| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055047
Identifier: 89055047
GI number: 89055047
Start: 2556864
End: 2557067
Strand: Reverse
Name: 89055047
Synonym: Jann_2556
Alternate gene names: NA
Gene position: 2557067-2556864 (Counterclockwise)
Preceding gene: 89055048
Following gene: 89055045
Centisome position: 59.22
GC content: 62.75
Gene sequence:
>204_bases ATGCCGCATGACAAACTGACCCGTATGGCCAACCAGATCGCCAGCTTCTTCGCCACCCAACCCGGGAGCGATCAGGCCGA GCGTGTGGCGGCCCATCTGAATGACTTCTGGGGCCCAGAGATGCGCGATGCGCTCAAAGCCTGTGCCGCCCGGGACGATA GTGATCTGGCCCCGCTGGTGCGTGACGCCATCCCTCTGATTTAG
Upstream 100 bases:
>100_bases CGCGTGGCCGATGCCGCCAACCTGACAATCGCCGCCTTCGCCAGATCGGGGCGGCTTGAGACATTCACCCATCCGCAACG GATCGACCGGAGCCAATCTG
Downstream 100 bases:
>100_bases GCGGCGAGGACAGGCCGGAGGCCTGGAGGAGCGGGGACGCTACAGGCGCGCCAGCGCCGTCTCCAGATCGCCATACCCCG TAAACCGCCGCTCAAACGCC
Product: formate dehydrogenase subunit delta
Products: NA
Alternate protein names: Formate Dehydrogenase Protein Delta Subunit
Number of amino acids: Translated: 67; Mature: 66
Protein sequence:
>67_residues MPHDKLTRMANQIASFFATQPGSDQAERVAAHLNDFWGPEMRDALKACAARDDSDLAPLVRDAIPLI
Sequences:
>Translated_67_residues MPHDKLTRMANQIASFFATQPGSDQAERVAAHLNDFWGPEMRDALKACAARDDSDLAPLVRDAIPLI >Mature_66_residues PHDKLTRMANQIASFFATQPGSDQAERVAAHLNDFWGPEMRDALKACAARDDSDLAPLVRDAIPLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7378; Mature: 7247
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHDKLTRMANQIASFFATQPGSDQAERVAAHLNDFWGPEMRDALKACAARDDSDLAPLV CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHH RDAIPLI HHHHCCC >Mature Secondary Structure PHDKLTRMANQIASFFATQPGSDQAERVAAHLNDFWGPEMRDALKACAARDDSDLAPLV CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHH RDAIPLI HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA