Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054682

Identifier: 89054682

GI number: 89054682

Start: 2197269

End: 2197661

Strand: Direct

Name: 89054682

Synonym: Jann_2191

Alternate gene names: NA

Gene position: 2197269-2197661 (Clockwise)

Preceding gene: 89054680

Following gene: 89054684

Centisome position: 50.89

GC content: 63.36

Gene sequence:

>393_bases
ATGGCGCCCCCCAAACCCTCCCCGCAGCGCACACATGATCCTGACGTCGTGGTCGACATCCGGTGGCGGGACGCTGTCTT
TTACCTGGTCCTGCACAACATCGCGCCCCATTGCGTCCACGACGTGCGCGTGGCGTTCCGCCCGAAGATCATGGGGATGG
GCGGACGGGTCGACATCTCTGGTCTGCCGATCTGGGACGATTTGGCGATCCTGCCGCCGGGCCGCGAGATCGAGGTTGCC
GTGGACCGCGATGGGACGTTCTTCCTGCACAATCCCGAGGGGCCTGTCGGTGTTTCGGTGCGCTATGCGCTTGGCGATGG
CACGGCATTAAGGGGCTTTCAGACGATCAATTTTGGCGCCTACCGCGAGTTTCCCGATCTGCGCATCACCTGA

Upstream 100 bases:

>100_bases
TCGATTGGCTCCTGAAGAAGGGTCCCGCAGCAATGGTAGTGCATGCTAGGCTAGCACAGATTTCGTGTCGCAAGAGGGAT
TTTCTGTTAGGCTTTCGTCC

Downstream 100 bases:

>100_bases
GCGCGGCGAGGACACCCGTCAGGGTGGAGGAGCGGGCGCGGGATCAGGCGCGCAGCGCCGCCATAAGCTGTGGCACATCG
TCGACGGCCTGGATGAACTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MAPPKPSPQRTHDPDVVVDIRWRDAVFYLVLHNIAPHCVHDVRVAFRPKIMGMGGRVDISGLPIWDDLAILPPGREIEVA
VDRDGTFFLHNPEGPVGVSVRYALGDGTALRGFQTINFGAYREFPDLRIT

Sequences:

>Translated_130_residues
MAPPKPSPQRTHDPDVVVDIRWRDAVFYLVLHNIAPHCVHDVRVAFRPKIMGMGGRVDISGLPIWDDLAILPPGREIEVA
VDRDGTFFLHNPEGPVGVSVRYALGDGTALRGFQTINFGAYREFPDLRIT
>Mature_129_residues
APPKPSPQRTHDPDVVVDIRWRDAVFYLVLHNIAPHCVHDVRVAFRPKIMGMGGRVDISGLPIWDDLAILPPGREIEVAV
DRDGTFFLHNPEGPVGVSVRYALGDGTALRGFQTINFGAYREFPDLRIT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14498; Mature: 14367

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPPKPSPQRTHDPDVVVDIRWRDAVFYLVLHNIAPHCVHDVRVAFRPKIMGMGGRVDIS
CCCCCCCCCCCCCCCEEEEEEECCEEEEEEHHCCCCHHHHHEEEEECCEEECCCCEEEEC
GLPIWDDLAILPPGREIEVAVDRDGTFFLHNPEGPVGVSVRYALGDGTALRGFQTINFGA
CCCCCCCEEECCCCCEEEEEEECCCEEEEECCCCCEEEEEEEEECCCCEECCEEEECCCC
YREFPDLRIT
CCCCCCEEEC
>Mature Secondary Structure 
APPKPSPQRTHDPDVVVDIRWRDAVFYLVLHNIAPHCVHDVRVAFRPKIMGMGGRVDIS
CCCCCCCCCCCCCCEEEEEEECCEEEEEEHHCCCCHHHHHEEEEECCEEECCCCEEEEC
GLPIWDDLAILPPGREIEVAVDRDGTFFLHNPEGPVGVSVRYALGDGTALRGFQTINFGA
CCCCCCCEEECCCCCEEEEEEECCCEEEEECCCCCEEEEEEEEECCCCEECCEEEECCCC
YREFPDLRIT
CCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA