Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054847

Identifier: 89054847

GI number: 89054847

Start: 2362196

End: 2362804

Strand: Reverse

Name: 89054847

Synonym: Jann_2356

Alternate gene names: NA

Gene position: 2362804-2362196 (Counterclockwise)

Preceding gene: 89054848

Following gene: 89054846

Centisome position: 54.72

GC content: 60.43

Gene sequence:

>609_bases
ATGAGCGATCTTCTGGACCTGCGGTTTCTCGGCAAGCTCGCAGTAGATACTATTCGCGACCCCAGAGGCAGTGCGGCAGA
GGTCCTGCGCCTGGCGCCCCCGCGACCCGCCCTGTGGCTGGCCTTTGCGCTGATGATCACCCTGTCCCTGATGATGGGGG
AAGTCGTCAGCATGATCGCGGCGCCGCCTGAAACCGGTCCGCTGACCGGGCAATCCGCGCTCGTCCTCGGGCTGATCCAG
GCCGCATTCCTGTTCCTGACAGTCTTTGCCATCACGCACATCGGGCGCGCCTTTGACGGCCAGGGTCACTTCGACGGCGC
GCTGGCGCTTATCACGTGGCTGCAATTCGTCTTCCTGCTGATCCAGCTTCTGCAACTGGTCCTCTTGCTGATCGCGCCCC
CCTTGGCCGCCTTACTGACCGTTCTGGCGATTGGCCTGTTTTTGTGGGTGCTGGTCAACTTCATCGCGGAACTCCATGAG
TTCCAATCTGTGAGCATGGTGTTCGTCATGACGCTGGTCAGCTTCGTCAGCATCATCTTCCTTATCAGCCTTGTCCTGAC
GGTCCTGGGCTTCACCTTCGAGCCGGGCGGTTTTTCCAATGAGCTATGA

Upstream 100 bases:

>100_bases
CGGCACAGCAGATCGCGGGCGTGATCGTTGTCGGATCGTTCCTGTTGTTCTGGAGCGTCTGCCTGCGTGAGGCCGAGACC
AACCCTGACGGAGCCGCGGC

Downstream 100 bases:

>100_bases
CGTACAGGCGATCCGAGCCGATTTCCCAATCCTGTCGCGTGAGGTGAACGGCAAGCCGCTCGTCTACCTCGACAATGGGG
CATCGGCCCAGAAGCCGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MSDLLDLRFLGKLAVDTIRDPRGSAAEVLRLAPPRPALWLAFALMITLSLMMGEVVSMIAAPPETGPLTGQSALVLGLIQ
AAFLFLTVFAITHIGRAFDGQGHFDGALALITWLQFVFLLIQLLQLVLLLIAPPLAALLTVLAIGLFLWVLVNFIAELHE
FQSVSMVFVMTLVSFVSIIFLISLVLTVLGFTFEPGGFSNEL

Sequences:

>Translated_202_residues
MSDLLDLRFLGKLAVDTIRDPRGSAAEVLRLAPPRPALWLAFALMITLSLMMGEVVSMIAAPPETGPLTGQSALVLGLIQ
AAFLFLTVFAITHIGRAFDGQGHFDGALALITWLQFVFLLIQLLQLVLLLIAPPLAALLTVLAIGLFLWVLVNFIAELHE
FQSVSMVFVMTLVSFVSIIFLISLVLTVLGFTFEPGGFSNEL
>Mature_201_residues
SDLLDLRFLGKLAVDTIRDPRGSAAEVLRLAPPRPALWLAFALMITLSLMMGEVVSMIAAPPETGPLTGQSALVLGLIQA
AFLFLTVFAITHIGRAFDGQGHFDGALALITWLQFVFLLIQLLQLVLLLIAPPLAALLTVLAIGLFLWVLVNFIAELHEF
QSVSMVFVMTLVSFVSIIFLISLVLTVLGFTFEPGGFSNEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21908; Mature: 21777

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS00014 ER_TARGET

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLLDLRFLGKLAVDTIRDPRGSAAEVLRLAPPRPALWLAFALMITLSLMMGEVVSMIA
CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
APPETGPLTGQSALVLGLIQAAFLFLTVFAITHIGRAFDGQGHFDGALALITWLQFVFLL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
IQLLQLVLLLIAPPLAALLTVLAIGLFLWVLVNFIAELHEFQSVSMVFVMTLVSFVSIIF
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LISLVLTVLGFTFEPGGFSNEL
HHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SDLLDLRFLGKLAVDTIRDPRGSAAEVLRLAPPRPALWLAFALMITLSLMMGEVVSMIA
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
APPETGPLTGQSALVLGLIQAAFLFLTVFAITHIGRAFDGQGHFDGALALITWLQFVFLL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
IQLLQLVLLLIAPPLAALLTVLAIGLFLWVLVNFIAELHEFQSVSMVFVMTLVSFVSIIF
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LISLVLTVLGFTFEPGGFSNEL
HHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA