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The map label for this gene is fdhD [H]

Identifier: 89055048

GI number: 89055048

Start: 2557057

End: 2557866

Strand: Reverse

Name: fdhD [H]

Synonym: Jann_2557

Alternate gene names: 89055048

Gene position: 2557866-2557057 (Counterclockwise)

Preceding gene: 89055049

Following gene: 89055047

Centisome position: 59.24

GC content: 68.15

Gene sequence:

>810_bases
GTGAAAGCGACCCGGTCCATAGCGGCGCAAGCCGTGGGGCCGGAGGGCGCGCGCGACATTGCCCGCGCCTTGCCGGAGGA
GGTGCCCGTGGCCGTGACGGTCAACGGCACGTCGCAGGCGGTGATGATGTGCTCGCCTGCGGATCTGGAGGATTTTGCCC
TGGGGTTCGCCTATACCGAAGGCTTCGCGACCCCGGAGCAGATCGACCGGCTGGAGATCGTGGAACTGGATGCGGGCATC
GAGGCGCGGCTGTGGGTCGATGATGCCGTGGCCGATGCCCTGGGCGCACGGCGTCGCGCGATGATGGGGCCGGTGGGCTG
CGGGCTCTGCGGGATCGACTCGCTGGAGCAGGCTTTGCGCGATCTGCCTGTATTGACGGGCGAGGGTCGCATCGGTGCAG
CCGAGGCGGCGCAAGGCCCCGATATGCTGCGCGATCACCAACCCCTCCATGACCGGACCCAGGCGGTCCATGCGGCGGGG
TTTCTGGTGCCGGGACAGGGGATCATCGCCGCCCGAGAAGACGTGGGGCGGCACAATGCCCTGGACAAACTGATCGGCGC
GCTTCTGCGGGACGGCGTGGATCCCAAACGCGGCGCGGTCGTGCTGACCTCTCGCGTATCACTGGAGATGGTCCAGAAGA
CGGTGCTGTTGGGCTGCCCGATCCTCATCGCCGTCTCGGCCCCGACGGCCCACGCCGTCCGCGTGGCCGATGCCGCCAAC
CTGACAATCGCCGCCTTCGCCAGATCGGGGCGGCTTGAGACATTCACCCATCCGCAACGGATCGACCGGAGCCAATCTGA
TGCCGCATGA

Upstream 100 bases:

>100_bases
ACGGCCCGACAGAATGGCAGCGCGCGTATAACGCGCAGGCCGAAAAGTCGCGGCGCATCCAATCAAGTGACGGCGTGCGT
GGGCGCGCGACGGCGGCGGA

Downstream 100 bases:

>100_bases
CAAACTGACCCGTATGGCCAACCAGATCGCCAGCTTCTTCGCCACCCAACCCGGGAGCGATCAGGCCGAGCGTGTGGCGG
CCCATCTGAATGACTTCTGG

Product: formate dehydrogenase accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MKATRSIAAQAVGPEGARDIARALPEEVPVAVTVNGTSQAVMMCSPADLEDFALGFAYTEGFATPEQIDRLEIVELDAGI
EARLWVDDAVADALGARRRAMMGPVGCGLCGIDSLEQALRDLPVLTGEGRIGAAEAAQGPDMLRDHQPLHDRTQAVHAAG
FLVPGQGIIAAREDVGRHNALDKLIGALLRDGVDPKRGAVVLTSRVSLEMVQKTVLLGCPILIAVSAPTAHAVRVADAAN
LTIAAFARSGRLETFTHPQRIDRSQSDAA

Sequences:

>Translated_269_residues
MKATRSIAAQAVGPEGARDIARALPEEVPVAVTVNGTSQAVMMCSPADLEDFALGFAYTEGFATPEQIDRLEIVELDAGI
EARLWVDDAVADALGARRRAMMGPVGCGLCGIDSLEQALRDLPVLTGEGRIGAAEAAQGPDMLRDHQPLHDRTQAVHAAG
FLVPGQGIIAAREDVGRHNALDKLIGALLRDGVDPKRGAVVLTSRVSLEMVQKTVLLGCPILIAVSAPTAHAVRVADAAN
LTIAAFARSGRLETFTHPQRIDRSQSDAA
>Mature_269_residues
MKATRSIAAQAVGPEGARDIARALPEEVPVAVTVNGTSQAVMMCSPADLEDFALGFAYTEGFATPEQIDRLEIVELDAGI
EARLWVDDAVADALGARRRAMMGPVGCGLCGIDSLEQALRDLPVLTGEGRIGAAEAAQGPDMLRDHQPLHDRTQAVHAAG
FLVPGQGIIAAREDVGRHNALDKLIGALLRDGVDPKRGAVVLTSRVSLEMVQKTVLLGCPILIAVSAPTAHAVRVADAAN
LTIAAFARSGRLETFTHPQRIDRSQSDAA

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=237, Percent_Identity=41.3502109704641, Blast_Score=177, Evalue=6e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 28263; Mature: 28263

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKATRSIAAQAVGPEGARDIARALPEEVPVAVTVNGTSQAVMMCSPADLEDFALGFAYTE
CCCHHHHHHHHCCCCCHHHHHHHCHHHCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHC
GFATPEQIDRLEIVELDAGIEARLWVDDAVADALGARRRAMMGPVGCGLCGIDSLEQALR
CCCCHHHCCCEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
DLPVLTGEGRIGAAEAAQGPDMLRDHQPLHDRTQAVHAAGFLVPGQGIIAAREDVGRHNA
HCCEEECCCCCCCHHCCCCCHHHHCCCCHHHHHHHHHHHCEEECCCCEEEEHHHHHHHHH
LDKLIGALLRDGVDPKRGAVVLTSRVSLEMVQKTVLLGCPILIAVSAPTAHAVRVADAAN
HHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCC
LTIAAFARSGRLETFTHPQRIDRSQSDAA
EEEEEECCCCCCCCCCCHHHHCCCCCCCC
>Mature Secondary Structure
MKATRSIAAQAVGPEGARDIARALPEEVPVAVTVNGTSQAVMMCSPADLEDFALGFAYTE
CCCHHHHHHHHCCCCCHHHHHHHCHHHCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHC
GFATPEQIDRLEIVELDAGIEARLWVDDAVADALGARRRAMMGPVGCGLCGIDSLEQALR
CCCCHHHCCCEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
DLPVLTGEGRIGAAEAAQGPDMLRDHQPLHDRTQAVHAAGFLVPGQGIIAAREDVGRHNA
HCCEEECCCCCCCHHCCCCCHHHHCCCCHHHHHHHHHHHCEEECCCCEEEEHHHHHHHHH
LDKLIGALLRDGVDPKRGAVVLTSRVSLEMVQKTVLLGCPILIAVSAPTAHAVRVADAAN
HHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCC
LTIAAFARSGRLETFTHPQRIDRSQSDAA
EEEEEECCCCCCCCCCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA