| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054980
Identifier: 89054980
GI number: 89054980
Start: 2487087
End: 2487665
Strand: Direct
Name: 89054980
Synonym: Jann_2489
Alternate gene names: NA
Gene position: 2487087-2487665 (Clockwise)
Preceding gene: 89054979
Following gene: 89054982
Centisome position: 57.6
GC content: 64.77
Gene sequence:
>579_bases ATGAGCGCGCTGATCCTCTTGCTTGCCGCAGGCACCTCAACCCGCATGCGCGGCACCGACAAGCTATTGGAACCGGTCGA TAATCAGCCCCTTCTGCGCCTGATGGCCGAGCGCTGCATCAAGGCCGGTGAGACGCGGATCATTCTCGGCCCGGATCAGG CCAGACGCCATGCGGCACTGGCGGACCTCGACGCCCACATCGTTGAGGCGGAGGGCGAGGACGGCATGGCCGCGTCCATC CGCGCGGGCGTCAAAGAGGTGAAAACCCGAAGCGTGATGATCGTTCTGGCCGATATGCCAGAGATCACGGCCAGCGATCT GCACCTTCTGCTGAGCCTGCATGCGCAAGGTCTGTCGCCGATCATTCAGGCCGCAACCCATGACGGAACGCCCGGGCAAC CGGTTGTCTTCGCGGCGAAATACCTCAAGAAACTGGCCGCGCTTCAAGGGGATGAAGGGGCGAAGAGCATTCTGACGGCC CATCGCCATGACGTGGTGCGGATCCCGCTGCAAGGGGACCGGGCCACGCTGGACCTCGACACGCCCGAGGCCTGGGCAGC CTGGCGCGCCTCCCGCTAA
Upstream 100 bases:
>100_bases CGGACGGCCTGAGCGTCGAGATCGAAATCCTCGGAGAGATGCGCCCGGCGCGGTTGATCACACGGCCGTTGTTCGACGGC GAAGACACGCGGATGCGTGG
Downstream 100 bases:
>100_bases CTGACCCTCAGAAAGAAAACGGACGACCCCAGTTCCCCGAGGTCGTCCGCTGCACTGGCTACGGTGAAATCATCTACTCG TTAAACAACAGGTACTCATT
Product: hypothetical protein
Products: NA
Alternate protein names: Protein Family UPF; Purine Catabolism Protein PucB; Molybdopterin Molybdochelatase; Molybdenum Cofactor Cytidylyltransferase; Nucleotide-Diphospho-Sugar Transferase; Molybdopterin Biosynthesis
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MSALILLLAAGTSTRMRGTDKLLEPVDNQPLLRLMAERCIKAGETRIILGPDQARRHAALADLDAHIVEAEGEDGMAASI RAGVKEVKTRSVMIVLADMPEITASDLHLLLSLHAQGLSPIIQAATHDGTPGQPVVFAAKYLKKLAALQGDEGAKSILTA HRHDVVRIPLQGDRATLDLDTPEAWAAWRASR
Sequences:
>Translated_192_residues MSALILLLAAGTSTRMRGTDKLLEPVDNQPLLRLMAERCIKAGETRIILGPDQARRHAALADLDAHIVEAEGEDGMAASI RAGVKEVKTRSVMIVLADMPEITASDLHLLLSLHAQGLSPIIQAATHDGTPGQPVVFAAKYLKKLAALQGDEGAKSILTA HRHDVVRIPLQGDRATLDLDTPEAWAAWRASR >Mature_191_residues SALILLLAAGTSTRMRGTDKLLEPVDNQPLLRLMAERCIKAGETRIILGPDQARRHAALADLDAHIVEAEGEDGMAASIR AGVKEVKTRSVMIVLADMPEITASDLHLLLSLHAQGLSPIIQAATHDGTPGQPVVFAAKYLKKLAALQGDEGAKSILTAH RHDVVRIPLQGDRATLDLDTPEAWAAWRASR
Specific function: Unknown
COG id: COG2068
COG function: function code R; Uncharacterized MobA-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20612; Mature: 20481
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALILLLAAGTSTRMRGTDKLLEPVDNQPLLRLMAERCIKAGETRIILGPDQARRHAAL CCEEEEEEECCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHH ADLDAHIVEAEGEDGMAASIRAGVKEVKTRSVMIVLADMPEITASDLHLLLSLHAQGLSP HHCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCHHH IIQAATHDGTPGQPVVFAAKYLKKLAALQGDEGAKSILTAHRHDVVRIPLQGDRATLDLD HHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEECCCCEEEECC TPEAWAAWRASR CCHHHHHHCCCC >Mature Secondary Structure SALILLLAAGTSTRMRGTDKLLEPVDNQPLLRLMAERCIKAGETRIILGPDQARRHAAL CEEEEEEECCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHH ADLDAHIVEAEGEDGMAASIRAGVKEVKTRSVMIVLADMPEITASDLHLLLSLHAQGLSP HHCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCHHH IIQAATHDGTPGQPVVFAAKYLKKLAALQGDEGAKSILTAHRHDVVRIPLQGDRATLDLD HHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEECCCCEEEECC TPEAWAAWRASR CCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA