| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054748
Identifier: 89054748
GI number: 89054748
Start: 2263686
End: 2263958
Strand: Reverse
Name: 89054748
Synonym: Jann_2257
Alternate gene names: NA
Gene position: 2263958-2263686 (Counterclockwise)
Preceding gene: 89054754
Following gene: 89054746
Centisome position: 52.43
GC content: 60.81
Gene sequence:
>273_bases ATGAAACTCGCATATATGACCCCCGCATCATGCATCGCCATCGCGTTCATCGGGATCTCCGCCGTGCAGGCGCAGACGGT TGACGTCTCCACACTTGTGACCCGCGCCCCGGCATCCGATTACCCGATCGTGCAAACGGTGCAGGCCCTCGTGCCCGTGC AACGCAGCTGCACGCAGCTCGAAATGAATTCGGGCATTGAACCGGCTCAATGCGGCCATCTCTCGCTGTCTGATGTCGCG GCCGCCTATTTCGCGCAGTCGGACGACGATTGA
Upstream 100 bases:
>100_bases CGATTGCGCCGGTCTCACACCCGACTGGCAGTGTAGCAGCGTGCCAGACGAGCATTGAAGTCCGCCGGTACAATTTTGAA ATCTGAAAGGACATAAGACC
Downstream 100 bases:
>100_bases CTGAATGACCCCGGGGCCCTGATTTGACGGGCCCCGGGATGTCGTGCGGAACCCCGGATCGTCCTGCGGGTCTGCCGGGA TGATGCCGGTTCGAGAGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MKLAYMTPASCIAIAFIGISAVQAQTVDVSTLVTRAPASDYPIVQTVQALVPVQRSCTQLEMNSGIEPAQCGHLSLSDVA AAYFAQSDDD
Sequences:
>Translated_90_residues MKLAYMTPASCIAIAFIGISAVQAQTVDVSTLVTRAPASDYPIVQTVQALVPVQRSCTQLEMNSGIEPAQCGHLSLSDVA AAYFAQSDDD >Mature_90_residues MKLAYMTPASCIAIAFIGISAVQAQTVDVSTLVTRAPASDYPIVQTVQALVPVQRSCTQLEMNSGIEPAQCGHLSLSDVA AAYFAQSDDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9463; Mature: 9463
Theoretical pI: Translated: 4.01; Mature: 4.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLAYMTPASCIAIAFIGISAVQAQTVDVSTLVTRAPASDYPIVQTVQALVPVQRSCTQL CEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH EMNSGIEPAQCGHLSLSDVAAAYFAQSDDD HHCCCCCCCCCCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure MKLAYMTPASCIAIAFIGISAVQAQTVDVSTLVTRAPASDYPIVQTVQALVPVQRSCTQL CEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH EMNSGIEPAQCGHLSLSDVAAAYFAQSDDD HHCCCCCCCCCCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA