Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055105

Identifier: 89055105

GI number: 89055105

Start: 2631129

End: 2633948

Strand: Reverse

Name: 89055105

Synonym: Jann_2614

Alternate gene names: NA

Gene position: 2633948-2631129 (Counterclockwise)

Preceding gene: 89055107

Following gene: 89055104

Centisome position: 61.0

GC content: 64.11

Gene sequence:

>2820_bases
TTGGAAAGTCTGCTGCTTCTTGCTGGTCTGATCGCTGTCGGCCTTCCCATTGCGGTGATTTACCTTTTGGTCGCAATGTC
GGGTGCGAAGGCGCGTATTGGCGTTCTGGAGGCGAAGCTGGCGCATCTGGCGGATGCATCAACCGATGCGCCGGATGCCG
AGCGCGCGCAGGACACGTCGTCGGTTGCGCCATCGTCAACGCCCGTCCCTCCGACCCAGCCTCCTCCAGCGCAGGCGGCA
CCGTCGCAAGACCCGGTCAGCAACCGCGCCTGGTCCGGCACCACATCAGCGAACCCGCTTTCGCCGGGCGTTCCGGATCC
AGAGGCCGTCAAGCCCGGTGCCGAGCCCGATGAGGCGCAGCACGTCCCGCGCGCAGTCGTCTTCCGCCAGGATCGGTTTG
CCGCAGCGGGGGCCTGGCTTCGCGACAATTGGTTCCTGGCCGTCGCCGCAATTTCCCTCGCGCTGGCGGGGATCTTCCTG
GTGCAATACGGCGTGGAGAACGGCCTTCTGACCCCGTTCTGGCGGGTTATGGGGGCTATCGCTCTGGGGCTGGCACTGGT
CACGGCCGGTGAGGTCACGCGCCGCCGGTTTGGCGATGACGCGCCTGTCGATGGGGCCGAAGGGCGCGACGCGAAGGTTG
CGTTCTTGCCGTCCACATTTGCCGGTGCCGGACTGATCGTGTTGTTTTCCGCGGTGCTGGCCGCCGCCCATCTCTACGGG
ATGATCGGCGATGGGGCGACGTTTGCCTGGTTGATAGTGGTGGCGGCCCTCAGCGTCGTTTTGGGTTGGTTTTATGGCCC
GTTCCTTACGCTTGTGGGGATCGTGGGCGCACTTCTCGCGCCGTTTCTGGTGGGCGGGTCCTCTGACACGCCGCAGCTTT
TCTATCTCTATTTCGGGATCGTGGCCGTGGTCGCCCTGCTGATCGACGCCGTTCGTCGATGGGCCTGGGTGTCGGTACTG
GGATTGGTCGGCGCCTTTGCCACCAGCACATACATCTTCTCGCTCGGGGCAGGGGATGTGGAGTTTCTTGCCTTTTCAAT
CGCGATGGTTTTTGCGGCGGTGATCCTGCCACCGCTCAAGCTATCGCCCGGACATAGCGGCTCCATGGTCGCCGAGGCGC
TGGCACGAACGCCTTCCAACGGTGTGCAATGGCCAGAGTTCCCGACCCGCCTGGCGTTCGGCACGATTGCGGCGGCGACC
GGTGCGGCCCTGCTGGTGGCCGCCAATGATCTGGGCGAGACCGAAGTCACGCTGGCCCTTGGCGCTATTTTCCTGATCTT
TGCGCTGGTGACCCTCTGGTCCCGCAAGGCCGTGGCGCTGAGCGATGGGGCGCTGTTCGCCCTCCCCGCCATCGTTGCGG
TCGTGGCGTTGCAGGCCACCGGCAACGGGACGCTTTTCGCGGCATTTCGGACCACCGTGGAAGGTGCGCCTGACGCAAGT
CCCGCGATGCAGGCGACGCTGCTGACAGGGCTTGGGGCAGCGTTGAGCTTTCTTGCCCTGCGCAGGGGTTTGATGGACGA
AACATACCCGGGCATCTGGTTGGCCGGATCGGCCATTGCAGCCCCGCTTGTCGTGTTAGTGCTGGAAAGCCAGTGGCACC
CCGCCGATATCCTCGGTGCCTACCCTTGGGCACTGCATGCGATGGCCATTGCGGCGGGCCTTGTTATGGCCACCGCCGTC
GTGGCACGGCGGGACCACACCCATCCGGCGCAAGCCTCCTACTTCGCACTGGCGGCCACCGTCATGATCACCCTGTCGCT
GGTTTTGGTGGTGTCGCTGACCGCCCTGACCCTTGCCATCGCGGCGCTTGTGTTGGCGTCCTCCTACGCCGATCGACGGT
TCAACCTGCCGTATCTGGGTGTGTTCGTGATTGGCGGGGCGCTGGCAATCGGCTGGCGTCTGGTCGTCGATCCCGGCTTC
ATGACGGCGTTCGAGATGCCGTATTGGGAAATCGCCCTGGTCTATCTGGGCTCCATTGGAGCGCTCGCGGCCTCTCACAC
CGTCTTGGCGTCGCGCGACCGCTGGCAGCCCCGGATCGTCGTCAGCAGTGCCGCCTGGCTGGCCGTCTCCGTTTTTGTAT
CGGTGCTTCTATGGAAGTGGATGAAGGGATTTGACATCGACGTCTCCCGGGCATTTGCGGGCCTGACTGCACTGGTGTGG
CTCAGCTCGGCCGCCGTTCAGCTGTGGCGTTTGCAGATCGGGGGACACTGGCTCTGGCGGATCCGCCTTGGTCTAGCGGG
TGTGACGGGCCTGATCGGTCTTGGTTGGCTTGGATGGGCGGTGGTCGTTCAAAACCCGCTGACGACATCCATACCCGTCC
GTGGGCCGTGGATCTTCGACACGCTTCTGGTGGCCTACGTGCTGCCCGCCATTCCCTTCGTGCTGATCGCGTGGAGGTAC
ACCCATCTGCCCCGGCTTGCTCGGATGGCCTCGGCCTGGGTGGCGGCGGGCCTCGGCGGGTTCTATGTGGCGCTGGAGAT
CCGGCGCTTCTGGCAGGGTGACATTCTGTCGGGCGGTGCCGTCCGCGACGCAGAGCTTTACAGCTACACAATTGCGCTTC
TGCTGACCTCGGTCATCGTGCTGTTCATCGCCTTTCTTCGCCGATCTCACCTGTTGCGACGGGTGGCGATTGCGGGGATC
GCGCTGACCATCGCGAAGGTCTTTCTGATTGATATGAGCGGGTTGACGGGGCTGTTGCGCGTCGTCTCGTTCCTTGGACT
GGGTCTTTCGATGGCGGGTCTCGCCTGGATCGTCCGGGTGATGAATGATCAATGGGAGACGCCTGATACCACCGGGTCTG
ACAACCCGAATGACGGTTAG

Upstream 100 bases:

>100_bases
ACGCTGAAGGTCAGCGGATCATGCACCTGACATCCAGAGAATTCTGATTTATCAACGCTTAAACCACTGCGCGCATTGCT
TAACAAAAGGACTGTCTGGT

Downstream 100 bases:

>100_bases
GTGGCTGCGGCGAACAGGAGGTCTTCCCGCGTGGCCTGCCTGGCGGGCTGCCAAGTGCGCGCCTCGGTAGGCGGGTCCAT
CGAAAGACTTGATGGACGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 939; Mature: 939

Protein sequence:

>939_residues
MESLLLLAGLIAVGLPIAVIYLLVAMSGAKARIGVLEAKLAHLADASTDAPDAERAQDTSSVAPSSTPVPPTQPPPAQAA
PSQDPVSNRAWSGTTSANPLSPGVPDPEAVKPGAEPDEAQHVPRAVVFRQDRFAAAGAWLRDNWFLAVAAISLALAGIFL
VQYGVENGLLTPFWRVMGAIALGLALVTAGEVTRRRFGDDAPVDGAEGRDAKVAFLPSTFAGAGLIVLFSAVLAAAHLYG
MIGDGATFAWLIVVAALSVVLGWFYGPFLTLVGIVGALLAPFLVGGSSDTPQLFYLYFGIVAVVALLIDAVRRWAWVSVL
GLVGAFATSTYIFSLGAGDVEFLAFSIAMVFAAVILPPLKLSPGHSGSMVAEALARTPSNGVQWPEFPTRLAFGTIAAAT
GAALLVAANDLGETEVTLALGAIFLIFALVTLWSRKAVALSDGALFALPAIVAVVALQATGNGTLFAAFRTTVEGAPDAS
PAMQATLLTGLGAALSFLALRRGLMDETYPGIWLAGSAIAAPLVVLVLESQWHPADILGAYPWALHAMAIAAGLVMATAV
VARRDHTHPAQASYFALAATVMITLSLVLVVSLTALTLAIAALVLASSYADRRFNLPYLGVFVIGGALAIGWRLVVDPGF
MTAFEMPYWEIALVYLGSIGALAASHTVLASRDRWQPRIVVSSAAWLAVSVFVSVLLWKWMKGFDIDVSRAFAGLTALVW
LSSAAVQLWRLQIGGHWLWRIRLGLAGVTGLIGLGWLGWAVVVQNPLTTSIPVRGPWIFDTLLVAYVLPAIPFVLIAWRY
THLPRLARMASAWVAAGLGGFYVALEIRRFWQGDILSGGAVRDAELYSYTIALLLTSVIVLFIAFLRRSHLLRRVAIAGI
ALTIAKVFLIDMSGLTGLLRVVSFLGLGLSMAGLAWIVRVMNDQWETPDTTGSDNPNDG

Sequences:

>Translated_939_residues
MESLLLLAGLIAVGLPIAVIYLLVAMSGAKARIGVLEAKLAHLADASTDAPDAERAQDTSSVAPSSTPVPPTQPPPAQAA
PSQDPVSNRAWSGTTSANPLSPGVPDPEAVKPGAEPDEAQHVPRAVVFRQDRFAAAGAWLRDNWFLAVAAISLALAGIFL
VQYGVENGLLTPFWRVMGAIALGLALVTAGEVTRRRFGDDAPVDGAEGRDAKVAFLPSTFAGAGLIVLFSAVLAAAHLYG
MIGDGATFAWLIVVAALSVVLGWFYGPFLTLVGIVGALLAPFLVGGSSDTPQLFYLYFGIVAVVALLIDAVRRWAWVSVL
GLVGAFATSTYIFSLGAGDVEFLAFSIAMVFAAVILPPLKLSPGHSGSMVAEALARTPSNGVQWPEFPTRLAFGTIAAAT
GAALLVAANDLGETEVTLALGAIFLIFALVTLWSRKAVALSDGALFALPAIVAVVALQATGNGTLFAAFRTTVEGAPDAS
PAMQATLLTGLGAALSFLALRRGLMDETYPGIWLAGSAIAAPLVVLVLESQWHPADILGAYPWALHAMAIAAGLVMATAV
VARRDHTHPAQASYFALAATVMITLSLVLVVSLTALTLAIAALVLASSYADRRFNLPYLGVFVIGGALAIGWRLVVDPGF
MTAFEMPYWEIALVYLGSIGALAASHTVLASRDRWQPRIVVSSAAWLAVSVFVSVLLWKWMKGFDIDVSRAFAGLTALVW
LSSAAVQLWRLQIGGHWLWRIRLGLAGVTGLIGLGWLGWAVVVQNPLTTSIPVRGPWIFDTLLVAYVLPAIPFVLIAWRY
THLPRLARMASAWVAAGLGGFYVALEIRRFWQGDILSGGAVRDAELYSYTIALLLTSVIVLFIAFLRRSHLLRRVAIAGI
ALTIAKVFLIDMSGLTGLLRVVSFLGLGLSMAGLAWIVRVMNDQWETPDTTGSDNPNDG
>Mature_939_residues
MESLLLLAGLIAVGLPIAVIYLLVAMSGAKARIGVLEAKLAHLADASTDAPDAERAQDTSSVAPSSTPVPPTQPPPAQAA
PSQDPVSNRAWSGTTSANPLSPGVPDPEAVKPGAEPDEAQHVPRAVVFRQDRFAAAGAWLRDNWFLAVAAISLALAGIFL
VQYGVENGLLTPFWRVMGAIALGLALVTAGEVTRRRFGDDAPVDGAEGRDAKVAFLPSTFAGAGLIVLFSAVLAAAHLYG
MIGDGATFAWLIVVAALSVVLGWFYGPFLTLVGIVGALLAPFLVGGSSDTPQLFYLYFGIVAVVALLIDAVRRWAWVSVL
GLVGAFATSTYIFSLGAGDVEFLAFSIAMVFAAVILPPLKLSPGHSGSMVAEALARTPSNGVQWPEFPTRLAFGTIAAAT
GAALLVAANDLGETEVTLALGAIFLIFALVTLWSRKAVALSDGALFALPAIVAVVALQATGNGTLFAAFRTTVEGAPDAS
PAMQATLLTGLGAALSFLALRRGLMDETYPGIWLAGSAIAAPLVVLVLESQWHPADILGAYPWALHAMAIAAGLVMATAV
VARRDHTHPAQASYFALAATVMITLSLVLVVSLTALTLAIAALVLASSYADRRFNLPYLGVFVIGGALAIGWRLVVDPGF
MTAFEMPYWEIALVYLGSIGALAASHTVLASRDRWQPRIVVSSAAWLAVSVFVSVLLWKWMKGFDIDVSRAFAGLTALVW
LSSAAVQLWRLQIGGHWLWRIRLGLAGVTGLIGLGWLGWAVVVQNPLTTSIPVRGPWIFDTLLVAYVLPAIPFVLIAWRY
THLPRLARMASAWVAAGLGGFYVALEIRRFWQGDILSGGAVRDAELYSYTIALLLTSVIVLFIAFLRRSHLLRRVAIAGI
ALTIAKVFLIDMSGLTGLLRVVSFLGLGLSMAGLAWIVRVMNDQWETPDTTGSDNPNDG

Specific function: Unknown

COG id: COG5373

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 98956; Mature: 98956

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESLLLLAGLIAVGLPIAVIYLLVAMSGAKARIGVLEAKLAHLADASTDAPDAERAQDTS
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCC
SVAPSSTPVPPTQPPPAQAAPSQDPVSNRAWSGTTSANPLSPGVPDPEAVKPGAEPDEAQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
HVPRAVVFRQDRFAAAGAWLRDNWFLAVAAISLALAGIFLVQYGVENGLLTPFWRVMGAI
HCCHHHHEECHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
ALGLALVTAGEVTRRRFGDDAPVDGAEGRDAKVAFLPSTFAGAGLIVLFSAVLAAAHLYG
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHCHHHHHHHHHHHHHHHHHHH
MIGDGATFAWLIVVAALSVVLGWFYGPFLTLVGIVGALLAPFLVGGSSDTPQLFYLYFGI
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
VAVVALLIDAVRRWAWVSVLGLVGAFATSTYIFSLGAGDVEFLAFSIAMVFAAVILPPLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHCCCCC
LSPGHSGSMVAEALARTPSNGVQWPEFPTRLAFGTIAAATGAALLVAANDLGETEVTLAL
CCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHH
GAIFLIFALVTLWSRKAVALSDGALFALPAIVAVVALQATGNGTLFAAFRTTVEGAPDAS
HHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHEECCCCEEEEEEEHHHCCCCCCC
PAMQATLLTGLGAALSFLALRRGLMDETYPGIWLAGSAIAAPLVVLVLESQWHPADILGA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHCCCCCHHHHHC
YPWALHAMAIAAGLVMATAVVARRDHTHPAQASYFALAATVMITLSLVLVVSLTALTLAI
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALVLASSYADRRFNLPYLGVFVIGGALAIGWRLVVDPGFMTAFEMPYWEIALVYLGSIG
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCEEEEECCCCHHHCCCCHHHHHHHHHHHHH
ALAASHTVLASRDRWQPRIVVSSAAWLAVSVFVSVLLWKWMKGFDIDVSRAFAGLTALVW
HHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LSSAAVQLWRLQIGGHWLWRIRLGLAGVTGLIGLGWLGWAVVVQNPLTTSIPVRGPWIFD
HHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
TLLVAYVLPAIPFVLIAWRYTHLPRLARMASAWVAAGLGGFYVALEIRRFWQGDILSGGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCC
VRDAELYSYTIALLLTSVIVLFIAFLRRSHLLRRVAIAGIALTIAKVFLIDMSGLTGLLR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVSFLGLGLSMAGLAWIVRVMNDQWETPDTTGSDNPNDG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MESLLLLAGLIAVGLPIAVIYLLVAMSGAKARIGVLEAKLAHLADASTDAPDAERAQDTS
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCC
SVAPSSTPVPPTQPPPAQAAPSQDPVSNRAWSGTTSANPLSPGVPDPEAVKPGAEPDEAQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
HVPRAVVFRQDRFAAAGAWLRDNWFLAVAAISLALAGIFLVQYGVENGLLTPFWRVMGAI
HCCHHHHEECHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
ALGLALVTAGEVTRRRFGDDAPVDGAEGRDAKVAFLPSTFAGAGLIVLFSAVLAAAHLYG
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHCHHHHHHHHHHHHHHHHHHH
MIGDGATFAWLIVVAALSVVLGWFYGPFLTLVGIVGALLAPFLVGGSSDTPQLFYLYFGI
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
VAVVALLIDAVRRWAWVSVLGLVGAFATSTYIFSLGAGDVEFLAFSIAMVFAAVILPPLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHCCCCC
LSPGHSGSMVAEALARTPSNGVQWPEFPTRLAFGTIAAATGAALLVAANDLGETEVTLAL
CCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHH
GAIFLIFALVTLWSRKAVALSDGALFALPAIVAVVALQATGNGTLFAAFRTTVEGAPDAS
HHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHEECCCCEEEEEEEHHHCCCCCCC
PAMQATLLTGLGAALSFLALRRGLMDETYPGIWLAGSAIAAPLVVLVLESQWHPADILGA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHCCCCCHHHHHC
YPWALHAMAIAAGLVMATAVVARRDHTHPAQASYFALAATVMITLSLVLVVSLTALTLAI
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALVLASSYADRRFNLPYLGVFVIGGALAIGWRLVVDPGFMTAFEMPYWEIALVYLGSIG
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCEEEEECCCCHHHCCCCHHHHHHHHHHHHH
ALAASHTVLASRDRWQPRIVVSSAAWLAVSVFVSVLLWKWMKGFDIDVSRAFAGLTALVW
HHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LSSAAVQLWRLQIGGHWLWRIRLGLAGVTGLIGLGWLGWAVVVQNPLTTSIPVRGPWIFD
HHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
TLLVAYVLPAIPFVLIAWRYTHLPRLARMASAWVAAGLGGFYVALEIRRFWQGDILSGGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCC
VRDAELYSYTIALLLTSVIVLFIAFLRRSHLLRRVAIAGIALTIAKVFLIDMSGLTGLLR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVSFLGLGLSMAGLAWIVRVMNDQWETPDTTGSDNPNDG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA