Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055031

Identifier: 89055031

GI number: 89055031

Start: 2543750

End: 2544625

Strand: Reverse

Name: 89055031

Synonym: Jann_2540

Alternate gene names: NA

Gene position: 2544625-2543750 (Counterclockwise)

Preceding gene: 89055032

Following gene: 89055030

Centisome position: 58.93

GC content: 66.21

Gene sequence:

>876_bases
ATGGGGGACGCCTATGCCGTCGCGATGCTGGTCCTATATGGCGGCTACACGCTGATCCTTGTCGTGGTGGCGGGGCTGGG
CCTTTGGCTTCTGCGCTACCGGATGATGAGATGGGCCGGGATCGCGATCCTCGCGGGGCTCGTGGCGTGGTGCTTAATCC
CGCCCACGCTCGACCGGATCGCGGCTGCGCAGGAGCGGCGTGAGATCGCGGCGGCCACGGCACTGCCCGAGGCCCTGTCG
TTCGAGGGCCAGAGCGTGCTGATCATCGAGGCGGGCAACACGATCTGCTCCGATTTCTGCGGCGACATCGTGCAATTGGG
CGTTCCCGGCGACTTCTACTGGTTGGGCATGGGCAGCTATACCGGCGGGGACACTGTGCCCAATCCCGATTTCGCGATTC
TCGACGCCACGGACAGGATCCTGCGGGTGCAGTTGGGTGCGCCGATTGAGGATATGGGTGGGATGCGGTTTGCCGAGCCC
GTGGAGGGCGCGGCGATTCCGGACTTCGACATCGTGATCATCGACGACAACGGCTACCTGCGCAGCTACGCGCCGCAGCT
TCTGGGCCTGCCCGACGCGCTGGTGCCCCGCACGCAGGTGGCGCGCGTTCTGATTGAGGGCTGGCATGATCCCATGTCAG
ATCCGCCGCCCGCAGCGACCTACCGCAGCGTGGCGCCGTGGCAGGACGTTGGCGCGTTCATTTACTGGCCCCTGTCACGC
AATGACGCCGCGTCGCCGTCCATCCAGCAGATGACCGAGGCGTGGACCGCCCTGATCTGCCCCAATGCCGGACCGCCCGA
GGCGCGCGATGCGTTCACCTATGCCTACCTCTGCGATCAGTCCCGCCTGGACGAGGTTCTAGGCGGCGACGGATAA

Upstream 100 bases:

>100_bases
ATCTGTGAAGGGCCGTGGTTGCAAGGTTGCAACCGGGGGTTAAGCCGCTGAAATACAATCCATATCCTGATCTCTTTAAC
CTTTTGCGGGGCGTTTCGTG

Downstream 100 bases:

>100_bases
ACGTTCAGGCCGCGCCGTTTCCCCATTGTCTTTTTGTTCCCCCCGCCTTTAATGTAAGACAACTGGCCTTTTGGTCAGGT
CAAAGGTTCTCTGCCTCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MGDAYAVAMLVLYGGYTLILVVVAGLGLWLLRYRMMRWAGIAILAGLVAWCLIPPTLDRIAAAQERREIAAATALPEALS
FEGQSVLIIEAGNTICSDFCGDIVQLGVPGDFYWLGMGSYTGGDTVPNPDFAILDATDRILRVQLGAPIEDMGGMRFAEP
VEGAAIPDFDIVIIDDNGYLRSYAPQLLGLPDALVPRTQVARVLIEGWHDPMSDPPPAATYRSVAPWQDVGAFIYWPLSR
NDAASPSIQQMTEAWTALICPNAGPPEARDAFTYAYLCDQSRLDEVLGGDG

Sequences:

>Translated_291_residues
MGDAYAVAMLVLYGGYTLILVVVAGLGLWLLRYRMMRWAGIAILAGLVAWCLIPPTLDRIAAAQERREIAAATALPEALS
FEGQSVLIIEAGNTICSDFCGDIVQLGVPGDFYWLGMGSYTGGDTVPNPDFAILDATDRILRVQLGAPIEDMGGMRFAEP
VEGAAIPDFDIVIIDDNGYLRSYAPQLLGLPDALVPRTQVARVLIEGWHDPMSDPPPAATYRSVAPWQDVGAFIYWPLSR
NDAASPSIQQMTEAWTALICPNAGPPEARDAFTYAYLCDQSRLDEVLGGDG
>Mature_290_residues
GDAYAVAMLVLYGGYTLILVVVAGLGLWLLRYRMMRWAGIAILAGLVAWCLIPPTLDRIAAAQERREIAAATALPEALSF
EGQSVLIIEAGNTICSDFCGDIVQLGVPGDFYWLGMGSYTGGDTVPNPDFAILDATDRILRVQLGAPIEDMGGMRFAEPV
EGAAIPDFDIVIIDDNGYLRSYAPQLLGLPDALVPRTQVARVLIEGWHDPMSDPPPAATYRSVAPWQDVGAFIYWPLSRN
DAASPSIQQMTEAWTALICPNAGPPEARDAFTYAYLCDQSRLDEVLGGDG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31398; Mature: 31267

Theoretical pI: Translated: 3.96; Mature: 3.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDAYAVAMLVLYGGYTLILVVVAGLGLWLLRYRMMRWAGIAILAGLVAWCLIPPTLDRI
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
AAAQERREIAAATALPEALSFEGQSVLIIEAGNTICSDFCGDIVQLGVPGDFYWLGMGSY
HHHHHHHHHHHHHHCCHHHCCCCCEEEEEECCCHHHHHHHHHHEECCCCCCEEEEECCCC
TGGDTVPNPDFAILDATDRILRVQLGAPIEDMGGMRFAEPVEGAAIPDFDIVIIDDNGYL
CCCCCCCCCCEEEEECCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCH
RSYAPQLLGLPDALVPRTQVARVLIEGWHDPMSDPPPAATYRSVAPWQDVGAFIYWPLSR
HHHHHHHHCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCEEEEEECCC
NDAASPSIQQMTEAWTALICPNAGPPEARDAFTYAYLCDQSRLDEVLGGDG
CCCCCCHHHHHHHHHHEEECCCCCCCCHHHHEEHHHHHCHHHHHHHHCCCC
>Mature Secondary Structure 
GDAYAVAMLVLYGGYTLILVVVAGLGLWLLRYRMMRWAGIAILAGLVAWCLIPPTLDRI
CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
AAAQERREIAAATALPEALSFEGQSVLIIEAGNTICSDFCGDIVQLGVPGDFYWLGMGSY
HHHHHHHHHHHHHHCCHHHCCCCCEEEEEECCCHHHHHHHHHHEECCCCCCEEEEECCCC
TGGDTVPNPDFAILDATDRILRVQLGAPIEDMGGMRFAEPVEGAAIPDFDIVIIDDNGYL
CCCCCCCCCCEEEEECCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCH
RSYAPQLLGLPDALVPRTQVARVLIEGWHDPMSDPPPAATYRSVAPWQDVGAFIYWPLSR
HHHHHHHHCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCEEEEEECCC
NDAASPSIQQMTEAWTALICPNAGPPEARDAFTYAYLCDQSRLDEVLGGDG
CCCCCCHHHHHHHHHHEEECCCCCCCCHHHHEEHHHHHCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA