Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055044

Identifier: 89055044

GI number: 89055044

Start: 2555268

End: 2555513

Strand: Direct

Name: 89055044

Synonym: Jann_2553

Alternate gene names: NA

Gene position: 2555268-2555513 (Clockwise)

Preceding gene: 89055043

Following gene: 89055046

Centisome position: 59.18

GC content: 61.38

Gene sequence:

>246_bases
ATGACGCACGCCGCCCCACATCGCCTTGCAAGCAAACGAAAAAGGAGCGGTCCGGTGATCTCTATCCAAGCGAAAATCAT
TCTGGGCGCGGTGGCGTTTGCCATTGTCGCCTCGGCCCTGACGATCTGGCTGATCCTGGCGTGGGGGAACGGCGCATTTG
CCGTGTTCGTGCCCCTGGCCCTGTCCGGCGCGCTGGCCTTGGTTGTCTACTCGGTTGTCTTCCGCAAAAAAGACGGGCCG
TCCTGA

Upstream 100 bases:

>100_bases
CGTGGGTGAGGCCGTATCCGGCGCGGTCATCCTGACGGGCATTGCCCTGGCGGTCCTTGGGCCCAGAGTGTTCAGGGTGC
GCTGAATTGGCCCCTTGGCG

Downstream 100 bases:

>100_bases
GGGGACGACCCGCTTGGGCATAAAGCTGTTGGTCTTGGTTTACGCTGTGCGCAGCCGATCCAGATACTGGACCGTCGCGG
CGGCGGCGATGGCGTAGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 80

Protein sequence:

>81_residues
MTHAAPHRLASKRKRSGPVISIQAKIILGAVAFAIVASALTIWLILAWGNGAFAVFVPLALSGALALVVYSVVFRKKDGP
S

Sequences:

>Translated_81_residues
MTHAAPHRLASKRKRSGPVISIQAKIILGAVAFAIVASALTIWLILAWGNGAFAVFVPLALSGALALVVYSVVFRKKDGP
S
>Mature_80_residues
THAAPHRLASKRKRSGPVISIQAKIILGAVAFAIVASALTIWLILAWGNGAFAVFVPLALSGALALVVYSVVFRKKDGPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8482; Mature: 8351

Theoretical pI: Translated: 12.15; Mature: 12.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHAAPHRLASKRKRSGPVISIQAKIILGAVAFAIVASALTIWLILAWGNGAFAVFVPLA
CCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LSGALALVVYSVVFRKKDGPS
HHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
THAAPHRLASKRKRSGPVISIQAKIILGAVAFAIVASALTIWLILAWGNGAFAVFVPLA
CCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LSGALALVVYSVVFRKKDGPS
HHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA