| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is aroK [H]
Identifier: 89054977
GI number: 89054977
Start: 2482835
End: 2483407
Strand: Direct
Name: aroK [H]
Synonym: Jann_2486
Alternate gene names: 89054977
Gene position: 2482835-2483407 (Clockwise)
Preceding gene: 89054968
Following gene: 89054978
Centisome position: 57.5
GC content: 66.84
Gene sequence:
>573_bases ATGGGCGAAAGCGTGCCACAGGGGACGGGAAAGCTGGCCAGAAGCGTCGTGCTGATCGGCATGATGGGGGCGGGCAAAAC GGCCATTGGCCGGGCCCTGTCGGCGAGCCTGGGCGTGCCGATGCGCGACTCGGACACGGAAATCGTGCAATCCGCGCAGC TGACCATCGCCGAGATCTTCGAGCGCTTCGGAGAGTCGTTCTTTCGCGAAAAGGAAGGCCAGGTGATTGCCCGCCTCCTC GACGGCCCGCCCTGCATCCTGTCGACCGGCGGCGGCGCCTGGCTGTCAGAGGCCAACCGGGAGATGTTGTTGGCCCGCGC CAGTGTGGTCTGGCTTGAGGCCGATCTGCCACTGCTTTGGTCGAGGGTGAAACACAAATCCCACCGCCCGCTCCTGCGCA CCGAAGACCCCCGCGCGACCCTGGCAGCATTGCTGGAGGCGCGCACGCCGTCCTATGCGCTGGCGCCCCACAAGGTCACG GTGCGGCCCGAATGGTCGATCGACGCGACCGCCGATCAGGTCATGGATATCCTGCGCCACAATGGCACTGTGCCCGAGGC CGCCGCCCCATGA
Upstream 100 bases:
>100_bases CTGCCTGCGCAGGATACCATCGACGTTTGCCGCCGCTTGCGAGTTCATATAAGCCATGGACGGCGAGATTTCGCCACTGA TCGGGGGATTTTTTTCAGCC
Downstream 100 bases:
>100_bases GCGATACGGTCCGGGTCGAGTTGGGCGCGCGCGCCTATGATGTTGAAATCGGGGCAGGTCTTATCGCCTCCGCCGGGGCC CGCATCGCGCCGCTGCTGTC
Product: shikimate kinase
Products: NA
Alternate protein names: SK [H]
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MGESVPQGTGKLARSVVLIGMMGAGKTAIGRALSASLGVPMRDSDTEIVQSAQLTIAEIFERFGESFFREKEGQVIARLL DGPPCILSTGGGAWLSEANREMLLARASVVWLEADLPLLWSRVKHKSHRPLLRTEDPRATLAALLEARTPSYALAPHKVT VRPEWSIDATADQVMDILRHNGTVPEAAAP
Sequences:
>Translated_190_residues MGESVPQGTGKLARSVVLIGMMGAGKTAIGRALSASLGVPMRDSDTEIVQSAQLTIAEIFERFGESFFREKEGQVIARLL DGPPCILSTGGGAWLSEANREMLLARASVVWLEADLPLLWSRVKHKSHRPLLRTEDPRATLAALLEARTPSYALAPHKVT VRPEWSIDATADQVMDILRHNGTVPEAAAP >Mature_189_residues GESVPQGTGKLARSVVLIGMMGAGKTAIGRALSASLGVPMRDSDTEIVQSAQLTIAEIFERFGESFFREKEGQVIARLLD GPPCILSTGGGAWLSEANREMLLARASVVWLEADLPLLWSRVKHKSHRPLLRTEDPRATLAALLEARTPSYALAPHKVTV RPEWSIDATADQVMDILRHNGTVPEAAAP
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate [H]
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family [H]
Homologues:
Organism=Escherichia coli, GI87082255, Length=170, Percent_Identity=37.0588235294118, Blast_Score=103, Evalue=7e-24, Organism=Escherichia coli, GI1786587, Length=173, Percent_Identity=30.635838150289, Blast_Score=67, Evalue=7e-13,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR023000 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.71 [H]
Molecular weight: Translated: 20518; Mature: 20387
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGESVPQGTGKLARSVVLIGMMGAGKTAIGRALSASLGVPMRDSDTEIVQSAQLTIAEIF CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH ERFGESFFREKEGQVIARLLDGPPCILSTGGGAWLSEANREMLLARASVVWLEADLPLLW HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHCCHHHHHHHHEEEEEECCHHHHH SRVKHKSHRPLLRTEDPRATLAALLEARTPSYALAPHKVTVRPEWSIDATADQVMDILRH HHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCEEEECCCCCCCCCHHHHHHHHHC NGTVPEAAAP CCCCCCCCCC >Mature Secondary Structure GESVPQGTGKLARSVVLIGMMGAGKTAIGRALSASLGVPMRDSDTEIVQSAQLTIAEIF CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH ERFGESFFREKEGQVIARLLDGPPCILSTGGGAWLSEANREMLLARASVVWLEADLPLLW HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHCCHHHHHHHHEEEEEECCHHHHH SRVKHKSHRPLLRTEDPRATLAALLEARTPSYALAPHKVTVRPEWSIDATADQVMDILRH HHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCEEEECCCCCCCCCHHHHHHHHHC NGTVPEAAAP CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA