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The map label for this gene is ylbA [H]

Identifier: 89055092

GI number: 89055092

Start: 2616300

End: 2617133

Strand: Direct

Name: ylbA [H]

Synonym: Jann_2601

Alternate gene names: 89055092

Gene position: 2616300-2617133 (Clockwise)

Preceding gene: 89055091

Following gene: 89055093

Centisome position: 60.59

GC content: 61.03

Gene sequence:

>834_bases
ATGACGGCTCGCTATTTCGCCCCCAAGGGGGGCCATCCGCCTCAAGAGCAACTTCTGACTGACCGCGCCGTTTTTACCGA
GGCTTACGCGGTCATCCCCCGGGGCACGATGCAGGACATCGTCACCAGCGCTTTGCCGTTTTGGGACCACACCCGCCTGT
GGGTCTTGTCGCGCCCGCTCAGCGGATTTGCCGAGACATTTTCGCAATACATTATGGAGGTGTCGCCCGGCGGCGGTTCG
GACCGGCCCGAGACGGACCCGAATGCCGAAAGCGTCTTGTTCGTGGTCGACGGGACGTGCGGCATCACCATCGCAGGGGC
CGCCCATACCCTGCGGCCCGGTAGTTACGTCTACCTCCCGCCCGCCACCAACTGGACCTTGCACAACAAAACAGACGCGG
CGGTGCGGTTTCACTGGATCCGCAAGTCCTATGAGGCGGTGGACGGCCTGCCCCTACCCGACCCCCTTGTCACCCACGAG
GATAATGTGACCGCCAACGTCATGCCGGACACGGATGGCAAATGGGCGACAACACGATTTGTGGAATCCGCCGATATGCG
CCACGACATGCATGTCAACATCGTCACCTTCCAGCCCGGCGCCGTGATCCCCTTCGCTGAAACCCATGTGATGGAGCACG
GATTATATGTGCTTGAGGGCAAGGCGGTTTATCGCCTGAATCAAGATTGGGTGGAGGTGGAAGCCGGGGACTACATGTGG
CTGCGCGCGTTTTGCCCGCAGGCTTGCTATGCAGGTGGGCCCGGTCCGTTTCGGTATTTGTTGTATAAGGATGTAAACCG
GCACATGACGCTGCGTGGCGGGAGGGCCATCTAG

Upstream 100 bases:

>100_bases
GATTTATCGGATTTTCCGATAGGTGCTGTCGCTACATTCCGTCTGGTGCAGGCGGATTGAGACGCCCTATCCTACAACGA
TGTTAATCAAGGACGGTGTC

Downstream 100 bases:

>100_bases
ACACGGCGACCTCACTGGCCGCCCGGTGCCAATTTGACGGCGACGGACGTGCATTGATTTCGTCTCTGACGTAGAATCAA
CACCGTATCTCGACATCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MTARYFAPKGGHPPQEQLLTDRAVFTEAYAVIPRGTMQDIVTSALPFWDHTRLWVLSRPLSGFAETFSQYIMEVSPGGGS
DRPETDPNAESVLFVVDGTCGITIAGAAHTLRPGSYVYLPPATNWTLHNKTDAAVRFHWIRKSYEAVDGLPLPDPLVTHE
DNVTANVMPDTDGKWATTRFVESADMRHDMHVNIVTFQPGAVIPFAETHVMEHGLYVLEGKAVYRLNQDWVEVEAGDYMW
LRAFCPQACYAGGPGPFRYLLYKDVNRHMTLRGGRAI

Sequences:

>Translated_277_residues
MTARYFAPKGGHPPQEQLLTDRAVFTEAYAVIPRGTMQDIVTSALPFWDHTRLWVLSRPLSGFAETFSQYIMEVSPGGGS
DRPETDPNAESVLFVVDGTCGITIAGAAHTLRPGSYVYLPPATNWTLHNKTDAAVRFHWIRKSYEAVDGLPLPDPLVTHE
DNVTANVMPDTDGKWATTRFVESADMRHDMHVNIVTFQPGAVIPFAETHVMEHGLYVLEGKAVYRLNQDWVEVEAGDYMW
LRAFCPQACYAGGPGPFRYLLYKDVNRHMTLRGGRAI
>Mature_276_residues
TARYFAPKGGHPPQEQLLTDRAVFTEAYAVIPRGTMQDIVTSALPFWDHTRLWVLSRPLSGFAETFSQYIMEVSPGGGSD
RPETDPNAESVLFVVDGTCGITIAGAAHTLRPGSYVYLPPATNWTLHNKTDAAVRFHWIRKSYEAVDGLPLPDPLVTHED
NVTANVMPDTDGKWATTRFVESADMRHDMHVNIVTFQPGAVIPFAETHVMEHGLYVLEGKAVYRLNQDWVEVEAGDYMWL
RAFCPQACYAGGPGPFRYLLYKDVNRHMTLRGGRAI

Specific function: Unknown

COG id: COG3257

COG function: function code R; Uncharacterized protein, possibly involved in glyoxylate utilization

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786725, Length=262, Percent_Identity=28.6259541984733, Blast_Score=105, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017627
- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR008579
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2; PF05899 Cupin_3 [H]

EC number: NA

Molecular weight: Translated: 30941; Mature: 30810

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARYFAPKGGHPPQEQLLTDRAVFTEAYAVIPRGTMQDIVTSALPFWDHTRLWVLSRPL
CCCEEECCCCCCCCHHHHHHHHHHHHHHHEECCCCHHHHHHHHHCCCCCCCEEEEEECCH
SGFAETFSQYIMEVSPGGGSDRPETDPNAESVLFVVDGTCGITIAGAAHTLRPGSYVYLP
HHHHHHHHHHHEEECCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCEEECCCCEEEEC
PATNWTLHNKTDAAVRFHWIRKSYEAVDGLPLPDPLVTHEDNVTANVMPDTDGKWATTRF
CCCCEEEECCCCCEEEEEEHHHHHHHHCCCCCCCCCEECCCCCEEEEECCCCCCEEHHHH
VESADMRHDMHVNIVTFQPGAVIPFAETHVMEHGLYVLEGKAVYRLNQDWVEVEAGDYMW
HHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCEEEEECCEEEEECCCEEEEECCCEEE
LRAFCPQACYAGGPGPFRYLLYKDVNRHMTLRGGRAI
EEHHCCHHHHCCCCCCEEEEEEECCCCEEEECCCCCC
>Mature Secondary Structure 
TARYFAPKGGHPPQEQLLTDRAVFTEAYAVIPRGTMQDIVTSALPFWDHTRLWVLSRPL
CCEEECCCCCCCCHHHHHHHHHHHHHHHEECCCCHHHHHHHHHCCCCCCCEEEEEECCH
SGFAETFSQYIMEVSPGGGSDRPETDPNAESVLFVVDGTCGITIAGAAHTLRPGSYVYLP
HHHHHHHHHHHEEECCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCEEECCCCEEEEC
PATNWTLHNKTDAAVRFHWIRKSYEAVDGLPLPDPLVTHEDNVTANVMPDTDGKWATTRF
CCCCEEEECCCCCEEEEEEHHHHHHHHCCCCCCCCCEECCCCCEEEEECCCCCCEEHHHH
VESADMRHDMHVNIVTFQPGAVIPFAETHVMEHGLYVLEGKAVYRLNQDWVEVEAGDYMW
HHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCEEEEECCEEEEECCCEEEEECCCEEE
LRAFCPQACYAGGPGPFRYLLYKDVNRHMTLRGGRAI
EEHHCCHHHHCCCCCCEEEEEEECCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10601204; 9278503 [H]