Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054969

Identifier: 89054969

GI number: 89054969

Start: 2474836

End: 2475150

Strand: Reverse

Name: 89054969

Synonym: Jann_2478

Alternate gene names: NA

Gene position: 2475150-2474836 (Counterclockwise)

Preceding gene: 89054970

Following gene: 89054966

Centisome position: 57.32

GC content: 63.49

Gene sequence:

>315_bases
GTGATGTCGTCGGTTCTGTGCTGGCTGGCCTCCATCTTGATGATGGCGGGGTTCAATTCAGCCGCGGCCAATTTCGCCGA
ACTCTACCTGTTGGTCACCGTTCTGGCGGCGATCCTGGCCGGGATCGATCCCTATGGCGGCTTTGGCAGGATCTCGGGCC
TGCTTCTGGCGCTGACCCTCCTGCAAACCCTGTCCAGCGGGTTCAACCTGCTGCGGCTGGATGCGTATCTGTCGCTCGCC
CCGTGGGGCTGTATTCTGCTGCTGGTGATCGCCCTCAGGCAGATCGCGCCGCGTGCACGGAGCCGACAGGGCTGA

Upstream 100 bases:

>100_bases
GGCAGATGCCCTTGGGCATCCGCATTCGCATTGTGGGCTCAAACCTCAACGCCGCATGGTTTTCAGGCGCGAATACGTCG
GCTGTGCTGATCAGGTCTAC

Downstream 100 bases:

>100_bases
GGCGTGGCATTGCCCGCGTCGCTGCAATTGCCATTTGATATCGCAACCGCACGGGTCAGCGATGTTCCGCATACGGGATT
TGGGTCAGTGTTGTGGTCGC

Product: putative ABC transporter permease

Products: NA

Alternate protein names: Monosaccharide-Transporting ATPase; ABC Transporter Permease Protein; Permease Component Of ABC Transporter; Simple Sugar Transport System Permease; Ribose ABC Transporter; Permease Component Of Sugar ABC Transport System; ABC Transporter Permease; ABC Sugar Transporter Permease Subunit; Ribose ABC Transporter Permease

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MMSSVLCWLASILMMAGFNSAAANFAELYLLVTVLAAILAGIDPYGGFGRISGLLLALTLLQTLSSGFNLLRLDAYLSLA
PWGCILLLVIALRQIAPRARSRQG

Sequences:

>Translated_104_residues
MMSSVLCWLASILMMAGFNSAAANFAELYLLVTVLAAILAGIDPYGGFGRISGLLLALTLLQTLSSGFNLLRLDAYLSLA
PWGCILLLVIALRQIAPRARSRQG
>Mature_104_residues
MMSSVLCWLASILMMAGFNSAAANFAELYLLVTVLAAILAGIDPYGGFGRISGLLLALTLLQTLSSGFNLLRLDAYLSLA
PWGCILLLVIALRQIAPRARSRQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11086; Mature: 11086

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSSVLCWLASILMMAGFNSAAANFAELYLLVTVLAAILAGIDPYGGFGRISGLLLALTL
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
LQTLSSGFNLLRLDAYLSLAPWGCILLLVIALRQIAPRARSRQG
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MMSSVLCWLASILMMAGFNSAAANFAELYLLVTVLAAILAGIDPYGGFGRISGLLLALTL
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
LQTLSSGFNLLRLDAYLSLAPWGCILLLVIALRQIAPRARSRQG
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA