| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is eamA [H]
Identifier: 89055043
GI number: 89055043
Start: 2554371
End: 2555252
Strand: Direct
Name: eamA [H]
Synonym: Jann_2552
Alternate gene names: 89055043
Gene position: 2554371-2555252 (Clockwise)
Preceding gene: 89055042
Following gene: 89055044
Centisome position: 59.16
GC content: 65.99
Gene sequence:
>882_bases ATGTCTGACACCCGCTCCCTGCTGCCGCCCCGCGATCTGGCTTTGGTGGCCTGCGTCATCCTCGCCTGGGGGTCGAACTT CACCGGTATGAAACTGGTGTTGGAGGAGCTTCCGCCGTTCCTGTTCGTGGGCCTGCGCTTCGCGATCCTGATCCCGCTGA TCGTTCTGTTCCCCCGTCCGGCCTCCTGGCGGGCGATCATCGCGATCGGGCTTCTGGTCAATATGGGTCAGTTCGGGTTC CTGTTCTCCGCCATGCGGGCGGATGTGACGGCGGGACTGGCATCGCTGATCCTGCAAAGCCAAGCGCCACTGACCATTAT CCTCGCAGCCATCTTCTTCGGCGAACGGGTCAGCTGGCCGCAGGTGGCAGGAATTGCGCTCGCGTGCCTGGGTCTTGCGG GCTTTGCCGTTGCGGGCGGCGGGAACATCACGCTGGTCGGGCTCGGGCTGGTCCTGTGCGGGGCGCTGTCCTGGGCCTGC GGCAACCTCGTCTTCCGCCGGTTGCCGGGCGTGAACATGGCCGCCCTGTTCATCTGGTCGAGCCTGATCCCGCCCCTGCC GATGCTGGCCCTGTCGCTGGCCTTTGAAGGCCCCGCCCCCTTTGCAACCATCGCCGCCATGGGGCTGAGCGGTTGGGCGG GCGTCTTCTATGTGGCGATCATCTCAACCATCATCGGCTATTCGATCTGGGGCGCGCTCTTGTCCCGTCACCCCGCCGCC CTTGTGACGCCGTTTGCGCTTGGAATACCCATTGTGGGCCTGGCCACGGCCTGGGCTGTCCTGGGCGAAACCGTGGGCGT GGGTGAGGCCGTATCCGGCGCGGTCATCCTGACGGGCATTGCCCTGGCGGTCCTTGGGCCCAGAGTGTTCAGGGTGCGCT GA
Upstream 100 bases:
>100_bases ACACCAGCCTTGGATGGACGCGCACCGGAACGCGCCTCGCCATGTTCTCGGACACGCTTTAGCGGTTGCACCCGCAGGGA CCTCGGGGCCTAGTGCGCTC
Downstream 100 bases:
>100_bases ATTGGCCCCTTGGCGATGACGCACGCCGCCCCACATCGCCTTGCAAGCAAACGAAAAAGGAGCGGTCCGGTGATCTCTAT CCAAGCGAAAATCATTCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MSDTRSLLPPRDLALVACVILAWGSNFTGMKLVLEELPPFLFVGLRFAILIPLIVLFPRPASWRAIIAIGLLVNMGQFGF LFSAMRADVTAGLASLILQSQAPLTIILAAIFFGERVSWPQVAGIALACLGLAGFAVAGGGNITLVGLGLVLCGALSWAC GNLVFRRLPGVNMAALFIWSSLIPPLPMLALSLAFEGPAPFATIAAMGLSGWAGVFYVAIISTIIGYSIWGALLSRHPAA LVTPFALGIPIVGLATAWAVLGETVGVGEAVSGAVILTGIALAVLGPRVFRVR
Sequences:
>Translated_293_residues MSDTRSLLPPRDLALVACVILAWGSNFTGMKLVLEELPPFLFVGLRFAILIPLIVLFPRPASWRAIIAIGLLVNMGQFGF LFSAMRADVTAGLASLILQSQAPLTIILAAIFFGERVSWPQVAGIALACLGLAGFAVAGGGNITLVGLGLVLCGALSWAC GNLVFRRLPGVNMAALFIWSSLIPPLPMLALSLAFEGPAPFATIAAMGLSGWAGVFYVAIISTIIGYSIWGALLSRHPAA LVTPFALGIPIVGLATAWAVLGETVGVGEAVSGAVILTGIALAVLGPRVFRVR >Mature_292_residues SDTRSLLPPRDLALVACVILAWGSNFTGMKLVLEELPPFLFVGLRFAILIPLIVLFPRPASWRAIIAIGLLVNMGQFGFL FSAMRADVTAGLASLILQSQAPLTIILAAIFFGERVSWPQVAGIALACLGLAGFAVAGGGNITLVGLGLVLCGALSWACG NLVFRRLPGVNMAALFIWSSLIPPLPMLALSLAFEGPAPFATIAAMGLSGWAGVFYVAIISTIIGYSIWGALLSRHPAAL VTPFALGIPIVGLATAWAVLGETVGVGEAVSGAVILTGIALAVLGPRVFRVR
Specific function: May be an export pump for cysteine and other metabolites of the cysteine pathway (such as N-acetyl-L-serine (NAS) and O- acetyl-L-serine (OAS)), and for other amino acids and their metabolites [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
Organism=Escherichia coli, GI87081929, Length=275, Percent_Identity=37.0909090909091, Blast_Score=161, Evalue=5e-41, Organism=Escherichia coli, GI87082351, Length=285, Percent_Identity=29.8245614035088, Blast_Score=66, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 30415; Mature: 30284
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTRSLLPPRDLALVACVILAWGSNFTGMKLVLEELPPFLFVGLRFAILIPLIVLFPRP CCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC ASWRAIIAIGLLVNMGQFGFLFSAMRADVTAGLASLILQSQAPLTIILAAIFFGERVSWP CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCH QVAGIALACLGLAGFAVAGGGNITLVGLGLVLCGALSWACGNLVFRRLPGVNMAALFIWS HHHHHHHHHHHHHHHHEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH SLIPPLPMLALSLAFEGPAPFATIAAMGLSGWAGVFYVAIISTIIGYSIWGALLSRHPAA HHCCCHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH LVTPFALGIPIVGLATAWAVLGETVGVGEAVSGAVILTGIALAVLGPRVFRVR HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHCCHHEECC >Mature Secondary Structure SDTRSLLPPRDLALVACVILAWGSNFTGMKLVLEELPPFLFVGLRFAILIPLIVLFPRP CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC ASWRAIIAIGLLVNMGQFGFLFSAMRADVTAGLASLILQSQAPLTIILAAIFFGERVSWP CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCH QVAGIALACLGLAGFAVAGGGNITLVGLGLVLCGALSWACGNLVFRRLPGVNMAALFIWS HHHHHHHHHHHHHHHHEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH SLIPPLPMLALSLAFEGPAPFATIAAMGLSGWAGVFYVAIISTIIGYSIWGALLSRHPAA HHCCCHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH LVTPFALGIPIVGLATAWAVLGETVGVGEAVSGAVILTGIALAVLGPRVFRVR HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHCCHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8383113; 9097039; 9278503; 10844694 [H]