Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055104

Identifier: 89055104

GI number: 89055104

Start: 2629568

End: 2630947

Strand: Reverse

Name: 89055104

Synonym: Jann_2613

Alternate gene names: NA

Gene position: 2630947-2629568 (Counterclockwise)

Preceding gene: 89055105

Following gene: 89055103

Centisome position: 60.93

GC content: 61.38

Gene sequence:

>1380_bases
ATGGGCGAACAGATCCCCATGCAGACCCTCAACGCCCTGGTAAGTGCGGTCTGGACGACCGACAAGGATCTGGTCGACCC
CGACAGGCCGGACCCAAATACCGGTCATAAGCGTCAAGGCAATGTGTCCTGGGCCAAGCCCGACCGGCGCAACTCTTCGG
CCGAGCTGCGCCGGATTACCACGGAATCTGACATTGCTGGCAATCATACCGATTTCTACGAGTACTATTGGGCCCATATG
ATGCAGGGCACCACGTGGGAACATGTGACCACCTGGATCCGCGATCTGCTCTTGCGCAATCCGCGCACGCAGGTGCCGCG
GCGCATGTTGCATGCCTGGGTGGTACTTTGGATGGTGGCGTTGATCATCATCGGTGTCTTGATCTGGGGATTGTGGCCCA
GACCGGTGGAGACCCGGCCCTGGGTCGTCGTGGGGGCCGCAGCGTTCGGAATTGCGGTCTCCGCCCTTATCTCCAACGTC
ATGTTGAAGCGGCTTGGCGATGTGGCCCGTTACGTGAAGGCCTGGCCACCCAATGTCGCCAAGCGTCATCTTATCCGGCA
AACGGGCGTCGATCTGCTCGACCGGCTGATCCAATCCGGGAAGTACGACCGGATCGTTGTCGTCGCCCATTCTCTGGGCA
CGATTGTCGCCTACGACATCCTCGCCATGCTCTTTGCCCGGTACAATACGACCCTTGATGACGGCACACCGTCCGAGATG
CACCAGCCCGAGCGCCACCGGCTGGAAGACATGATCCGAGAGGCCAGAGCCACGGGTACTCCGCTTGATCTGGATGCCTA
TCAGGACCAGCAGGCGCTGGCCTTGGCGGAGGCGAAAGGGCAGGGGGCAGAGTGGAACATCAGTGATTTTGTGACCTTCG
GCTCTCCGCTGACCCATGCGGAATTCCTGATGGCCGAAAGCCGAGAAGACCTGCGCACGCGCCAAAGCGCGCGTCTTCTG
CCGACATGCCCTCCCACGCTGGAATATGACAGCAGGACGGAGCTGCACCACTTCACCTATGCCCGCCACCCCGACCGTGT
GCCCATCGACCGCCGCGTGCCCCATCACGCCGCCCTGTTCGCCTACACCCGCTGGACCAATCTATACTCGCAGGAGAAGG
CCTTTCTGACCGGCGATATCGTCTCTGGTCCCGTGGCAGAGGTCTTTGGCTTGTCGACAGATGAAGGCACTGTGACAGGC
ATTCGCGACGTTGCCGTCCTGCCGAAGCTGGACGCCAAAGGCGGCGTCGCGCCTGGCCATCGCCGCTGCTTCGTGTCCCA
CAACAATTACTGGAAAATGCACAAGGGCACCGAGACAGGTCCTGTCGACGTCCCCGATCATATCGCCGAGCTGCGCCGCG
CGTTGCGGATCTTGCAGTAG

Upstream 100 bases:

>100_bases
GAAAGACTTGATGGACGACCAAGGCTTGCTACCATGGGCCAATTGATTTCTCCATTGATTGGAATACCCGTTGAAACAGG
CCGTCGTGATTTTGCATGGC

Downstream 100 bases:

>100_bases
CGGGGCGGGTTTTGCGCCGTCCCGCCCGCATCAGGCGCCGCGCGCGCTTTGATCCGCACACGACCCAGTCCCTTTCGACG
ATGGAATGTCTTGCCATAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 459; Mature: 458

Protein sequence:

>459_residues
MGEQIPMQTLNALVSAVWTTDKDLVDPDRPDPNTGHKRQGNVSWAKPDRRNSSAELRRITTESDIAGNHTDFYEYYWAHM
MQGTTWEHVTTWIRDLLLRNPRTQVPRRMLHAWVVLWMVALIIIGVLIWGLWPRPVETRPWVVVGAAAFGIAVSALISNV
MLKRLGDVARYVKAWPPNVAKRHLIRQTGVDLLDRLIQSGKYDRIVVVAHSLGTIVAYDILAMLFARYNTTLDDGTPSEM
HQPERHRLEDMIREARATGTPLDLDAYQDQQALALAEAKGQGAEWNISDFVTFGSPLTHAEFLMAESREDLRTRQSARLL
PTCPPTLEYDSRTELHHFTYARHPDRVPIDRRVPHHAALFAYTRWTNLYSQEKAFLTGDIVSGPVAEVFGLSTDEGTVTG
IRDVAVLPKLDAKGGVAPGHRRCFVSHNNYWKMHKGTETGPVDVPDHIAELRRALRILQ

Sequences:

>Translated_459_residues
MGEQIPMQTLNALVSAVWTTDKDLVDPDRPDPNTGHKRQGNVSWAKPDRRNSSAELRRITTESDIAGNHTDFYEYYWAHM
MQGTTWEHVTTWIRDLLLRNPRTQVPRRMLHAWVVLWMVALIIIGVLIWGLWPRPVETRPWVVVGAAAFGIAVSALISNV
MLKRLGDVARYVKAWPPNVAKRHLIRQTGVDLLDRLIQSGKYDRIVVVAHSLGTIVAYDILAMLFARYNTTLDDGTPSEM
HQPERHRLEDMIREARATGTPLDLDAYQDQQALALAEAKGQGAEWNISDFVTFGSPLTHAEFLMAESREDLRTRQSARLL
PTCPPTLEYDSRTELHHFTYARHPDRVPIDRRVPHHAALFAYTRWTNLYSQEKAFLTGDIVSGPVAEVFGLSTDEGTVTG
IRDVAVLPKLDAKGGVAPGHRRCFVSHNNYWKMHKGTETGPVDVPDHIAELRRALRILQ
>Mature_458_residues
GEQIPMQTLNALVSAVWTTDKDLVDPDRPDPNTGHKRQGNVSWAKPDRRNSSAELRRITTESDIAGNHTDFYEYYWAHMM
QGTTWEHVTTWIRDLLLRNPRTQVPRRMLHAWVVLWMVALIIIGVLIWGLWPRPVETRPWVVVGAAAFGIAVSALISNVM
LKRLGDVARYVKAWPPNVAKRHLIRQTGVDLLDRLIQSGKYDRIVVVAHSLGTIVAYDILAMLFARYNTTLDDGTPSEMH
QPERHRLEDMIREARATGTPLDLDAYQDQQALALAEAKGQGAEWNISDFVTFGSPLTHAEFLMAESREDLRTRQSARLLP
TCPPTLEYDSRTELHHFTYARHPDRVPIDRRVPHHAALFAYTRWTNLYSQEKAFLTGDIVSGPVAEVFGLSTDEGTVTGI
RDVAVLPKLDAKGGVAPGHRRCFVSHNNYWKMHKGTETGPVDVPDHIAELRRALRILQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52014; Mature: 51883

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEQIPMQTLNALVSAVWTTDKDLVDPDRPDPNTGHKRQGNVSWAKPDRRNSSAELRRIT
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHC
TESDIAGNHTDFYEYYWAHMMQGTTWEHVTTWIRDLLLRNPRTQVPRRMLHAWVVLWMVA
CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LIIIGVLIWGLWPRPVETRPWVVVGAAAFGIAVSALISNVMLKRLGDVARYVKAWPPNVA
HHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
KRHLIRQTGVDLLDRLIQSGKYDRIVVVAHSLGTIVAYDILAMLFARYNTTLDDGTPSEM
HHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
HQPERHRLEDMIREARATGTPLDLDAYQDQQALALAEAKGQGAEWNISDFVTFGSPLTHA
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHH
EFLMAESREDLRTRQSARLLPTCPPTLEYDSRTELHHFTYARHPDRVPIDRRVPHHAALF
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHH
AYTRWTNLYSQEKAFLTGDIVSGPVAEVFGLSTDEGTVTGIRDVAVLPKLDAKGGVAPGH
HHHHHHHHHHHCCCEEECCCCCCCHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC
RRCFVSHNNYWKMHKGTETGPVDVPDHIAELRRALRILQ
CEEEEECCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GEQIPMQTLNALVSAVWTTDKDLVDPDRPDPNTGHKRQGNVSWAKPDRRNSSAELRRIT
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHC
TESDIAGNHTDFYEYYWAHMMQGTTWEHVTTWIRDLLLRNPRTQVPRRMLHAWVVLWMVA
CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LIIIGVLIWGLWPRPVETRPWVVVGAAAFGIAVSALISNVMLKRLGDVARYVKAWPPNVA
HHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
KRHLIRQTGVDLLDRLIQSGKYDRIVVVAHSLGTIVAYDILAMLFARYNTTLDDGTPSEM
HHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
HQPERHRLEDMIREARATGTPLDLDAYQDQQALALAEAKGQGAEWNISDFVTFGSPLTHA
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHH
EFLMAESREDLRTRQSARLLPTCPPTLEYDSRTELHHFTYARHPDRVPIDRRVPHHAALF
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHH
AYTRWTNLYSQEKAFLTGDIVSGPVAEVFGLSTDEGTVTGIRDVAVLPKLDAKGGVAPGH
HHHHHHHHHHHCCCEEECCCCCCCHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC
RRCFVSHNNYWKMHKGTETGPVDVPDHIAELRRALRILQ
CEEEEECCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA