Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is dicA [C]

Identifier: 89055144

GI number: 89055144

Start: 2665856

End: 2666257

Strand: Reverse

Name: dicA [C]

Synonym: Jann_2653

Alternate gene names: 89055144

Gene position: 2666257-2665856 (Counterclockwise)

Preceding gene: 89055146

Following gene: 89055143

Centisome position: 61.75

GC content: 64.68

Gene sequence:

>402_bases
ATGGAAGACCAGGCACACGACGGGACCACATGGTTCGATGCAGAGACCACGACCTTCGGCGACCGCGTCACCGGCGCACG
GGAAGCGGCGGGCCTGTCGCAGCCGGAATTGGCCAAGCGCCTGGGCGTGCGGGTCAAGACGATCCGCGCGTGGGAGCAGG
ACCAGTCTGAGCCGAGGGCCAATAAACTCGGCACCTTGGCGGGCATTCTGGGCGTGTCGATGATGTGGCTTCTGGCGGGG
CAGGGCGAAGGGCTCGATAGCCCCGAGCTGTCCGATCCGCTGGATGGAGACATTGAGAAGATCCTGATCGACCTGCGTCA
GATGCGGCAGGAGCAGGTGTCGCTGGCTGAGCGTATGGGGTTGATCGAGAAGCGCCTGCGCGCGGCGTTGGGCAATTCAT
GA

Upstream 100 bases:

>100_bases
CGTCCTTTGGGATGGAGCCCGCGCAAACGGGCCTATATTACGTGTAGGGGTTGCATAGAGCGGCCTTCAGGCGCGATCAA
CCTCTAGGAGGGACATTCCG

Downstream 100 bases:

>100_bases
GCGAGCCGCGTGAGATCCGCCTGAAACGGCTGCGCCTGCGGGCGTGGCATCGGGGCATCAAGGAAATGGACCTGATCCTG
GGCGGTTGGGCCGACCGGAA

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Helix-Turn-Helix Domain-Containing Protein; XRE Family Transcriptional Regulator; Transcription Regulator Protein; Transcriptional Regulator; Helix-Turn-Helix Domain Protein

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MEDQAHDGTTWFDAETTTFGDRVTGAREAAGLSQPELAKRLGVRVKTIRAWEQDQSEPRANKLGTLAGILGVSMMWLLAG
QGEGLDSPELSDPLDGDIEKILIDLRQMRQEQVSLAERMGLIEKRLRAALGNS

Sequences:

>Translated_133_residues
MEDQAHDGTTWFDAETTTFGDRVTGAREAAGLSQPELAKRLGVRVKTIRAWEQDQSEPRANKLGTLAGILGVSMMWLLAG
QGEGLDSPELSDPLDGDIEKILIDLRQMRQEQVSLAERMGLIEKRLRAALGNS
>Mature_133_residues
MEDQAHDGTTWFDAETTTFGDRVTGAREAAGLSQPELAKRLGVRVKTIRAWEQDQSEPRANKLGTLAGILGVSMMWLLAG
QGEGLDSPELSDPLDGDIEKILIDLRQMRQEQVSLAERMGLIEKRLRAALGNS

Specific function: This Protein Is A Repressor Of Division Inhibition Gene Dicb. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14605; Mature: 14605

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDQAHDGTTWFDAETTTFGDRVTGAREAAGLSQPELAKRLGVRVKTIRAWEQDQSEPRA
CCCCCCCCCEEECCCCCCCCCHHCCHHHHCCCCCHHHHHHHCCHHHHHHHHHHCCCCCHH
NKLGTLAGILGVSMMWLLAGQGEGLDSPELSDPLDGDIEKILIDLRQMRQEQVSLAERMG
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LIEKRLRAALGNS
HHHHHHHHHHCCC
>Mature Secondary Structure
MEDQAHDGTTWFDAETTTFGDRVTGAREAAGLSQPELAKRLGVRVKTIRAWEQDQSEPRA
CCCCCCCCCEEECCCCCCCCCHHCCHHHHCCCCCHHHHHHHCCHHHHHHHHHHCCCCCHH
NKLGTLAGILGVSMMWLLAGQGEGLDSPELSDPLDGDIEKILIDLRQMRQEQVSLAERMG
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LIEKRLRAALGNS
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA