| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is hmuV [H]
Identifier: 89054738
GI number: 89054738
Start: 2255731
End: 2256510
Strand: Reverse
Name: hmuV [H]
Synonym: Jann_2247
Alternate gene names: 89054738
Gene position: 2256510-2255731 (Counterclockwise)
Preceding gene: 89054739
Following gene: 89054732
Centisome position: 52.26
GC content: 63.72
Gene sequence:
>780_bases ATGCCTTCTGATCCAATGATCGAGATTGAGCGCCTGTCGGTGACGCTGGGGGGATCCCCCCGCGTCGATGACTTTTCGCT GACGGTGAAGACGGGGGCATTCCATGGCCTGCTTGGGCCGAACGGGGCCGGGAAAACCACGATCCTGCGCGTGCTGTATC GGGCGCAGGCACCCGATGGCGGTGTCGCCCGCATCAAGGGCACGCCGATTGACGACTGGCCCCGCTCGGAGTGGACGCGG GCTGTCGGCGCGCTTGTGCAGGATGGCGGCAGCCTTCAGGGGCTGAGCGTTCGGGACGTGATCGAGATCGGGATGATGAA CCTGCCACTATCGCCTCAGGCGCGGCAGGCCCGCATCGACGATGCCTTGGGGATTGCCGGCCTGCACCACATGGCCGATG CTGAAGCCGCACTGATATCGGGGGGGGAACGGCAGAAAACCCATATTGCCCAGATCCTTGCCCGCGCGCCGGAGGTCTAT GTGCTGGACGAGCCGAGCAATCACCTTGATATGTGCTACCAGATCCTGCTGCTGGATGAGATCAAGCGACGGGGCAAGAC CGTCATCGCGACCTTCCATGATCTGACCCTGGCCGCCCGGTATTGCGACACCGTCACCTTGATGCACGAAGGAAGGTACG TGGCGACCGGCCCGCCGCCCGATGTCCTGACGCGCGAGAACCTGGCAAATGTCTTCCGCCTCGATGGAGAGCTGCGGGAC GGTGTGGTCCGGATCAATTCCGCGATTCCTCAGGACGGTGGCGGTGATCTGCCCGACTAA
Upstream 100 bases:
>100_bases CTGTGCCGCATCCTTCTGGCGCCGGAGGAAATGCCCCTGGGGGTGTTGCTTGCTATCTTCGCGGCCCCGCCATTCATCCT GATCCTGCGGCGGGTGCGCC
Downstream 100 bases:
>100_bases CACACCAGATTCGGTGCGACTGCTGCATTTTGTCGACGAACGTCCCCAAGAGGTCAAAAAGACCCAAACGCGGTCCAGCG ACGCTTCGCGCGTCGAACAT
Product: ABC transporter-like protein
Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MPSDPMIEIERLSVTLGGSPRVDDFSLTVKTGAFHGLLGPNGAGKTTILRVLYRAQAPDGGVARIKGTPIDDWPRSEWTR AVGALVQDGGSLQGLSVRDVIEIGMMNLPLSPQARQARIDDALGIAGLHHMADAEAALISGGERQKTHIAQILARAPEVY VLDEPSNHLDMCYQILLLDEIKRRGKTVIATFHDLTLAARYCDTVTLMHEGRYVATGPPPDVLTRENLANVFRLDGELRD GVVRINSAIPQDGGGDLPD
Sequences:
>Translated_259_residues MPSDPMIEIERLSVTLGGSPRVDDFSLTVKTGAFHGLLGPNGAGKTTILRVLYRAQAPDGGVARIKGTPIDDWPRSEWTR AVGALVQDGGSLQGLSVRDVIEIGMMNLPLSPQARQARIDDALGIAGLHHMADAEAALISGGERQKTHIAQILARAPEVY VLDEPSNHLDMCYQILLLDEIKRRGKTVIATFHDLTLAARYCDTVTLMHEGRYVATGPPPDVLTRENLANVFRLDGELRD GVVRINSAIPQDGGGDLPD >Mature_258_residues PSDPMIEIERLSVTLGGSPRVDDFSLTVKTGAFHGLLGPNGAGKTTILRVLYRAQAPDGGVARIKGTPIDDWPRSEWTRA VGALVQDGGSLQGLSVRDVIEIGMMNLPLSPQARQARIDDALGIAGLHHMADAEAALISGGERQKTHIAQILARAPEVYV LDEPSNHLDMCYQILLLDEIKRRGKTVIATFHDLTLAARYCDTVTLMHEGRYVATGPPPDVLTRENLANVFRLDGELRDG VVRINSAIPQDGGGDLPD
Specific function: Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system [H]
COG id: COG1120
COG function: function code PH; ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI171184400, Length=223, Percent_Identity=27.8026905829596, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI62526033, Length=203, Percent_Identity=28.5714285714286, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI31657092, Length=210, Percent_Identity=28.5714285714286, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI150417984, Length=204, Percent_Identity=29.9019607843137, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI9955963, Length=227, Percent_Identity=28.6343612334802, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI215820660, Length=168, Percent_Identity=29.7619047619048, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI20143975, Length=168, Percent_Identity=29.7619047619048, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI105990541, Length=204, Percent_Identity=27.4509803921569, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI255708477, Length=234, Percent_Identity=23.9316239316239, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI46592956, Length=172, Percent_Identity=28.4883720930233, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI46592964, Length=172, Percent_Identity=28.4883720930233, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI46592978, Length=172, Percent_Identity=28.4883720930233, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI46592971, Length=172, Percent_Identity=28.4883720930233, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI46592898, Length=172, Percent_Identity=28.4883720930233, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI46592915, Length=172, Percent_Identity=28.4883720930233, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI9665248, Length=205, Percent_Identity=26.8292682926829, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI9955968, Length=232, Percent_Identity=24.5689655172414, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI11967969, Length=222, Percent_Identity=27.027027027027, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI9955966, Length=232, Percent_Identity=24.5689655172414, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI45243524, Length=232, Percent_Identity=24.5689655172414, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI45446740, Length=221, Percent_Identity=28.5067873303167, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI47078218, Length=221, Percent_Identity=28.5067873303167, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI116734710, Length=217, Percent_Identity=28.5714285714286, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI156105685, Length=216, Percent_Identity=27.3148148148148, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI27881501, Length=224, Percent_Identity=25.4464285714286, Blast_Score=65, Evalue=6e-11, Organism=Homo sapiens, GI30795238, Length=224, Percent_Identity=25.4464285714286, Blast_Score=65, Evalue=6e-11, Organism=Homo sapiens, GI4505771, Length=227, Percent_Identity=25.1101321585903, Blast_Score=65, Evalue=9e-11, Organism=Homo sapiens, GI9961252, Length=227, Percent_Identity=25.1101321585903, Blast_Score=64, Evalue=9e-11, Organism=Escherichia coli, GI1790739, Length=240, Percent_Identity=33.3333333333333, Blast_Score=140, Evalue=7e-35, Organism=Escherichia coli, GI1786345, Length=238, Percent_Identity=32.3529411764706, Blast_Score=135, Evalue=4e-33, Organism=Escherichia coli, GI1786803, Length=235, Percent_Identity=31.9148936170213, Blast_Score=126, Evalue=1e-30, Organism=Escherichia coli, GI87081791, Length=222, Percent_Identity=28.8288288288288, Blast_Score=108, Evalue=3e-25, Organism=Escherichia coli, GI1787712, Length=223, Percent_Identity=30.9417040358744, Blast_Score=106, Evalue=1e-24, Organism=Escherichia coli, GI1788450, Length=232, Percent_Identity=30.6034482758621, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1788761, Length=257, Percent_Identity=28.7937743190661, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI87081709, Length=226, Percent_Identity=29.2035398230088, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1789593, Length=228, Percent_Identity=29.8245614035088, Blast_Score=94, Evalue=9e-21, Organism=Escherichia coli, GI1790467, Length=217, Percent_Identity=27.6497695852535, Blast_Score=92, Evalue=2e-20, Organism=Escherichia coli, GI1789032, Length=224, Percent_Identity=28.125, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI1786398, Length=215, Percent_Identity=29.3023255813954, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI87081782, Length=227, Percent_Identity=27.7533039647577, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1789891, Length=214, Percent_Identity=29.9065420560748, Blast_Score=83, Evalue=1e-17, Organism=Escherichia coli, GI1787370, Length=233, Percent_Identity=26.1802575107296, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1786563, Length=210, Percent_Identity=30, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI48994943, Length=231, Percent_Identity=27.2727272727273, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1790525, Length=232, Percent_Identity=26.2931034482759, Blast_Score=81, Evalue=9e-17, Organism=Escherichia coli, GI48994883, Length=242, Percent_Identity=27.6859504132231, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1787089, Length=221, Percent_Identity=28.9592760180996, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1788225, Length=224, Percent_Identity=27.2321428571429, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1789873, Length=213, Percent_Identity=29.5774647887324, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1788472, Length=227, Percent_Identity=24.2290748898678, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1789751, Length=213, Percent_Identity=27.6995305164319, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1786253, Length=207, Percent_Identity=28.9855072463768, Blast_Score=71, Evalue=6e-14, Organism=Escherichia coli, GI1790544, Length=254, Percent_Identity=25.1968503937008, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1788506, Length=261, Percent_Identity=27.5862068965517, Blast_Score=71, Evalue=9e-14, Organism=Escherichia coli, GI1788002, Length=227, Percent_Identity=25.5506607929515, Blast_Score=71, Evalue=9e-14, Organism=Escherichia coli, GI2367384, Length=178, Percent_Identity=28.0898876404494, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1789864, Length=241, Percent_Identity=24.0663900414938, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1787029, Length=220, Percent_Identity=22.7272727272727, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1788210, Length=228, Percent_Identity=25.8771929824561, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1789672, Length=235, Percent_Identity=26.8085106382979, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI87081834, Length=211, Percent_Identity=27.9620853080569, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1788053, Length=199, Percent_Identity=27.6381909547739, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1790190, Length=217, Percent_Identity=26.7281105990783, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI87082267, Length=227, Percent_Identity=25.9911894273128, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI1789962, Length=247, Percent_Identity=24.2914979757085, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1788897, Length=212, Percent_Identity=26.8867924528302, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1786703, Length=216, Percent_Identity=28.2407407407407, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1787164, Length=195, Percent_Identity=29.2307692307692, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1787547, Length=213, Percent_Identity=25.3521126760563, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1786319, Length=223, Percent_Identity=23.7668161434978, Blast_Score=62, Evalue=4e-11, Organism=Escherichia coli, GI1786872, Length=221, Percent_Identity=26.2443438914027, Blast_Score=62, Evalue=4e-11, Organism=Escherichia coli, GI1786653, Length=234, Percent_Identity=23.5042735042735, Blast_Score=61, Evalue=8e-11, Organism=Escherichia coli, GI1787758, Length=213, Percent_Identity=26.7605633802817, Blast_Score=61, Evalue=9e-11, Organism=Caenorhabditis elegans, GI25146777, Length=237, Percent_Identity=24.8945147679325, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI212646699, Length=211, Percent_Identity=26.5402843601896, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17558664, Length=210, Percent_Identity=27.1428571428571, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI115533608, Length=201, Percent_Identity=29.8507462686567, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71992290, Length=239, Percent_Identity=25.9414225941423, Blast_Score=71, Evalue=4e-13, Organism=Caenorhabditis elegans, GI115534520, Length=237, Percent_Identity=24.4725738396624, Blast_Score=71, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17565938, Length=203, Percent_Identity=25.1231527093596, Blast_Score=70, Evalue=8e-13, Organism=Caenorhabditis elegans, GI17533971, Length=223, Percent_Identity=26.457399103139, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17511077, Length=217, Percent_Identity=26.2672811059908, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17569145, Length=220, Percent_Identity=23.6363636363636, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17510237, Length=219, Percent_Identity=25.5707762557078, Blast_Score=67, Evalue=9e-12, Organism=Caenorhabditis elegans, GI17569143, Length=220, Percent_Identity=24.0909090909091, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI193211017, Length=212, Percent_Identity=24.0566037735849, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI193211015, Length=212, Percent_Identity=24.0566037735849, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71996809, Length=212, Percent_Identity=24.0566037735849, Blast_Score=66, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6322640, Length=228, Percent_Identity=22.8070175438596, Blast_Score=70, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6323217, Length=269, Percent_Identity=24.5353159851301, Blast_Score=69, Evalue=6e-13, Organism=Saccharomyces cerevisiae, GI6324985, Length=238, Percent_Identity=24.7899159663866, Blast_Score=68, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6323278, Length=202, Percent_Identity=25.7425742574257, Blast_Score=65, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6324314, Length=203, Percent_Identity=24.1379310344828, Blast_Score=62, Evalue=8e-11, Organism=Drosophila melanogaster, GI24653245, Length=232, Percent_Identity=25.4310344827586, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI281363262, Length=232, Percent_Identity=25.4310344827586, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI21357907, Length=228, Percent_Identity=28.0701754385965, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI23397593, Length=218, Percent_Identity=27.9816513761468, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI24641565, Length=242, Percent_Identity=26.8595041322314, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24643674, Length=213, Percent_Identity=26.7605633802817, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI161076682, Length=238, Percent_Identity=26.4705882352941, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI161076684, Length=238, Percent_Identity=26.4705882352941, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24581617, Length=238, Percent_Identity=26.4705882352941, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24581615, Length=238, Percent_Identity=26.4705882352941, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI28574533, Length=229, Percent_Identity=28.3842794759825, Blast_Score=67, Evalue=8e-12, Organism=Drosophila melanogaster, GI24659289, Length=217, Percent_Identity=26.2672811059908, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24662800, Length=201, Percent_Identity=25.8706467661692, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI24666092, Length=199, Percent_Identity=24.6231155778894, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR015863 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 27956; Mature: 27825
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSDPMIEIERLSVTLGGSPRVDDFSLTVKTGAFHGLLGPNGAGKTTILRVLYRAQAPDG CCCCCCEEEEEEEEEECCCCCCCCEEEEEECCCEECCCCCCCCCHHHHHHHHHHHCCCCC GVARIKGTPIDDWPRSEWTRAVGALVQDGGSLQGLSVRDVIEIGMMNLPLSPQARQARID CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHH DALGIAGLHHMADAEAALISGGERQKTHIAQILARAPEVYVLDEPSNHLDMCYQILLLDE HHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHH IKRRGKTVIATFHDLTLAARYCDTVTLMHEGRYVATGPPPDVLTRENLANVFRLDGELRD HHHCCCEEEEEHHHHHHHHHHHHEEEEEECCEEEECCCCCCHHCHHHHHHHHHCCCCHHC GVVRINSAIPQDGGGDLPD CEEEECCCCCCCCCCCCCC >Mature Secondary Structure PSDPMIEIERLSVTLGGSPRVDDFSLTVKTGAFHGLLGPNGAGKTTILRVLYRAQAPDG CCCCCEEEEEEEEEECCCCCCCCEEEEEECCCEECCCCCCCCCHHHHHHHHHHHCCCCC GVARIKGTPIDDWPRSEWTRAVGALVQDGGSLQGLSVRDVIEIGMMNLPLSPQARQARID CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHH DALGIAGLHHMADAEAALISGGERQKTHIAQILARAPEVYVLDEPSNHLDMCYQILLLDE HHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHH IKRRGKTVIATFHDLTLAARYCDTVTLMHEGRYVATGPPPDVLTRENLANVFRLDGELRD HHHCCCEEEEEHHHHHHHHHHHHEEEEEECCEEEECCCCCCHHCHHHHHHHHHCCCCHHC GVVRINSAIPQDGGGDLPD CEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]
Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA