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The map label for this gene is 89055012

Identifier: 89055012

GI number: 89055012

Start: 2521597

End: 2522409

Strand: Direct

Name: 89055012

Synonym: Jann_2521

Alternate gene names: NA

Gene position: 2521597-2522409 (Clockwise)

Preceding gene: 89055003

Following gene: 89055014

Centisome position: 58.4

GC content: 66.42

Gene sequence:

>813_bases
ATGTGGGATGACCTGGCGCTTTTCTCGGCCGTGGCCCGGCACGGCAGCCTCACCGCGGCCGCCACCCAGACGGACAGCAG
CGCGGCGACCCTCAGCCGCCGCATGAAGGCGCTAGAGGCTGCAATGGACCGCCCGCTCTTCCTGCATGGACGCGACGGCT
ATGCCCTGACCGCCGAGGGACGGGAGTTGTTGCAGCGCACCGAGCGGATGGAGGCCGCCGCCGCCGATATCGAATCCTGG
CGCAATCAGGGACCGGGCAAGCGCCGCGTCCGGATCTCTGCCGGATCTTGGACGTCGGACCTTCTGGCGCGGCATCTGGC
TGACTTCTGGCAACCCGACTTCAATTGGGTGCCCGAGTTTCTGCATTGTGAGCGCGATATGGACATCGCCCGGCGGCAAA
TCGACATCGGCGTTCGCAATCACAAACCCGATCAGCCCTGGCTGGCGGGGCGACGCACCGGAGAGGTCAACTTCGCCCCT
TTCGCCCGCGACACCAGTGTCACGGAATGGATCGGGGCTGCGGGCGACCGTGCGACCCTGCCATCCGCGCGCTGGGTCGA
TGAAAATCAGTCCGATCACATCGTCACCCGCGCCAATGACGCGCATCTGGCGATGGCCATGGCCTGCGCGGGGATCGGGC
GCGTTGTATTGCCGACTTTCGTGGGCGCGTCCGCCAGAACGCTGGTCCAGGTGGGCGAGCCGATTGAGGCGCTTCGGTCC
GAGCAGTGGCTGGTCTGCCACCACGAGGGTCGCCATGATCCGCCTGTGCGCCATGCGTTGACGGCGTTGGCGCAGTTTCT
AACGAGCAGCTAG

Upstream 100 bases:

>100_bases
TGTTTCCTTCTGTGCATGACGTGACAATGCCACAGCAGGCCGGTGCCTCGCGACAGACAGGATCGCGAGTTGGTTTTCAT
TTTTGCAAAGGATGCGGCTC

Downstream 100 bases:

>100_bases
GCCAGACGCGGGGTCCGGGCGATCAGGCCGTGGCGGTAAAGATATGCACGCGCGCGGGCACGAGGACCGCCCCTGCCTTG
TTCTGCATCTGCCGGAAGCG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator LysR Family; Transcriptional Regulator; Transcriptional Regulator Protein LysR Family; HTH-Type Transcriptional Regulator; LysR Family Transcriptional Activator; Lysr-Family Transcriptional Regulator; HTH Transcription Regulator Protein; LysR Family Transcription Regulator Protein; Transcriptional Regulator Protein; LysR Family Regulatory Protein; Transcriptonal Regulator LysR Family; Transcriptional Regulator Of LysR Family; Transcriptional Regulator Transcription Regulator Protein

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MWDDLALFSAVARHGSLTAAATQTDSSAATLSRRMKALEAAMDRPLFLHGRDGYALTAEGRELLQRTERMEAAAADIESW
RNQGPGKRRVRISAGSWTSDLLARHLADFWQPDFNWVPEFLHCERDMDIARRQIDIGVRNHKPDQPWLAGRRTGEVNFAP
FARDTSVTEWIGAAGDRATLPSARWVDENQSDHIVTRANDAHLAMAMACAGIGRVVLPTFVGASARTLVQVGEPIEALRS
EQWLVCHHEGRHDPPVRHALTALAQFLTSS

Sequences:

>Translated_270_residues
MWDDLALFSAVARHGSLTAAATQTDSSAATLSRRMKALEAAMDRPLFLHGRDGYALTAEGRELLQRTERMEAAAADIESW
RNQGPGKRRVRISAGSWTSDLLARHLADFWQPDFNWVPEFLHCERDMDIARRQIDIGVRNHKPDQPWLAGRRTGEVNFAP
FARDTSVTEWIGAAGDRATLPSARWVDENQSDHIVTRANDAHLAMAMACAGIGRVVLPTFVGASARTLVQVGEPIEALRS
EQWLVCHHEGRHDPPVRHALTALAQFLTSS
>Mature_270_residues
MWDDLALFSAVARHGSLTAAATQTDSSAATLSRRMKALEAAMDRPLFLHGRDGYALTAEGRELLQRTERMEAAAADIESW
RNQGPGKRRVRISAGSWTSDLLARHLADFWQPDFNWVPEFLHCERDMDIARRQIDIGVRNHKPDQPWLAGRRTGEVNFAP
FARDTSVTEWIGAAGDRATLPSARWVDENQSDHIVTRANDAHLAMAMACAGIGRVVLPTFVGASARTLVQVGEPIEALRS
EQWLVCHHEGRHDPPVRHALTALAQFLTSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29976; Mature: 29976

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWDDLALFSAVARHGSLTAAATQTDSSAATLSRRMKALEAAMDRPLFLHGRDGYALTAEG
CCCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCEEECHHH
RELLQRTERMEAAAADIESWRNQGPGKRRVRISAGSWTSDLLARHLADFWQPDFNWVPEF
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHH
LHCERDMDIARRQIDIGVRNHKPDQPWLAGRRTGEVNFAPFARDTSVTEWIGAAGDRATL
HHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCC
PSARWVDENQSDHIVTRANDAHLAMAMACAGIGRVVLPTFVGASARTLVQVGEPIEALRS
CCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHCCHHHHHCC
EQWLVCHHEGRHDPPVRHALTALAQFLTSS
CCEEEEECCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MWDDLALFSAVARHGSLTAAATQTDSSAATLSRRMKALEAAMDRPLFLHGRDGYALTAEG
CCCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCEEECHHH
RELLQRTERMEAAAADIESWRNQGPGKRRVRISAGSWTSDLLARHLADFWQPDFNWVPEF
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHH
LHCERDMDIARRQIDIGVRNHKPDQPWLAGRRTGEVNFAPFARDTSVTEWIGAAGDRATL
HHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCC
PSARWVDENQSDHIVTRANDAHLAMAMACAGIGRVVLPTFVGASARTLVQVGEPIEALRS
CCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHCCHHHHHCC
EQWLVCHHEGRHDPPVRHALTALAQFLTSS
CCEEEEECCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA