Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054732

Identifier: 89054732

GI number: 89054732

Start: 2248080

End: 2249291

Strand: Reverse

Name: 89054732

Synonym: Jann_2241

Alternate gene names: NA

Gene position: 2249291-2248080 (Counterclockwise)

Preceding gene: 89054738

Following gene: 89054726

Centisome position: 52.09

GC content: 62.79

Gene sequence:

>1212_bases
ATGATTGATTGGACAATTGCCGTGCTGGAGGGGTACCGGGATATGGGCAATACCGGTCAGGTCGCCTTTGTAGCCACGAT
CCTCGCCCCGCTTCTGGCCGTTTACGGTATTATGCGACTGCTGGCCCGGCGTGGATATGAAACCTCCCAGGCCATGGAGG
CCAAGCTTAAGATTGCGCGCAACGATGCCGCGAACCTGGAAAAGGACAAGACGGCTCTCGAACGCGAAAACGCGATCCTG
TCAGCCCGCCTGCCCGAAGCCTTTATCGAACGCCTCGACGCGCATATCGCTCAGGGCAATGAGGATCCCGCCACCCGTGA
CGTCTACGAGCTACTCGGTGAATTCGGCCCCGCGCTGACCGCCGCCTTCGACCACCTGGCGCGGGAGGAAGCAAAGAACG
TCGCCACCACCGAAGACGCGCGCGCGCAAGCCATGTTCTACCGCCTCGCCCGCGACAATGCCCGGATCGCCCTGGCCCTC
ACGCCCGATCATGCGGAAATGGCCGGGTTGGAAGAGGAACTGGCAGTTGCCACCGCCGCAGCCGAACAGGGCCTGAAGGT
CATCCCAACCGACGACGCTATCCGCGAACTGCGCTGGAAAAGCCGGGGGGATCAGGAGCGCTCGGTGCCCGTGCTGCTCG
CGGTCTGGGATCGGAACAGGAAACGAGGCACTTACCACCTCGCCCTCGCCGCCGCAAAAGAGGCCCGCCGCCTCGCTAGC
CGCGGCGGCGCGGAACTCTGTCGCGATGCGCTTTTCGCCGCCCATGCCATGGCGGATTCCCAATTGCGTCTCGGCGCCTA
TGGGGCGTCCCTGTCGCTGGCAGAAGCGACAGCGCAGCAGCAAACCAACGCTTTTGGAGCCGGTGACCCCAACACGCTTT
CCACCCGCTACCTCATCGCGAACATCCTCACGCAAAAAGGTGACTACGACGCTGCCCTGCTCGAGGCAAAGGCCGTCCGT
TCAGCGCGCGAGGCACATCCGGATGTGGGGCCGAGCCATCCCCACACGCTGCGCACTATTCTGCTGATTGCCGAGATCCA
CCATGCCAGTGGAGACGACGCGCTCGCGCGTATTGTTTTGGACGAGGTGCACCCAAAAATCGCGGCGCTTGACCTTGCCG
AGGGTCATAATTGGTTGACTACCATGAACGCCTTGGACGCCGCGTTGGCGGCTGGTTCGGGACAGCCCGAGAAAGGGTTA
AGAAACCGTTAA

Upstream 100 bases:

>100_bases
CGCACCGCAGATGATGACCTTCATGTGGAGGTGTACCCTTAACCTGCTTGTCCGAACGGGACGCCTCTGCAAGCATTACC
CATAAAGCGAAAGGGTTGAA

Downstream 100 bases:

>100_bases
CGAATATTCGTTTATCGTTTGGTATGAACGACTTAACCAGTCTGCTCAACCTTGAGCACTCCTACCCTTCGCTGACCTGA
GCCACCCGCGTTCCGGCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MIDWTIAVLEGYRDMGNTGQVAFVATILAPLLAVYGIMRLLARRGYETSQAMEAKLKIARNDAANLEKDKTALERENAIL
SARLPEAFIERLDAHIAQGNEDPATRDVYELLGEFGPALTAAFDHLAREEAKNVATTEDARAQAMFYRLARDNARIALAL
TPDHAEMAGLEEELAVATAAAEQGLKVIPTDDAIRELRWKSRGDQERSVPVLLAVWDRNRKRGTYHLALAAAKEARRLAS
RGGAELCRDALFAAHAMADSQLRLGAYGASLSLAEATAQQQTNAFGAGDPNTLSTRYLIANILTQKGDYDAALLEAKAVR
SAREAHPDVGPSHPHTLRTILLIAEIHHASGDDALARIVLDEVHPKIAALDLAEGHNWLTTMNALDAALAAGSGQPEKGL
RNR

Sequences:

>Translated_403_residues
MIDWTIAVLEGYRDMGNTGQVAFVATILAPLLAVYGIMRLLARRGYETSQAMEAKLKIARNDAANLEKDKTALERENAIL
SARLPEAFIERLDAHIAQGNEDPATRDVYELLGEFGPALTAAFDHLAREEAKNVATTEDARAQAMFYRLARDNARIALAL
TPDHAEMAGLEEELAVATAAAEQGLKVIPTDDAIRELRWKSRGDQERSVPVLLAVWDRNRKRGTYHLALAAAKEARRLAS
RGGAELCRDALFAAHAMADSQLRLGAYGASLSLAEATAQQQTNAFGAGDPNTLSTRYLIANILTQKGDYDAALLEAKAVR
SAREAHPDVGPSHPHTLRTILLIAEIHHASGDDALARIVLDEVHPKIAALDLAEGHNWLTTMNALDAALAAGSGQPEKGL
RNR
>Mature_403_residues
MIDWTIAVLEGYRDMGNTGQVAFVATILAPLLAVYGIMRLLARRGYETSQAMEAKLKIARNDAANLEKDKTALERENAIL
SARLPEAFIERLDAHIAQGNEDPATRDVYELLGEFGPALTAAFDHLAREEAKNVATTEDARAQAMFYRLARDNARIALAL
TPDHAEMAGLEEELAVATAAAEQGLKVIPTDDAIRELRWKSRGDQERSVPVLLAVWDRNRKRGTYHLALAAAKEARRLAS
RGGAELCRDALFAAHAMADSQLRLGAYGASLSLAEATAQQQTNAFGAGDPNTLSTRYLIANILTQKGDYDAALLEAKAVR
SAREAHPDVGPSHPHTLRTILLIAEIHHASGDDALARIVLDEVHPKIAALDLAEGHNWLTTMNALDAALAAGSGQPEKGL
RNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43653; Mature: 43653

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDWTIAVLEGYRDMGNTGQVAFVATILAPLLAVYGIMRLLARRGYETSQAMEAKLKIAR
CCCEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
NDAANLEKDKTALERENAILSARLPEAFIERLDAHIAQGNEDPATRDVYELLGEFGPALT
CCCCCCHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCHHHH
AAFDHLAREEAKNVATTEDARAQAMFYRLARDNARIALALTPDHAEMAGLEEELAVATAA
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCHHHHHHHHHH
AEQGLKVIPTDDAIRELRWKSRGDQERSVPVLLAVWDRNRKRGTYHLALAAAKEARRLAS
HHCCCEEECCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEEHHHHHHHHHHHHH
RGGAELCRDALFAAHAMADSQLRLGAYGASLSLAEATAQQQTNAFGAGDPNTLSTRYLIA
CCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
NILTQKGDYDAALLEAKAVRSAREAHPDVGPSHPHTLRTILLIAEIHHASGDDALARIVL
HHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
DEVHPKIAALDLAEGHNWLTTMNALDAALAAGSGQPEKGLRNR
HHHCCHHEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MIDWTIAVLEGYRDMGNTGQVAFVATILAPLLAVYGIMRLLARRGYETSQAMEAKLKIAR
CCCEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
NDAANLEKDKTALERENAILSARLPEAFIERLDAHIAQGNEDPATRDVYELLGEFGPALT
CCCCCCHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCHHHH
AAFDHLAREEAKNVATTEDARAQAMFYRLARDNARIALALTPDHAEMAGLEEELAVATAA
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCHHHHHHHHHH
AEQGLKVIPTDDAIRELRWKSRGDQERSVPVLLAVWDRNRKRGTYHLALAAAKEARRLAS
HHCCCEEECCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEEHHHHHHHHHHHHH
RGGAELCRDALFAAHAMADSQLRLGAYGASLSLAEATAQQQTNAFGAGDPNTLSTRYLIA
CCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
NILTQKGDYDAALLEAKAVRSAREAHPDVGPSHPHTLRTILLIAEIHHASGDDALARIVL
HHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
DEVHPKIAALDLAEGHNWLTTMNALDAALAAGSGQPEKGLRNR
HHHCCHHEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA