Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055153

Identifier: 89055153

GI number: 89055153

Start: 2672159

End: 2672662

Strand: Reverse

Name: 89055153

Synonym: Jann_2662

Alternate gene names: NA

Gene position: 2672662-2672159 (Counterclockwise)

Preceding gene: 89055159

Following gene: 89055152

Centisome position: 61.9

GC content: 66.87

Gene sequence:

>504_bases
ATGGGATTGCTACGCGGTGCAAGCCGATGGCGCAGGCCGGATCACCTTCGTCGACCAATGGGGCAATGCCACCTCCGGCG
CGCGGGTGCCGTGATGCGGCTGGACGACCTCAGGGGCCGTTGGAGCGTGGAGCGGGTGATCGAGGATCATCGCGCCGATC
TGACCGGGCGGTTCGAGGGAGAGGCCATCTGGTCACCCGACGCAAACGGTCTGGTCCAGACCGAGGTTGGCGTGCTGCAC
TATGGCAGCGCGTCTCCGATGCAGGCCACGCGGCGCTACCTCTGGCGCGCGCAGGGCGAGGGGATCGCCGTCTTTTTTGA
CGACGCCCGCCCGTTCCACATCGTCCCTGCGCCGGGGCAGGAGGCGCTGCACGACTGCCCGCCTGACACCTACCGCGTGC
GCTACGCTTTCACCGGCCTGGACGCCTTTACTACTGTCTGGCACGTCACCGGCCCGCGAAAGCACATGACCCTGACGACA
CGGTTTACCTGCAAACCAGCGTGA

Upstream 100 bases:

>100_bases
TCGCGTCTGGCCGGACGCGATACACCCATGCGGAGCCCACATGGGGATCTTGGCGGGTGGAAAACGACCAATATTGCAGC
CTTTGGCCGCCCGCGCCGAC

Downstream 100 bases:

>100_bases
CAGGGCAGGGAAACCAGCGCTTGCAGTAGGGGGTCGTGCACGGGAATCTTACCGCATTGAGATACGTTTTTTTAGGAGTT
GCCCGCCATGCGATTGCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MGLLRGASRWRRPDHLRRPMGQCHLRRAGAVMRLDDLRGRWSVERVIEDHRADLTGRFEGEAIWSPDANGLVQTEVGVLH
YGSASPMQATRRYLWRAQGEGIAVFFDDARPFHIVPAPGQEALHDCPPDTYRVRYAFTGLDAFTTVWHVTGPRKHMTLTT
RFTCKPA

Sequences:

>Translated_167_residues
MGLLRGASRWRRPDHLRRPMGQCHLRRAGAVMRLDDLRGRWSVERVIEDHRADLTGRFEGEAIWSPDANGLVQTEVGVLH
YGSASPMQATRRYLWRAQGEGIAVFFDDARPFHIVPAPGQEALHDCPPDTYRVRYAFTGLDAFTTVWHVTGPRKHMTLTT
RFTCKPA
>Mature_166_residues
GLLRGASRWRRPDHLRRPMGQCHLRRAGAVMRLDDLRGRWSVERVIEDHRADLTGRFEGEAIWSPDANGLVQTEVGVLHY
GSASPMQATRRYLWRAQGEGIAVFFDDARPFHIVPAPGQEALHDCPPDTYRVRYAFTGLDAFTTVWHVTGPRKHMTLTTR
FTCKPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19036; Mature: 18905

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLLRGASRWRRPDHLRRPMGQCHLRRAGAVMRLDDLRGRWSVERVIEDHRADLTGRFEG
CCCCCCCHHCCCCHHHHCCHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCCCEEECC
EAIWSPDANGLVQTEVGVLHYGSASPMQATRRYLWRAQGEGIAVFFDDARPFHIVPAPGQ
CEEECCCCCCEEEECCCEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCEEEECCCCH
EALHDCPPDTYRVRYAFTGLDAFTTVWHVTGPRKHMTLTTRFTCKPA
HHHHCCCCCCEEEEEEEECCHHHHEEEECCCCCCEEEEEEEEEECCC
>Mature Secondary Structure 
GLLRGASRWRRPDHLRRPMGQCHLRRAGAVMRLDDLRGRWSVERVIEDHRADLTGRFEG
CCCCCCHHCCCCHHHHCCHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCCCEEECC
EAIWSPDANGLVQTEVGVLHYGSASPMQATRRYLWRAQGEGIAVFFDDARPFHIVPAPGQ
CEEECCCCCCEEEECCCEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCEEEECCCCH
EALHDCPPDTYRVRYAFTGLDAFTTVWHVTGPRKHMTLTTRFTCKPA
HHHHCCCCCCEEEEEEEECCHHHHEEEECCCCCCEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA