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The map label for this gene is 89055003

Identifier: 89055003

GI number: 89055003

Start: 2511368

End: 2511967

Strand: Direct

Name: 89055003

Synonym: Jann_2512

Alternate gene names: NA

Gene position: 2511368-2511967 (Clockwise)

Preceding gene: 89055002

Following gene: 89055012

Centisome position: 58.16

GC content: 64.67

Gene sequence:

>600_bases
ATGAGGATCATCGTTGTCGGAGCATCTGGGGATATCGGGCAGGCCGCATGTCGGGCGCTGGAGGGGACCCATGACCTGAT
CCGTGTCGGGCGATCCTCAGGCGACATAACGGCCGACATGAGCGATCCGCGGGCGGTGGCCGAGATGTACCGCCAAACGG
GGCCAGTTGATGCCGTGGTCTGCACCGCCGGAGAGGTTCATTTCGCCCTCCTGCTTGCGCAGACCCACGCCACGATGATG
GAAGGTTTGGCGCAAAAGACCATGGGGCAGATCAACCTTGTGCTTCAGGGGCTCACCCATGTTAGCGACGGCGGCTCCTT
CACCCTGACCAGTGGCATCCTGGATCGCAATCCGGTGCGTGGTGGCGTGGGGGCTGCAACCGCCAACGGCGCGCTTGCAG
GCTTCGTGACCGGGGCCGCGATCGAGATGCCCCGGCGGCTGCGTTTGAACGTGGTCAGCCCCGGCATGCTGGACACCTCA
GCCAGACGATACGGCGCGCTGTTTCCGGGGCATATCCCGGTACCGGACCACCGGGTCGGACAGGCCTATGTCAAATGCGT
TGACGGCGCGATGACGGGCCGGGTCATCTGCGTGGACTGA

Upstream 100 bases:

>100_bases
ATCAGACCGCCCTGGCCGCCCAACAGGCGCGTCTGGATGCCTGCCAGGCGCTGCTGGCCCAGAAGCTGACGCGCTACGAT
GAAATCCTGGGAGACGGGTG

Downstream 100 bases:

>100_bases
CGCCCCGGACGTCAGCCGGGCAGCGGGATGTGTTCTGCGTTGTCCGTGGGGGGCAGTTGAAAGCGGCCATGCATCCAATC
CCCCTCGCGCCACGCCTCCT

Product: short chain dehydrogenase

Products: NA

Alternate protein names: Short-Chain Dehydrogenase/Reductase SDR; Short-Chain Dehydrogenase; Dehydrogenase; Oxidoreductase Short Chain Dehydrogenase/Reductase Family; 3-Oxoacyl-[Acyl-Carrier-Protein] Reductase; NAD-Dependent Epimerase/Dehydratase; Oxidoreductase; Aklaviketone Reductase; Short Chain Dehydrogenase/Reductase Family Oxidoreductase; DTDP-4-Dehydrorhamnose Reductase; Short Chain Dehydrogenase Family Protein; Dehydrogenases With Different Specificities

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MRIIVVGASGDIGQAACRALEGTHDLIRVGRSSGDITADMSDPRAVAEMYRQTGPVDAVVCTAGEVHFALLLAQTHATMM
EGLAQKTMGQINLVLQGLTHVSDGGSFTLTSGILDRNPVRGGVGAATANGALAGFVTGAAIEMPRRLRLNVVSPGMLDTS
ARRYGALFPGHIPVPDHRVGQAYVKCVDGAMTGRVICVD

Sequences:

>Translated_199_residues
MRIIVVGASGDIGQAACRALEGTHDLIRVGRSSGDITADMSDPRAVAEMYRQTGPVDAVVCTAGEVHFALLLAQTHATMM
EGLAQKTMGQINLVLQGLTHVSDGGSFTLTSGILDRNPVRGGVGAATANGALAGFVTGAAIEMPRRLRLNVVSPGMLDTS
ARRYGALFPGHIPVPDHRVGQAYVKCVDGAMTGRVICVD
>Mature_199_residues
MRIIVVGASGDIGQAACRALEGTHDLIRVGRSSGDITADMSDPRAVAEMYRQTGPVDAVVCTAGEVHFALLLAQTHATMM
EGLAQKTMGQINLVLQGLTHVSDGGSFTLTSGILDRNPVRGGVGAATANGALAGFVTGAAIEMPRRLRLNVVSPGMLDTS
ARRYGALFPGHIPVPDHRVGQAYVKCVDGAMTGRVICVD

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20681; Mature: 20681

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIIVVGASGDIGQAACRALEGTHDLIRVGRSSGDITADMSDPRAVAEMYRQTGPVDAVV
CEEEEEECCCCHHHHHHHHHCCCHHHHHHCCCCCCEEECCCCHHHHHHHHHHCCCCCEEE
CTAGEVHFALLLAQTHATMMEGLAQKTMGQINLVLQGLTHVSDGGSFTLTSGILDRNPVR
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCC
GGVGAATANGALAGFVTGAAIEMPRRLRLNVVSPGMLDTSARRYGALFPGHIPVPDHRVG
CCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCHHH
QAYVKCVDGAMTGRVICVD
HHHHHHHCCCCCCEEEEEC
>Mature Secondary Structure
MRIIVVGASGDIGQAACRALEGTHDLIRVGRSSGDITADMSDPRAVAEMYRQTGPVDAVV
CEEEEEECCCCHHHHHHHHHCCCHHHHHHCCCCCCEEECCCCHHHHHHHHHHCCCCCEEE
CTAGEVHFALLLAQTHATMMEGLAQKTMGQINLVLQGLTHVSDGGSFTLTSGILDRNPVR
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCC
GGVGAATANGALAGFVTGAAIEMPRRLRLNVVSPGMLDTSARRYGALFPGHIPVPDHRVG
CCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCHHH
QAYVKCVDGAMTGRVICVD
HHHHHHHCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA