| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is sgaA [H]
Identifier: 89055093
GI number: 89055093
Start: 2617391
End: 2618581
Strand: Direct
Name: sgaA [H]
Synonym: Jann_2602
Alternate gene names: 89055093
Gene position: 2617391-2618581 (Clockwise)
Preceding gene: 89055092
Following gene: 89055094
Centisome position: 60.62
GC content: 61.63
Gene sequence:
>1191_bases ATGAGCTTTCAGAACCCGGTCTTTATTCCCGGCCCTACGAATATGCCCGAGAGGATTCGCACGGCTTGTGATATGCCCAC GATTGATCACCGCTCTCCAACCTTTGGACGCATTCTGCATCCCTGTCTTGAGAACGTGCGCAAGATCCTGAAATCAGACA ACGCCCACATCTTCATCTTCCCCTCCACCGGCACTGGCGGTTGGGAAACGGCGCTGACCAACACGCTGTCACCCGGCGAC AAGGTTCTGGCAGCACGCAATGGCATGTTCAGCCATCGCTGGATCGATATGTGCCAACGCCACCAACTGGATGTGGACAT TGTCGAGACGCCCTGGGGTGCGGGCCTGCCCGCCGAGCGTTACGCGGAAATTCTCGCAGCGGATACGGCCCACGAGATCA AGGTCGTGCTGGCGACGCATAATGAGACGGCCACGGGCGTCAAATCCGACATCGCTGCCGTCCGCCGCGCGCTGGACGAC GCGGGCCACCCCGCCCTGCTGTTCGTGGATGGGGTCAGCTCTATCGCATCCATGGACTTTCGCTTTGACGAATGGGGCGT GGACATCGCCGTGACCGGATCGCAAAAGGGGTTCATGCTGCCAGCCGGTCTGGCGATTGTCGGCTTCTCCGACAAGGCGA AGGCCGCAAGCGAAACCGCGACACTCCCGCGCACCTTCTTCGATATCAAGGACATGGCGGGTGGCTATGCCGCCAACGCC TTCCCCTACACGCCGCCCGTGGGTTTGATGCGGGGATTGAAACTGGCCACGGATCTCCTGCTAGAGGAAGGGTTGGAGAA CGTCTTTGCCCGGCATCACCGCATTGCTGAAGGCGTTCGCCGCGCCGTGGATGCCTGGGGACTGGAGCTGTGCGCGCAGA GCGCCGATGTGCAGTCTGACACCGTCAGCGCGATCAAAACGCCCGAGGGATTCGACGCCACCGATATCGTGACCCGCGCG GCAGAGACCTATGGCGTCGCGTTCGGTGTCGGTCTGGGCGAGGTTGCAGGCAAGGTCTTTCGCATCGGCCATCTGGGCAG CCTCACGGACGTCATGGCGCTGTCAGGCCTCGCCACCGCCGAGATGTGCATGGTGGATCTGGGTCTCGACATCAAACTGG GCTCTGGCGTGGCGGCGGCACAGGAATACTATCGCACAAACCCTGCACAATCGGCACTGCCGGTGGATTGA
Upstream 100 bases:
>100_bases TGACTTTTTGATACCGATGCGTATGACGGGTCCCCTATATGCAAAAATAGGCACCCGCCGTCACCTCCGATATGTTGCCC GAAATCGAGAGGAGACGACG
Downstream 100 bases:
>100_bases AGAGAGGTGTGACCATGAAAGATACCCTAGATCTTCCAACCTACGACGACATGCTCGCCGCGCATGAGCGGATCAAGCCG CATATCAACCGCACGCCGGT
Product: serine-glyoxylate aminotransferase
Products: NA
Alternate protein names: SGAT [H]
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MSFQNPVFIPGPTNMPERIRTACDMPTIDHRSPTFGRILHPCLENVRKILKSDNAHIFIFPSTGTGGWETALTNTLSPGD KVLAARNGMFSHRWIDMCQRHQLDVDIVETPWGAGLPAERYAEILAADTAHEIKVVLATHNETATGVKSDIAAVRRALDD AGHPALLFVDGVSSIASMDFRFDEWGVDIAVTGSQKGFMLPAGLAIVGFSDKAKAASETATLPRTFFDIKDMAGGYAANA FPYTPPVGLMRGLKLATDLLLEEGLENVFARHHRIAEGVRRAVDAWGLELCAQSADVQSDTVSAIKTPEGFDATDIVTRA AETYGVAFGVGLGEVAGKVFRIGHLGSLTDVMALSGLATAEMCMVDLGLDIKLGSGVAAAQEYYRTNPAQSALPVD
Sequences:
>Translated_396_residues MSFQNPVFIPGPTNMPERIRTACDMPTIDHRSPTFGRILHPCLENVRKILKSDNAHIFIFPSTGTGGWETALTNTLSPGD KVLAARNGMFSHRWIDMCQRHQLDVDIVETPWGAGLPAERYAEILAADTAHEIKVVLATHNETATGVKSDIAAVRRALDD AGHPALLFVDGVSSIASMDFRFDEWGVDIAVTGSQKGFMLPAGLAIVGFSDKAKAASETATLPRTFFDIKDMAGGYAANA FPYTPPVGLMRGLKLATDLLLEEGLENVFARHHRIAEGVRRAVDAWGLELCAQSADVQSDTVSAIKTPEGFDATDIVTRA AETYGVAFGVGLGEVAGKVFRIGHLGSLTDVMALSGLATAEMCMVDLGLDIKLGSGVAAAQEYYRTNPAQSALPVD >Mature_395_residues SFQNPVFIPGPTNMPERIRTACDMPTIDHRSPTFGRILHPCLENVRKILKSDNAHIFIFPSTGTGGWETALTNTLSPGDK VLAARNGMFSHRWIDMCQRHQLDVDIVETPWGAGLPAERYAEILAADTAHEIKVVLATHNETATGVKSDIAAVRRALDDA GHPALLFVDGVSSIASMDFRFDEWGVDIAVTGSQKGFMLPAGLAIVGFSDKAKAASETATLPRTFFDIKDMAGGYAANAF PYTPPVGLMRGLKLATDLLLEEGLENVFARHHRIAEGVRRAVDAWGLELCAQSADVQSDTVSAIKTPEGFDATDIVTRAA ETYGVAFGVGLGEVAGKVFRIGHLGSLTDVMALSGLATAEMCMVDLGLDIKLGSGVAAAQEYYRTNPAQSALPVD
Specific function: Unknown
COG id: COG0075
COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI4557289, Length=358, Percent_Identity=30.7262569832402, Blast_Score=157, Evalue=2e-38, Organism=Caenorhabditis elegans, GI17536281, Length=346, Percent_Identity=27.7456647398844, Blast_Score=148, Evalue=4e-36, Organism=Saccharomyces cerevisiae, GI6321079, Length=357, Percent_Identity=30.2521008403361, Blast_Score=149, Evalue=1e-36, Organism=Drosophila melanogaster, GI17530823, Length=381, Percent_Identity=30.1837270341207, Blast_Score=155, Evalue=5e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000192 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00266 Aminotran_5 [H]
EC number: =2.6.1.45 [H]
Molecular weight: Translated: 42386; Mature: 42254
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: PS00595 AA_TRANSFER_CLASS_5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFQNPVFIPGPTNMPERIRTACDMPTIDHRSPTFGRILHPCLENVRKILKSDNAHIFIF CCCCCCEEECCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEE PSTGTGGWETALTNTLSPGDKVLAARNGMFSHRWIDMCQRHQLDVDIVETPWGAGLPAER ECCCCCCHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHH YAEILAADTAHEIKVVLATHNETATGVKSDIAAVRRALDDAGHPALLFVDGVSSIASMDF HHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCC RFDEWGVDIAVTGSQKGFMLPAGLAIVGFSDKAKAASETATLPRTFFDIKDMAGGYAANA EECCCCEEEEEECCCCCEEEECCEEEEECCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCC FPYTPPVGLMRGLKLATDLLLEEGLENVFARHHRIAEGVRRAVDAWGLELCAQSADVQSD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH TVSAIKTPEGFDATDIVTRAAETYGVAFGVGLGEVAGKVFRIGHLGSLTDVMALSGLATA HHHHHCCCCCCCHHHHHHHHHHHHHHHEECCHHHHHHHHEEECCCCHHHHHHHHHCCHHH EMCMVDLGLDIKLGSGVAAAQEYYRTNPAQSALPVD HHHHHHCCCEEEECCCHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SFQNPVFIPGPTNMPERIRTACDMPTIDHRSPTFGRILHPCLENVRKILKSDNAHIFIF CCCCCEEECCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEE PSTGTGGWETALTNTLSPGDKVLAARNGMFSHRWIDMCQRHQLDVDIVETPWGAGLPAER ECCCCCCHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHH YAEILAADTAHEIKVVLATHNETATGVKSDIAAVRRALDDAGHPALLFVDGVSSIASMDF HHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCC RFDEWGVDIAVTGSQKGFMLPAGLAIVGFSDKAKAASETATLPRTFFDIKDMAGGYAANA EECCCCEEEEEECCCCCEEEECCEEEEECCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCC FPYTPPVGLMRGLKLATDLLLEEGLENVFARHHRIAEGVRRAVDAWGLELCAQSADVQSD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH TVSAIKTPEGFDATDIVTRAAETYGVAFGVGLGEVAGKVFRIGHLGSLTDVMALSGLATA HHHHHCCCCCCCHHHHHHHHHHHHHHHEECCHHHHHHHHEEECCCCHHHHHHHHHCCHHH EMCMVDLGLDIKLGSGVAAAQEYYRTNPAQSALPVD HHHHHHCCCEEEECCCHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8898880 [H]