| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054732
Identifier: 89054732
GI number: 89054732
Start: 2248080
End: 2249291
Strand: Reverse
Name: 89054732
Synonym: Jann_2241
Alternate gene names: NA
Gene position: 2249291-2248080 (Counterclockwise)
Preceding gene: 89054738
Following gene: 89054726
Centisome position: 52.09
GC content: 62.79
Gene sequence:
>1212_bases ATGATTGATTGGACAATTGCCGTGCTGGAGGGGTACCGGGATATGGGCAATACCGGTCAGGTCGCCTTTGTAGCCACGAT CCTCGCCCCGCTTCTGGCCGTTTACGGTATTATGCGACTGCTGGCCCGGCGTGGATATGAAACCTCCCAGGCCATGGAGG CCAAGCTTAAGATTGCGCGCAACGATGCCGCGAACCTGGAAAAGGACAAGACGGCTCTCGAACGCGAAAACGCGATCCTG TCAGCCCGCCTGCCCGAAGCCTTTATCGAACGCCTCGACGCGCATATCGCTCAGGGCAATGAGGATCCCGCCACCCGTGA CGTCTACGAGCTACTCGGTGAATTCGGCCCCGCGCTGACCGCCGCCTTCGACCACCTGGCGCGGGAGGAAGCAAAGAACG TCGCCACCACCGAAGACGCGCGCGCGCAAGCCATGTTCTACCGCCTCGCCCGCGACAATGCCCGGATCGCCCTGGCCCTC ACGCCCGATCATGCGGAAATGGCCGGGTTGGAAGAGGAACTGGCAGTTGCCACCGCCGCAGCCGAACAGGGCCTGAAGGT CATCCCAACCGACGACGCTATCCGCGAACTGCGCTGGAAAAGCCGGGGGGATCAGGAGCGCTCGGTGCCCGTGCTGCTCG CGGTCTGGGATCGGAACAGGAAACGAGGCACTTACCACCTCGCCCTCGCCGCCGCAAAAGAGGCCCGCCGCCTCGCTAGC CGCGGCGGCGCGGAACTCTGTCGCGATGCGCTTTTCGCCGCCCATGCCATGGCGGATTCCCAATTGCGTCTCGGCGCCTA TGGGGCGTCCCTGTCGCTGGCAGAAGCGACAGCGCAGCAGCAAACCAACGCTTTTGGAGCCGGTGACCCCAACACGCTTT CCACCCGCTACCTCATCGCGAACATCCTCACGCAAAAAGGTGACTACGACGCTGCCCTGCTCGAGGCAAAGGCCGTCCGT TCAGCGCGCGAGGCACATCCGGATGTGGGGCCGAGCCATCCCCACACGCTGCGCACTATTCTGCTGATTGCCGAGATCCA CCATGCCAGTGGAGACGACGCGCTCGCGCGTATTGTTTTGGACGAGGTGCACCCAAAAATCGCGGCGCTTGACCTTGCCG AGGGTCATAATTGGTTGACTACCATGAACGCCTTGGACGCCGCGTTGGCGGCTGGTTCGGGACAGCCCGAGAAAGGGTTA AGAAACCGTTAA
Upstream 100 bases:
>100_bases CGCACCGCAGATGATGACCTTCATGTGGAGGTGTACCCTTAACCTGCTTGTCCGAACGGGACGCCTCTGCAAGCATTACC CATAAAGCGAAAGGGTTGAA
Downstream 100 bases:
>100_bases CGAATATTCGTTTATCGTTTGGTATGAACGACTTAACCAGTCTGCTCAACCTTGAGCACTCCTACCCTTCGCTGACCTGA GCCACCCGCGTTCCGGCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MIDWTIAVLEGYRDMGNTGQVAFVATILAPLLAVYGIMRLLARRGYETSQAMEAKLKIARNDAANLEKDKTALERENAIL SARLPEAFIERLDAHIAQGNEDPATRDVYELLGEFGPALTAAFDHLAREEAKNVATTEDARAQAMFYRLARDNARIALAL TPDHAEMAGLEEELAVATAAAEQGLKVIPTDDAIRELRWKSRGDQERSVPVLLAVWDRNRKRGTYHLALAAAKEARRLAS RGGAELCRDALFAAHAMADSQLRLGAYGASLSLAEATAQQQTNAFGAGDPNTLSTRYLIANILTQKGDYDAALLEAKAVR SAREAHPDVGPSHPHTLRTILLIAEIHHASGDDALARIVLDEVHPKIAALDLAEGHNWLTTMNALDAALAAGSGQPEKGL RNR
Sequences:
>Translated_403_residues MIDWTIAVLEGYRDMGNTGQVAFVATILAPLLAVYGIMRLLARRGYETSQAMEAKLKIARNDAANLEKDKTALERENAIL SARLPEAFIERLDAHIAQGNEDPATRDVYELLGEFGPALTAAFDHLAREEAKNVATTEDARAQAMFYRLARDNARIALAL TPDHAEMAGLEEELAVATAAAEQGLKVIPTDDAIRELRWKSRGDQERSVPVLLAVWDRNRKRGTYHLALAAAKEARRLAS RGGAELCRDALFAAHAMADSQLRLGAYGASLSLAEATAQQQTNAFGAGDPNTLSTRYLIANILTQKGDYDAALLEAKAVR SAREAHPDVGPSHPHTLRTILLIAEIHHASGDDALARIVLDEVHPKIAALDLAEGHNWLTTMNALDAALAAGSGQPEKGL RNR >Mature_403_residues MIDWTIAVLEGYRDMGNTGQVAFVATILAPLLAVYGIMRLLARRGYETSQAMEAKLKIARNDAANLEKDKTALERENAIL SARLPEAFIERLDAHIAQGNEDPATRDVYELLGEFGPALTAAFDHLAREEAKNVATTEDARAQAMFYRLARDNARIALAL TPDHAEMAGLEEELAVATAAAEQGLKVIPTDDAIRELRWKSRGDQERSVPVLLAVWDRNRKRGTYHLALAAAKEARRLAS RGGAELCRDALFAAHAMADSQLRLGAYGASLSLAEATAQQQTNAFGAGDPNTLSTRYLIANILTQKGDYDAALLEAKAVR SAREAHPDVGPSHPHTLRTILLIAEIHHASGDDALARIVLDEVHPKIAALDLAEGHNWLTTMNALDAALAAGSGQPEKGL RNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43653; Mature: 43653
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDWTIAVLEGYRDMGNTGQVAFVATILAPLLAVYGIMRLLARRGYETSQAMEAKLKIAR CCCEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC NDAANLEKDKTALERENAILSARLPEAFIERLDAHIAQGNEDPATRDVYELLGEFGPALT CCCCCCHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCHHHH AAFDHLAREEAKNVATTEDARAQAMFYRLARDNARIALALTPDHAEMAGLEEELAVATAA HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCHHHHHHHHHH AEQGLKVIPTDDAIRELRWKSRGDQERSVPVLLAVWDRNRKRGTYHLALAAAKEARRLAS HHCCCEEECCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEEHHHHHHHHHHHHH RGGAELCRDALFAAHAMADSQLRLGAYGASLSLAEATAQQQTNAFGAGDPNTLSTRYLIA CCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH NILTQKGDYDAALLEAKAVRSAREAHPDVGPSHPHTLRTILLIAEIHHASGDDALARIVL HHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH DEVHPKIAALDLAEGHNWLTTMNALDAALAAGSGQPEKGLRNR HHHCCHHEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MIDWTIAVLEGYRDMGNTGQVAFVATILAPLLAVYGIMRLLARRGYETSQAMEAKLKIAR CCCEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC NDAANLEKDKTALERENAILSARLPEAFIERLDAHIAQGNEDPATRDVYELLGEFGPALT CCCCCCHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCHHHH AAFDHLAREEAKNVATTEDARAQAMFYRLARDNARIALALTPDHAEMAGLEEELAVATAA HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCHHHHHHHHHH AEQGLKVIPTDDAIRELRWKSRGDQERSVPVLLAVWDRNRKRGTYHLALAAAKEARRLAS HHCCCEEECCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEEHHHHHHHHHHHHH RGGAELCRDALFAAHAMADSQLRLGAYGASLSLAEATAQQQTNAFGAGDPNTLSTRYLIA CCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH NILTQKGDYDAALLEAKAVRSAREAHPDVGPSHPHTLRTILLIAEIHHASGDDALARIVL HHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH DEVHPKIAALDLAEGHNWLTTMNALDAALAAGSGQPEKGLRNR HHHCCHHEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA