| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054847
Identifier: 89054847
GI number: 89054847
Start: 2362196
End: 2362804
Strand: Reverse
Name: 89054847
Synonym: Jann_2356
Alternate gene names: NA
Gene position: 2362804-2362196 (Counterclockwise)
Preceding gene: 89054848
Following gene: 89054846
Centisome position: 54.72
GC content: 60.43
Gene sequence:
>609_bases ATGAGCGATCTTCTGGACCTGCGGTTTCTCGGCAAGCTCGCAGTAGATACTATTCGCGACCCCAGAGGCAGTGCGGCAGA GGTCCTGCGCCTGGCGCCCCCGCGACCCGCCCTGTGGCTGGCCTTTGCGCTGATGATCACCCTGTCCCTGATGATGGGGG AAGTCGTCAGCATGATCGCGGCGCCGCCTGAAACCGGTCCGCTGACCGGGCAATCCGCGCTCGTCCTCGGGCTGATCCAG GCCGCATTCCTGTTCCTGACAGTCTTTGCCATCACGCACATCGGGCGCGCCTTTGACGGCCAGGGTCACTTCGACGGCGC GCTGGCGCTTATCACGTGGCTGCAATTCGTCTTCCTGCTGATCCAGCTTCTGCAACTGGTCCTCTTGCTGATCGCGCCCC CCTTGGCCGCCTTACTGACCGTTCTGGCGATTGGCCTGTTTTTGTGGGTGCTGGTCAACTTCATCGCGGAACTCCATGAG TTCCAATCTGTGAGCATGGTGTTCGTCATGACGCTGGTCAGCTTCGTCAGCATCATCTTCCTTATCAGCCTTGTCCTGAC GGTCCTGGGCTTCACCTTCGAGCCGGGCGGTTTTTCCAATGAGCTATGA
Upstream 100 bases:
>100_bases CGGCACAGCAGATCGCGGGCGTGATCGTTGTCGGATCGTTCCTGTTGTTCTGGAGCGTCTGCCTGCGTGAGGCCGAGACC AACCCTGACGGAGCCGCGGC
Downstream 100 bases:
>100_bases CGTACAGGCGATCCGAGCCGATTTCCCAATCCTGTCGCGTGAGGTGAACGGCAAGCCGCTCGTCTACCTCGACAATGGGG CATCGGCCCAGAAGCCGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MSDLLDLRFLGKLAVDTIRDPRGSAAEVLRLAPPRPALWLAFALMITLSLMMGEVVSMIAAPPETGPLTGQSALVLGLIQ AAFLFLTVFAITHIGRAFDGQGHFDGALALITWLQFVFLLIQLLQLVLLLIAPPLAALLTVLAIGLFLWVLVNFIAELHE FQSVSMVFVMTLVSFVSIIFLISLVLTVLGFTFEPGGFSNEL
Sequences:
>Translated_202_residues MSDLLDLRFLGKLAVDTIRDPRGSAAEVLRLAPPRPALWLAFALMITLSLMMGEVVSMIAAPPETGPLTGQSALVLGLIQ AAFLFLTVFAITHIGRAFDGQGHFDGALALITWLQFVFLLIQLLQLVLLLIAPPLAALLTVLAIGLFLWVLVNFIAELHE FQSVSMVFVMTLVSFVSIIFLISLVLTVLGFTFEPGGFSNEL >Mature_201_residues SDLLDLRFLGKLAVDTIRDPRGSAAEVLRLAPPRPALWLAFALMITLSLMMGEVVSMIAAPPETGPLTGQSALVLGLIQA AFLFLTVFAITHIGRAFDGQGHFDGALALITWLQFVFLLIQLLQLVLLLIAPPLAALLTVLAIGLFLWVLVNFIAELHEF QSVSMVFVMTLVSFVSIIFLISLVLTVLGFTFEPGGFSNEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21908; Mature: 21777
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: PS00014 ER_TARGET
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLLDLRFLGKLAVDTIRDPRGSAAEVLRLAPPRPALWLAFALMITLSLMMGEVVSMIA CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH APPETGPLTGQSALVLGLIQAAFLFLTVFAITHIGRAFDGQGHFDGALALITWLQFVFLL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH IQLLQLVLLLIAPPLAALLTVLAIGLFLWVLVNFIAELHEFQSVSMVFVMTLVSFVSIIF HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LISLVLTVLGFTFEPGGFSNEL HHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SDLLDLRFLGKLAVDTIRDPRGSAAEVLRLAPPRPALWLAFALMITLSLMMGEVVSMIA CCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH APPETGPLTGQSALVLGLIQAAFLFLTVFAITHIGRAFDGQGHFDGALALITWLQFVFLL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH IQLLQLVLLLIAPPLAALLTVLAIGLFLWVLVNFIAELHEFQSVSMVFVMTLVSFVSIIF HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LISLVLTVLGFTFEPGGFSNEL HHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA