Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054679

Identifier: 89054679

GI number: 89054679

Start: 2195387

End: 2195767

Strand: Direct

Name: 89054679

Synonym: Jann_2188

Alternate gene names: NA

Gene position: 2195387-2195767 (Clockwise)

Preceding gene: 89054678

Following gene: 89054680

Centisome position: 50.84

GC content: 60.1

Gene sequence:

>381_bases
ATGCGTTTTCTTCGCTTCGCCGGATTGGCGACCTCTTTGTGTCTGGGGGCATTTGCCGCCCATGCTGAATCCTACGCCTG
CCAAATGACGACCATGGGGCAGTCCGGCGGTTGGGTGCCGGAGCAGTTCCAAGTCACCCTATCGGGGCAGGAGGCGATGA
TTTTCACGCCCCGGGGTGATATTGCGGGCCGGATCGCCCGTTACAATGCCTCCGGATTTTCTGTCGTCGCCTCTCAGCAG
ATCTCGAATGCGGGGCAGCACGGGACCTTGAATTACCGTCTGACCTATAATTCCCGGACCAACGTGGCACGGGTCCGGGT
GACGCCCTTGGGCTATGCAAACAACTTCTCTGCGCGCGGTAGCTGCGTCCGTCAGAGCTGA

Upstream 100 bases:

>100_bases
TGCACGCGGCGACCCGTTCGACCATGCTGACCGGCCAGTCTTGAAGACGCTGACGGGGCAGACTACACCGTCCAGGCACG
CTTAAAACAAGGTATCTGTC

Downstream 100 bases:

>100_bases
GCCCGGCCATGCGGCGCGCGGGGCTGCAAACGCCGTCCCGTCGCCCCACGTTCAGACCGCGTGAAGGTGCGAAAGAGCCG
CGCCACCCCTTGACGTTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MRFLRFAGLATSLCLGAFAAHAESYACQMTTMGQSGGWVPEQFQVTLSGQEAMIFTPRGDIAGRIARYNASGFSVVASQQ
ISNAGQHGTLNYRLTYNSRTNVARVRVTPLGYANNFSARGSCVRQS

Sequences:

>Translated_126_residues
MRFLRFAGLATSLCLGAFAAHAESYACQMTTMGQSGGWVPEQFQVTLSGQEAMIFTPRGDIAGRIARYNASGFSVVASQQ
ISNAGQHGTLNYRLTYNSRTNVARVRVTPLGYANNFSARGSCVRQS
>Mature_126_residues
MRFLRFAGLATSLCLGAFAAHAESYACQMTTMGQSGGWVPEQFQVTLSGQEAMIFTPRGDIAGRIARYNASGFSVVASQQ
ISNAGQHGTLNYRLTYNSRTNVARVRVTPLGYANNFSARGSCVRQS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13608; Mature: 13608

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFLRFAGLATSLCLGAFAAHAESYACQMTTMGQSGGWVPEQFQVTLSGQEAMIFTPRGD
CCEEHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCEEEEEECCCEEEEEECCCC
IAGRIARYNASGFSVVASQQISNAGQHGTLNYRLTYNSRTNVARVRVTPLGYANNFSARG
CCCEEEEECCCCEEEEEEHHHCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCCCC
SCVRQS
EEECCC
>Mature Secondary Structure
MRFLRFAGLATSLCLGAFAAHAESYACQMTTMGQSGGWVPEQFQVTLSGQEAMIFTPRGD
CCEEHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCEEEEEECCCEEEEEECCCC
IAGRIARYNASGFSVVASQQISNAGQHGTLNYRLTYNSRTNVARVRVTPLGYANNFSARG
CCCEEEEECCCCEEEEEEHHHCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCCCC
SCVRQS
EEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA