| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054694
Identifier: 89054694
GI number: 89054694
Start: 2212681
End: 2213097
Strand: Direct
Name: 89054694
Synonym: Jann_2203
Alternate gene names: NA
Gene position: 2212681-2213097 (Clockwise)
Preceding gene: 89054690
Following gene: 89054695
Centisome position: 51.24
GC content: 58.51
Gene sequence:
>417_bases ATGGGTGATGTAAGGCAATTGCGGGACAAGCAGCCGGAGAACGAGAAGATCACAATCAATCTGGGCTTCGTTGACCTTGG GCGGATCGACCTGATGGTGCAGGAGGGGTTCTATTCGAACCGGAGCGATCTGATCCGCACGGCGATCCGCAATCAACTGG ACACGCATACCGGCGTGGTCGATCAGACGCTTGAGCGGCACACGATGGAATTGGGACTGCGCGACTATACGGTCGCGGAT CTCGAAGCGCTCAGAGATGCGGGCGAGGTGCTGCACGTGAAGGTCGTGGGGCTGGCGCGGATCAGCGCGGAAGTGACCCC GGAACTGGCGCTGCAAACCATTGGATCGATCACCGTTTTGGGCGCTTTGCAGGCCAATAAAGATGTCAAGACGGCGCTCG CCGACCGCATTAAGTAA
Upstream 100 bases:
>100_bases AATATGTCTGCTGAGGGTACGTGGGGGCGGACGTGGTCAAAAAGGTATTGCGAACATCCGAAAAGCATCCATATAACATC CACATGGATGGAGATGAAAT
Downstream 100 bases:
>100_bases GATGCGCAACCCTTTATAAGGAATAGATAAATGAAGCTCTTTAACGTAGGCGCGATGCGCCCTGCGACCGATGAGGCGCG TCTGTCGCGCGCCAATGAAC
Product: CopG family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator CopG Family; Transcriptional Regulator; Transcriptional Regulator CopG/Arc/MetJ Family; Transcription Regulator; CopG/Arc/MetJ Family Transcriptional Regulator; CopG/Arc/MetJ Family Transcriptional Regulator
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MGDVRQLRDKQPENEKITINLGFVDLGRIDLMVQEGFYSNRSDLIRTAIRNQLDTHTGVVDQTLERHTMELGLRDYTVAD LEALRDAGEVLHVKVVGLARISAEVTPELALQTIGSITVLGALQANKDVKTALADRIK
Sequences:
>Translated_138_residues MGDVRQLRDKQPENEKITINLGFVDLGRIDLMVQEGFYSNRSDLIRTAIRNQLDTHTGVVDQTLERHTMELGLRDYTVAD LEALRDAGEVLHVKVVGLARISAEVTPELALQTIGSITVLGALQANKDVKTALADRIK >Mature_137_residues GDVRQLRDKQPENEKITINLGFVDLGRIDLMVQEGFYSNRSDLIRTAIRNQLDTHTGVVDQTLERHTMELGLRDYTVADL EALRDAGEVLHVKVVGLARISAEVTPELALQTIGSITVLGALQANKDVKTALADRIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15293; Mature: 15162
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDVRQLRDKQPENEKITINLGFVDLGRIDLMVQEGFYSNRSDLIRTAIRNQLDTHTGVV CCCHHHHHCCCCCCCEEEEEECEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCHH DQTLERHTMELGLRDYTVADLEALRDAGEVLHVKVVGLARISAEVTPELALQTIGSITVL HHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEEHHHHHHHHCCHHHHHHHHHHHHEE GALQANKDVKTALADRIK EHHHCCCHHHHHHHHCCC >Mature Secondary Structure GDVRQLRDKQPENEKITINLGFVDLGRIDLMVQEGFYSNRSDLIRTAIRNQLDTHTGVV CCHHHHHCCCCCCCEEEEEECEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCHH DQTLERHTMELGLRDYTVADLEALRDAGEVLHVKVVGLARISAEVTPELALQTIGSITVL HHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEEHHHHHHHHCCHHHHHHHHHHHHEE GALQANKDVKTALADRIK EHHHCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA