| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is dhbF [H]
Identifier: 89055107
GI number: 89055107
Start: 2635047
End: 2637761
Strand: Reverse
Name: dhbF [H]
Synonym: Jann_2616
Alternate gene names: 89055107
Gene position: 2637761-2635047 (Counterclockwise)
Preceding gene: 89055117
Following gene: 89055105
Centisome position: 61.09
GC content: 67.07
Gene sequence:
>2715_bases ATGTCAGATCGCGATCGCACGGTCACCTATGGCGGGCTTGGCCAGTTCGCGACACAACTGGGCGTGCATCTGGAAACGCC GCAGGTTGTGGGCGTCTTTGGCGCGCCGGGCGTTGCCATGGCGGCGAGTGCGGTGGCCTGCGTGGTCCATGGCCGCCCCT TTGTGCACCTTGACCCGGCCATGCCGCAGATGGTGCTGCACAATATCGTCTCGGAATTGCAGGTCAGCCTGATTGTCACC TGCCAGCGCGCGGATCCGGGGCAGCTGCCCCGCGACTGCGCCACGATCGACGCCAATGACCTGCTGAATGCCGCGCCCGC GCCGTATGCTCCGCTGCAAGCGGCCCCCGTTGCGCCGGACGATCCCATCTATCTGGTGGCCACGTCCGGCACGACGGGGC GCCCCAAGTGCATTCCCGTGGCCCAGGACGCGGCCTATCTGTCGTATGCTTGGCGCGACGCGTTCACGCCCTACGGCCCG GACACGCGCGTCGGTATCTATGTCTTCGCGATCTGGGAGATGTTCCGCCCGCTGCGCAAGGGGGCGGGGCTGTGGTTTCC CGATGCCAGCACGTTGTTCGCGCCGGGACAGCTGGCCGATTTTCTGATCGCCCACGATATCGACGAGATGCTGTTCACGC CGTCGTTCTACGACACGTTCCTGAATGCGCTGGACGGCGACAAGGCGGCGGCCCTTCCCCTCAGCCGGGTGATCCTGAAC GGCGAGGTTGTCGGCGATGACCTGATCATCGCGTCGCTGGCCAAGCTGCCGGGCACGGCGCTGTGGAACCTCTACAGCAT CTGCGAGACCCATGATGTCTGCATGTCCCATCTGACAGAACCCGCTGGCGATGGGCCCGCGTCGGTGGGTGTCCCGATGG AGCATCTGCGCGCCGTCATTCTGGATCAGGCCGACGCCCCATGCCCGCCCGGCACCTCGGGCCAGCTGCATTTCGAGGGG CCAAGGATGCTGGGGCCCGGCTACGTCAACCGGCCCGAGGAAACCCGCCTGCGGTTTCGCGAGGTGACGCTTCAGGGGCG TGAGACGCGCCTTTACGACACCGGCGATCAGGCGTGGGTGGATGCCACCGGTGCGCTGCATATCGAGGGGCGCATCGCCC ATATGCTGAAGCTGCGCGGGTTCTCGGTCCAGACGCGGGAGCTGACGGACACGATGCGCGACCGGCTGGCGTTTTCCAGC GCCGCGCCCTGGGTGGCAGAGGTCGGCGCGCGCGGTCAAAGCCTGATCTTCTACTTCGCCGCTGACGCCGCACAGGCAAG GCGCAATGCGGAACAATGGGGCCTGAAGGCGGGAACCAACAAGATGCCAGCGGCCCTTGCCGCCGATCTGCGCGCCGTGT TGCCGGCCTATTGCGTGCCGTCGTTCCTCGTGCAGATGGACGCGCTGCCCCTGCATCCCGTGTCGGGCAAGGCGGATCTG CGCGCGCTGCCTGCGGTTGAGGAGGACGACCACGGATCAGACTTCGCTGAGGATGCCGTGATTGCCGCCGCCGCCCTCGC CATGTCCTGTGCGCCGTCGCAGATCGACCCGGCGCTGAGTTTCCACGATCAGGGTGGCGATTCACTGATGTGCGTGACCC TGATGCTGGAGCTGGAGAAGACCTACGGCCTGCCCATCGACTTCGATCTGGCGATGAATGTGCCGCTGCACCGGCTCGAC CAGTTGATGACGCAGGAGGCCGACGCCCCCGCCCCGGCGGAAGACTTCGGCCGCCCGGGCATCCTTTTGACCGGCGCGAC GGGGTTTCTGGGTGGCCATGTTCTGGCAAAAGCGGCACGCGATCTGCCGGAGGGAGAGGTCGTTTATTGCCTTGTCAGAG ACAAGAACCGGGGGGCCAGGGACCGGCTGGATGAGGCGGCGCAGTCCCATGGGGTCGCCCCTGATCGCTACGTGATCGTC CATGGCACCCTGGATGCGCCCCGCTTCGCTTTGGAGGCCGATGCCTATGCCGCGTTGAGCGGTTCGGTCAGCCGCGTCAT CCACTGCGCGGCGATGGTGAACCTCGCCATCGGGCGGCAGGAGATGCTGGATTGGTCGGCGCGCGGGATGGACACCGTCC TGACCTTCTGCGCCGATGCCCGGGCCGACCTGCGCTTCACCTCCTCAAGCGCGGTCTTCCCGGACCGGGGCGGGCCGTGG CCCGAAGCTCCCGCGACCCCGTGGGACGGCTGCACCGGCTATGGCGCGGCCAAGATCGCGGCGGAGGCGGCAATTCGCGC CGCCGACATCCCGGCGGCCATCGTGCGCCTGCCGTCGCTCTATGATCTGGACGCGCCCAACCCGCGCGACATCTATGAGA TCATCCTCAAGGCGTCCCTGCGCGCGGGCCACATGCCGCAGGCGCTTGAATTTCCGATGACCGATGTGACCGCCGCCGCC GCCTTCCTGCTCGGCCCGATCACGGCCCCGGACGCCCCGATCTACAACCTGATGGCCGATGCGCGCATCGCGCCGGACGA CCCAAACGCGCTGCCCGCGACGGACTGGCTGGCCAGGGTCACACTGGACCCCGGCATCGCCAAGGTCATCGCCGACTTCC CCGACACCCTTTGCGCCTCTTCCGACTTTGAGAACACAGCCGCCCGTGCTGCTTGGGAACGGGTCAGCGCCCTTCCATTC AACGAAATCAGTGACAGCGAAGCCCTGCTAACGCGCCGCGCCCGCGACTACCAAAGCGATCCCGCGTTGACCTGA
Upstream 100 bases:
>100_bases ACGTCTGCGGGAACACACAGGGGCTGATTTCATGATTTCAACTCAGACCGTCGCCGCCGAGCTTGTTCGCGCCATCACGG ATTTTGCGGATCTGGCCGCC
Downstream 100 bases:
>100_bases TAATCTTCCATGGTCAGCGCGCGGGCGGCGTCGCTGGCCAGAAAGGCGGCAAGCTCGGCCACTTCGGTGGGCTGAACAAG CTGGTTTTGCGGGTTCGACT
Product: AMP-dependent synthetase and ligase
Products: pyrophosphate; AMP; enterobactin; pyrophosphate; L-Seryl-AMP [C]
Alternate protein names: NA
Number of amino acids: Translated: 904; Mature: 903
Protein sequence:
>904_residues MSDRDRTVTYGGLGQFATQLGVHLETPQVVGVFGAPGVAMAASAVACVVHGRPFVHLDPAMPQMVLHNIVSELQVSLIVT CQRADPGQLPRDCATIDANDLLNAAPAPYAPLQAAPVAPDDPIYLVATSGTTGRPKCIPVAQDAAYLSYAWRDAFTPYGP DTRVGIYVFAIWEMFRPLRKGAGLWFPDASTLFAPGQLADFLIAHDIDEMLFTPSFYDTFLNALDGDKAAALPLSRVILN GEVVGDDLIIASLAKLPGTALWNLYSICETHDVCMSHLTEPAGDGPASVGVPMEHLRAVILDQADAPCPPGTSGQLHFEG PRMLGPGYVNRPEETRLRFREVTLQGRETRLYDTGDQAWVDATGALHIEGRIAHMLKLRGFSVQTRELTDTMRDRLAFSS AAPWVAEVGARGQSLIFYFAADAAQARRNAEQWGLKAGTNKMPAALAADLRAVLPAYCVPSFLVQMDALPLHPVSGKADL RALPAVEEDDHGSDFAEDAVIAAAALAMSCAPSQIDPALSFHDQGGDSLMCVTLMLELEKTYGLPIDFDLAMNVPLHRLD QLMTQEADAPAPAEDFGRPGILLTGATGFLGGHVLAKAARDLPEGEVVYCLVRDKNRGARDRLDEAAQSHGVAPDRYVIV HGTLDAPRFALEADAYAALSGSVSRVIHCAAMVNLAIGRQEMLDWSARGMDTVLTFCADARADLRFTSSSAVFPDRGGPW PEAPATPWDGCTGYGAAKIAAEAAIRAADIPAAIVRLPSLYDLDAPNPRDIYEIILKASLRAGHMPQALEFPMTDVTAAA AFLLGPITAPDAPIYNLMADARIAPDDPNALPATDWLARVTLDPGIAKVIADFPDTLCASSDFENTAARAAWERVSALPF NEISDSEALLTRRARDYQSDPALT
Sequences:
>Translated_904_residues MSDRDRTVTYGGLGQFATQLGVHLETPQVVGVFGAPGVAMAASAVACVVHGRPFVHLDPAMPQMVLHNIVSELQVSLIVT CQRADPGQLPRDCATIDANDLLNAAPAPYAPLQAAPVAPDDPIYLVATSGTTGRPKCIPVAQDAAYLSYAWRDAFTPYGP DTRVGIYVFAIWEMFRPLRKGAGLWFPDASTLFAPGQLADFLIAHDIDEMLFTPSFYDTFLNALDGDKAAALPLSRVILN GEVVGDDLIIASLAKLPGTALWNLYSICETHDVCMSHLTEPAGDGPASVGVPMEHLRAVILDQADAPCPPGTSGQLHFEG PRMLGPGYVNRPEETRLRFREVTLQGRETRLYDTGDQAWVDATGALHIEGRIAHMLKLRGFSVQTRELTDTMRDRLAFSS AAPWVAEVGARGQSLIFYFAADAAQARRNAEQWGLKAGTNKMPAALAADLRAVLPAYCVPSFLVQMDALPLHPVSGKADL RALPAVEEDDHGSDFAEDAVIAAAALAMSCAPSQIDPALSFHDQGGDSLMCVTLMLELEKTYGLPIDFDLAMNVPLHRLD QLMTQEADAPAPAEDFGRPGILLTGATGFLGGHVLAKAARDLPEGEVVYCLVRDKNRGARDRLDEAAQSHGVAPDRYVIV HGTLDAPRFALEADAYAALSGSVSRVIHCAAMVNLAIGRQEMLDWSARGMDTVLTFCADARADLRFTSSSAVFPDRGGPW PEAPATPWDGCTGYGAAKIAAEAAIRAADIPAAIVRLPSLYDLDAPNPRDIYEIILKASLRAGHMPQALEFPMTDVTAAA AFLLGPITAPDAPIYNLMADARIAPDDPNALPATDWLARVTLDPGIAKVIADFPDTLCASSDFENTAARAAWERVSALPF NEISDSEALLTRRARDYQSDPALT >Mature_903_residues SDRDRTVTYGGLGQFATQLGVHLETPQVVGVFGAPGVAMAASAVACVVHGRPFVHLDPAMPQMVLHNIVSELQVSLIVTC QRADPGQLPRDCATIDANDLLNAAPAPYAPLQAAPVAPDDPIYLVATSGTTGRPKCIPVAQDAAYLSYAWRDAFTPYGPD TRVGIYVFAIWEMFRPLRKGAGLWFPDASTLFAPGQLADFLIAHDIDEMLFTPSFYDTFLNALDGDKAAALPLSRVILNG EVVGDDLIIASLAKLPGTALWNLYSICETHDVCMSHLTEPAGDGPASVGVPMEHLRAVILDQADAPCPPGTSGQLHFEGP RMLGPGYVNRPEETRLRFREVTLQGRETRLYDTGDQAWVDATGALHIEGRIAHMLKLRGFSVQTRELTDTMRDRLAFSSA APWVAEVGARGQSLIFYFAADAAQARRNAEQWGLKAGTNKMPAALAADLRAVLPAYCVPSFLVQMDALPLHPVSGKADLR ALPAVEEDDHGSDFAEDAVIAAAALAMSCAPSQIDPALSFHDQGGDSLMCVTLMLELEKTYGLPIDFDLAMNVPLHRLDQ LMTQEADAPAPAEDFGRPGILLTGATGFLGGHVLAKAARDLPEGEVVYCLVRDKNRGARDRLDEAAQSHGVAPDRYVIVH GTLDAPRFALEADAYAALSGSVSRVIHCAAMVNLAIGRQEMLDWSARGMDTVLTFCADARADLRFTSSSAVFPDRGGPWP EAPATPWDGCTGYGAAKIAAEAAIRAADIPAAIVRLPSLYDLDAPNPRDIYEIILKASLRAGHMPQALEFPMTDVTAAAA FLLGPITAPDAPIYNLMADARIAPDDPNALPATDWLARVTLDPGIAKVIADFPDTLCASSDFENTAARAAWERVSALPFN EISDSEALLTRRARDYQSDPALT
Specific function: Specifically adenylates threonine and glycine, and loads them onto their corresponding peptidyl carrier domains [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 acyl carrier domain [H]
Homologues:
Organism=Escherichia coli, GI1786801, Length=515, Percent_Identity=28.3495145631068, Blast_Score=111, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010071 - InterPro: IPR009081 - InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR001242 - InterPro: IPR006163 - InterPro: IPR020806 - InterPro: IPR001031 [H]
Pfam domain/function: PF00501 AMP-binding; PF00668 Condensation; PF00550 PP-binding; PF00975 Thioesterase [H]
EC number: 2.7.7.- [C]
Molecular weight: Translated: 96800; Mature: 96669
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: PS50075 ACP_DOMAIN ; PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRDRTVTYGGLGQFATQLGVHLETPQVVGVFGAPGVAMAASAVACVVHGRPFVHLDPA CCCCCCEEEECCHHHHHHHHCCEECCCCEEEEECCCHHHHHHHHHHHEECCCCEEEECCC MPQMVLHNIVSELQVSLIVTCQRADPGQLPRDCATIDANDLLNAAPAPYAPLQAAPVAPD CHHHHHHHHHHHHEEEEEEEEECCCCCCCCCHHCCCCHHHHHCCCCCCCCCCCCCCCCCC DPIYLVATSGTTGRPKCIPVAQDAAYLSYAWRDAFTPYGPDTRVGIYVFAIWEMFRPLRK CCEEEEEECCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH GAGLWFPDASTLFAPGQLADFLIAHDIDEMLFTPSFYDTFLNALDGDKAAALPLSRVILN CCCEECCCCCCEECCHHHHHHHHHHCHHHHHCCCHHHHHHHHHHCCCCHHHCCHHHHEEC GEVVGDDLIIASLAKLPGTALWNLYSICETHDVCMSHLTEPAGDGPASVGVPMEHLRAVI CEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH LDQADAPCPPGTSGQLHFEGPRMLGPGYVNRPEETRLRFREVTLQGRETRLYDTGDQAWV HCCCCCCCCCCCCCEEEECCCCEECCCCCCCCHHHHHHHHHEEECCCCEEEEECCCCCEE DATGALHIEGRIAHMLKLRGFSVQTRELTDTMRDRLAFSSAAPWVAEVGARGQSLIFYFA ECCCEEEECHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEEE ADAAQARRNAEQWGLKAGTNKMPAALAADLRAVLPAYCVPSFLVQMDALPLHPVSGKADL CCHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC RALPAVEEDDHGSDFAEDAVIAAAALAMSCAPSQIDPALSFHDQGGDSLMCVTLMLELEK EECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCEEHHHHHHHHHH TYGLPIDFDLAMNVPLHRLDQLMTQEADAPAPAEDFGRPGILLTGATGFLGGHVLAKAAR HCCCCEEEHHCCCCCHHHHHHHHHHCCCCCCCHHHCCCCCEEEECCCHHHHHHHHHHHHH DLPEGEVVYCLVRDKNRGARDRLDEAAQSHGVAPDRYVIVHGTLDAPRFALEADAYAALS CCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEECCCHHHHHC GSVSRVIHCAAMVNLAIGRQEMLDWSARGMDTVLTFCADARADLRFTSSSAVFPDRGGPW CCHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCC PEAPATPWDGCTGYGAAKIAAEAAIRAADIPAAIVRLPSLYDLDAPNPRDIYEIILKASL CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHH RAGHMPQALEFPMTDVTAAAAFLLGPITAPDAPIYNLMADARIAPDDPNALPATDWLARV CCCCCCCHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHEEE TLDPGIAKVIADFPDTLCASSDFENTAARAAWERVSALPFNEISDSEALLTRRARDYQSD ECCCHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCC PALT CCCC >Mature Secondary Structure SDRDRTVTYGGLGQFATQLGVHLETPQVVGVFGAPGVAMAASAVACVVHGRPFVHLDPA CCCCCEEEECCHHHHHHHHCCEECCCCEEEEECCCHHHHHHHHHHHEECCCCEEEECCC MPQMVLHNIVSELQVSLIVTCQRADPGQLPRDCATIDANDLLNAAPAPYAPLQAAPVAPD CHHHHHHHHHHHHEEEEEEEEECCCCCCCCCHHCCCCHHHHHCCCCCCCCCCCCCCCCCC DPIYLVATSGTTGRPKCIPVAQDAAYLSYAWRDAFTPYGPDTRVGIYVFAIWEMFRPLRK CCEEEEEECCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH GAGLWFPDASTLFAPGQLADFLIAHDIDEMLFTPSFYDTFLNALDGDKAAALPLSRVILN CCCEECCCCCCEECCHHHHHHHHHHCHHHHHCCCHHHHHHHHHHCCCCHHHCCHHHHEEC GEVVGDDLIIASLAKLPGTALWNLYSICETHDVCMSHLTEPAGDGPASVGVPMEHLRAVI CEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH LDQADAPCPPGTSGQLHFEGPRMLGPGYVNRPEETRLRFREVTLQGRETRLYDTGDQAWV HCCCCCCCCCCCCCEEEECCCCEECCCCCCCCHHHHHHHHHEEECCCCEEEEECCCCCEE DATGALHIEGRIAHMLKLRGFSVQTRELTDTMRDRLAFSSAAPWVAEVGARGQSLIFYFA ECCCEEEECHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEEE ADAAQARRNAEQWGLKAGTNKMPAALAADLRAVLPAYCVPSFLVQMDALPLHPVSGKADL CCHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC RALPAVEEDDHGSDFAEDAVIAAAALAMSCAPSQIDPALSFHDQGGDSLMCVTLMLELEK EECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCEEHHHHHHHHHH TYGLPIDFDLAMNVPLHRLDQLMTQEADAPAPAEDFGRPGILLTGATGFLGGHVLAKAAR HCCCCEEEHHCCCCCHHHHHHHHHHCCCCCCCHHHCCCCCEEEECCCHHHHHHHHHHHHH DLPEGEVVYCLVRDKNRGARDRLDEAAQSHGVAPDRYVIVHGTLDAPRFALEADAYAALS CCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEECCCHHHHHC GSVSRVIHCAAMVNLAIGRQEMLDWSARGMDTVLTFCADARADLRFTSSSAVFPDRGGPW CCHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCC PEAPATPWDGCTGYGAAKIAAEAAIRAADIPAAIVRLPSLYDLDAPNPRDIYEIILKASL CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHH RAGHMPQALEFPMTDVTAAAAFLLGPITAPDAPIYNLMADARIAPDDPNALPATDWLARV CCCCCCCHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHEEE TLDPGIAKVIADFPDTLCASSDFENTAARAAWERVSALPFNEISDSEALLTRRARDYQSD ECCCHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCC PALT CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: Phosphopantetheine. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 6 ATP; L-serine; 2,3-dihydroxybenzoate [C]
Specific reaction: 6 ATP + 3 L-serine + 3 2,3-dihydroxybenzoate = 6 pyrophosphate + 6 AMP + enterobactin ATP + L-serine = pyrophosphate + L-Seryl-AMP 6 ATP + 3 L-serine + 3 2,3-dihydroxybenzoate = 6 pyrophosphate + 6 AMP + enterobactin ATP + L-serine = pyrophosphate + L-Ser
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11112781; 9384377; 10568751; 8550523 [H]