Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055047

Identifier: 89055047

GI number: 89055047

Start: 2556864

End: 2557067

Strand: Reverse

Name: 89055047

Synonym: Jann_2556

Alternate gene names: NA

Gene position: 2557067-2556864 (Counterclockwise)

Preceding gene: 89055048

Following gene: 89055045

Centisome position: 59.22

GC content: 62.75

Gene sequence:

>204_bases
ATGCCGCATGACAAACTGACCCGTATGGCCAACCAGATCGCCAGCTTCTTCGCCACCCAACCCGGGAGCGATCAGGCCGA
GCGTGTGGCGGCCCATCTGAATGACTTCTGGGGCCCAGAGATGCGCGATGCGCTCAAAGCCTGTGCCGCCCGGGACGATA
GTGATCTGGCCCCGCTGGTGCGTGACGCCATCCCTCTGATTTAG

Upstream 100 bases:

>100_bases
CGCGTGGCCGATGCCGCCAACCTGACAATCGCCGCCTTCGCCAGATCGGGGCGGCTTGAGACATTCACCCATCCGCAACG
GATCGACCGGAGCCAATCTG

Downstream 100 bases:

>100_bases
GCGGCGAGGACAGGCCGGAGGCCTGGAGGAGCGGGGACGCTACAGGCGCGCCAGCGCCGTCTCCAGATCGCCATACCCCG
TAAACCGCCGCTCAAACGCC

Product: formate dehydrogenase subunit delta

Products: NA

Alternate protein names: Formate Dehydrogenase Protein Delta Subunit

Number of amino acids: Translated: 67; Mature: 66

Protein sequence:

>67_residues
MPHDKLTRMANQIASFFATQPGSDQAERVAAHLNDFWGPEMRDALKACAARDDSDLAPLVRDAIPLI

Sequences:

>Translated_67_residues
MPHDKLTRMANQIASFFATQPGSDQAERVAAHLNDFWGPEMRDALKACAARDDSDLAPLVRDAIPLI
>Mature_66_residues
PHDKLTRMANQIASFFATQPGSDQAERVAAHLNDFWGPEMRDALKACAARDDSDLAPLVRDAIPLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7378; Mature: 7247

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHDKLTRMANQIASFFATQPGSDQAERVAAHLNDFWGPEMRDALKACAARDDSDLAPLV
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHH
RDAIPLI
HHHHCCC
>Mature Secondary Structure 
PHDKLTRMANQIASFFATQPGSDQAERVAAHLNDFWGPEMRDALKACAARDDSDLAPLV
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHH
RDAIPLI
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA