Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054816

Identifier: 89054816

GI number: 89054816

Start: 2330782

End: 2331357

Strand: Direct

Name: 89054816

Synonym: Jann_2325

Alternate gene names: NA

Gene position: 2330782-2331357 (Clockwise)

Preceding gene: 89054815

Following gene: 89054817

Centisome position: 53.98

GC content: 66.67

Gene sequence:

>576_bases
ATGGCAGATGGTCTTCCCACCGCTTCGCTTTCCCGGCGGTCTCTTCTCCTCGGCGCGGGATCTCTCCCGCTTCTCGCAGC
CTGCGGCAACCCGATTGGGAACTCCAACGCGCCGCGCATTGACAGCCGCGTGGATGCGGCGATCGCGTTCATGCAGCAGG
AGGTTCCGGGCACAGCCGATCTGGTGAGCCAGGCGTCGGGCATGTTGGTGATGCCCCTGATCTCGGAGGCGGGGTTCGGC
ATTGGCGGCAGCTACGGGCGCGGTGCGCTGCGGGTGGGCGGCGCGACGGTGGATTACTATTCCGCCGTGTCGGGCAGCTT
CGGCTTGCAGATCGGCGCGCAGCAATACGCCCACACCCTGTTTTTCATGACCCCGGGGGCGCTGGCCGAGTTCCGCAATT
CGGTGGGCTGGTCGGTGGGCGGCGACATCCGCTACGCCGTCAACACCGATGCGGGCACGTTGGGCTTCGACACTGCCACC
TTGGCCGATCCGGTGATTGCCGTGATCTACGGGCAAGCGGGCCTGATCATCGGCGCGACGCTGGACGGCACGCGCTATAC
GCGGATCATCCCCTGA

Upstream 100 bases:

>100_bases
GACAGGCCCTGCATTTCGGCGTATTCTTGCCGCCAAGGATCGGGGCGCAAAGTCCCGGCAATGGCAGTCACACAAGACAC
AATATAGGCAAGGTATTCCC

Downstream 100 bases:

>100_bases
CGACGCCGATACCAACGCGGCGCTCTCGCAACCGTGACTGGCCGCACTTGTGCGGTCGGTCCATCCTGTGACCTCCAGTC
CCCGGAGGTTTCCAATGTTG

Product: twin-arginine translocation pathway signal

Products: NA

Alternate protein names: Twin-Arginine Translocation Pathway Signal

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MADGLPTASLSRRSLLLGAGSLPLLAACGNPIGNSNAPRIDSRVDAAIAFMQQEVPGTADLVSQASGMLVMPLISEAGFG
IGGSYGRGALRVGGATVDYYSAVSGSFGLQIGAQQYAHTLFFMTPGALAEFRNSVGWSVGGDIRYAVNTDAGTLGFDTAT
LADPVIAVIYGQAGLIIGATLDGTRYTRIIP

Sequences:

>Translated_191_residues
MADGLPTASLSRRSLLLGAGSLPLLAACGNPIGNSNAPRIDSRVDAAIAFMQQEVPGTADLVSQASGMLVMPLISEAGFG
IGGSYGRGALRVGGATVDYYSAVSGSFGLQIGAQQYAHTLFFMTPGALAEFRNSVGWSVGGDIRYAVNTDAGTLGFDTAT
LADPVIAVIYGQAGLIIGATLDGTRYTRIIP
>Mature_190_residues
ADGLPTASLSRRSLLLGAGSLPLLAACGNPIGNSNAPRIDSRVDAAIAFMQQEVPGTADLVSQASGMLVMPLISEAGFGI
GGSYGRGALRVGGATVDYYSAVSGSFGLQIGAQQYAHTLFFMTPGALAEFRNSVGWSVGGDIRYAVNTDAGTLGFDTATL
ADPVIAVIYGQAGLIIGATLDGTRYTRIIP

Specific function: Unknown

COG id: COG2930

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19490; Mature: 19359

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADGLPTASLSRRSLLLGAGSLPLLAACGNPIGNSNAPRIDSRVDAAIAFMQQEVPGTAD
CCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHH
LVSQASGMLVMPLISEAGFGIGGSYGRGALRVGGATVDYYSAVSGSFGLQIGAQQYAHTL
HHHHCCCEEEEEEHHHCCCCCCCCCCCCEEEECCCEEEHHHHCCCCCCEEECHHHHHEEE
FFMTPGALAEFRNSVGWSVGGDIRYAVNTDAGTLGFDTATLADPVIAVIYGQAGLIIGAT
EEECCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHCCEEEEEECCCCEEEEEE
LDGTRYTRIIP
ECCCEEEEECC
>Mature Secondary Structure 
ADGLPTASLSRRSLLLGAGSLPLLAACGNPIGNSNAPRIDSRVDAAIAFMQQEVPGTAD
CCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHH
LVSQASGMLVMPLISEAGFGIGGSYGRGALRVGGATVDYYSAVSGSFGLQIGAQQYAHTL
HHHHCCCEEEEEEHHHCCCCCCCCCCCCEEEECCCEEEHHHHCCCCCCEEECHHHHHEEE
FFMTPGALAEFRNSVGWSVGGDIRYAVNTDAGTLGFDTATLADPVIAVIYGQAGLIIGAT
EEECCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHCCEEEEEECCCCEEEEEE
LDGTRYTRIIP
ECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA