identifier: 89055146

GI number: 89055146

Start: 2667622

End: 2668023

Strand: Reverse

Name: 89055146

Synonym: Jann_2655

Alternate gene names: NA

Gene position: 2668023-2667622 (Counterclockwise)

Preceding gene: 89055152

Following gene: 89055144

Centisome position: 61.79

GC content: 58.71

Gene sequence:

>402_bases
ATGCAAATGTCTTCTGTTAACATTCCGATCGTGGCTTCAGGTGGCCTGTATATTGCCACAGCCGCTATTCACGCGTTCAT
GGGCGGACCTGAGATCAATGCGCCCATTCAGGCGAGCGATTTGCACCCGTTTATCCGCGCCATATCAGCAGTGATCTGGC
ATGCTCTGACGGCGCTGTTCGTGATCTTCGGCGTTGCGTTGTTGTGGACCGCGCGCGACGGGAGCCGGGCCTTGATAGTG
ACCATTCTGGCCGTGACCTTGGCCTTCGTCGCGCTGTTCCTCGGGATTGGGATCGTCCTTTTGGGGACCGTCGGCGCGAT
GCTGCAATGGGTGTTGTTCGGAGCCATTGCCGCGACACTGATCTGGGGCCTGATACGCGCACCTGCGCCCGCATTTGCGT
AA

Upstream 100 bases:

>100_bases
GTGAGGCGATTTGTCATTCGTCGACCATACGGTTGCGTATTGTGCTATGCAATTCTTTCAACATACGGTGGCGTATGGAA
TCAATTCGAAAGGGGATCCG

Downstream 100 bases:

>100_bases
CGAAAAAAGAGCGCCCCAAGTGGGACGCCCGTTAAACTCATCGTATCGGACGGTTCAGGTCAGGGACGCGCAGAACGTCT
GGATGCGCGTGCAGGCCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MQMSSVNIPIVASGGLYIATAAIHAFMGGPEINAPIQASDLHPFIRAISAVIWHALTALFVIFGVALLWTARDGSRALIV
TILAVTLAFVALFLGIGIVLLGTVGAMLQWVLFGAIAATLIWGLIRAPAPAFA

Sequences:

>Translated_133_residues
MQMSSVNIPIVASGGLYIATAAIHAFMGGPEINAPIQASDLHPFIRAISAVIWHALTALFVIFGVALLWTARDGSRALIV
TILAVTLAFVALFLGIGIVLLGTVGAMLQWVLFGAIAATLIWGLIRAPAPAFA
>Mature_133_residues
MQMSSVNIPIVASGGLYIATAAIHAFMGGPEINAPIQASDLHPFIRAISAVIWHALTALFVIFGVALLWTARDGSRALIV
TILAVTLAFVALFLGIGIVLLGTVGAMLQWVLFGAIAATLIWGLIRAPAPAFA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13849; Mature: 13849

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQMSSVNIPIVASGGLYIATAAIHAFMGGPEINAPIQASDLHPFIRAISAVIWHALTALF
CCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VIFGVALLWTARDGSRALIVTILAVTLAFVALFLGIGIVLLGTVGAMLQWVLFGAIAATL
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IWGLIRAPAPAFA
HHHHHHCCCCCCC
>Mature Secondary Structure
MQMSSVNIPIVASGGLYIATAAIHAFMGGPEINAPIQASDLHPFIRAISAVIWHALTALF
CCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VIFGVALLWTARDGSRALIVTILAVTLAFVALFLGIGIVLLGTVGAMLQWVLFGAIAATL
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IWGLIRAPAPAFA
HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA