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The map label for this gene is 89054678

Identifier: 89054678

GI number: 89054678

Start: 2194815

End: 2195330

Strand: Direct

Name: 89054678

Synonym: Jann_2187

Alternate gene names: NA

Gene position: 2194815-2195330 (Clockwise)

Preceding gene: 89054677

Following gene: 89054679

Centisome position: 50.83

GC content: 65.5

Gene sequence:

>516_bases
ATGTCTGACGTATCCGTTTCGCAGGACGGCCCGAGAGGCATGATCACCCTGAAGGGCGATTTGGCGGACCTGAGCTCTGC
TGTCACGTCCGCCACGGGCTGCGCGATGCCGGGTCGGCGCGCCATGACCCAGGCCCAGGGCCGCGCGGTGGCGTGGATGG
CCCCGGATGAGGTGTTGATCCTGTGTGACCACGCGGAGGTCGGCAACCTGGTGATGCAGCTGTCCGACGCCTTGGTGGAC
CAGACTCATCTTGCGGTGGATGTGTCGGACGCGCGGGCGCTCTTCACGCTGGACGGTCCCGGCGCGCGAGAGGTTCTTGC
ACGTCTTTCGCCGACCGATCAGCGTGGGCTGGAGCCCGGAGAGATGCGCCGCACGCGCATGGCGCAGGTGCCCGCTGCGG
TCTGGTTCAATTCCTCAACGCAGGCACAGGTGATCTGCTTCAGGTCTGTTGCGACATACATGCATGACATCCTGCACGCG
GCGACCCGTTCGACCATGCTGACCGGCCAGTCTTGA

Upstream 100 bases:

>100_bases
CGGATGGGAGAGACTGTTCAGTTCAACAAGGTGGATGGATCGACTGTGGCCGCCAAAATCGTGAACCCGGTGTTCTTTGA
CCCGGACGGGGAGAAGCAGA

Downstream 100 bases:

>100_bases
AGACGCTGACGGGGCAGACTACACCGTCCAGGCACGCTTAAAACAAGGTATCTGTCATGCGTTTTCTTCGCTTCGCCGGA
TTGGCGACCTCTTTGTGTCT

Product: sarcosine oxidase subunit gamma

Products: NA

Alternate protein names: Sarcosine Oxidase Gamma Subunit Family; Sarcosine Oxidase Gamma Subunit Family Protein; Sarcosine Oxidase Subunit Gamma

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MSDVSVSQDGPRGMITLKGDLADLSSAVTSATGCAMPGRRAMTQAQGRAVAWMAPDEVLILCDHAEVGNLVMQLSDALVD
QTHLAVDVSDARALFTLDGPGAREVLARLSPTDQRGLEPGEMRRTRMAQVPAAVWFNSSTQAQVICFRSVATYMHDILHA
ATRSTMLTGQS

Sequences:

>Translated_171_residues
MSDVSVSQDGPRGMITLKGDLADLSSAVTSATGCAMPGRRAMTQAQGRAVAWMAPDEVLILCDHAEVGNLVMQLSDALVD
QTHLAVDVSDARALFTLDGPGAREVLARLSPTDQRGLEPGEMRRTRMAQVPAAVWFNSSTQAQVICFRSVATYMHDILHA
ATRSTMLTGQS
>Mature_170_residues
SDVSVSQDGPRGMITLKGDLADLSSAVTSATGCAMPGRRAMTQAQGRAVAWMAPDEVLILCDHAEVGNLVMQLSDALVDQ
THLAVDVSDARALFTLDGPGAREVLARLSPTDQRGLEPGEMRRTRMAQVPAAVWFNSSTQAQVICFRSVATYMHDILHAA
TRSTMLTGQS

Specific function: Unknown

COG id: COG4583

COG function: function code E; Sarcosine oxidase gamma subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18258; Mature: 18127

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDVSVSQDGPRGMITLKGDLADLSSAVTSATGCAMPGRRAMTQAQGRAVAWMAPDEVLI
CCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEECCCCEEE
LCDHAEVGNLVMQLSDALVDQTHLAVDVSDARALFTLDGPGAREVLARLSPTDQRGLEPG
EECCCHHHHHHHHHHHHHHCCHHEEEEECCCEEEEEECCCCHHHHHHHCCCCHHHCCCCH
EMRRTRMAQVPAAVWFNSSTQAQVICFRSVATYMHDILHAATRSTMLTGQS
HHHHHHHHHCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHEECCCC
>Mature Secondary Structure 
SDVSVSQDGPRGMITLKGDLADLSSAVTSATGCAMPGRRAMTQAQGRAVAWMAPDEVLI
CCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEECCCCEEE
LCDHAEVGNLVMQLSDALVDQTHLAVDVSDARALFTLDGPGAREVLARLSPTDQRGLEPG
EECCCHHHHHHHHHHHHHHCCHHEEEEECCCEEEEEECCCCHHHHHHHCCCCHHHCCCCH
EMRRTRMAQVPAAVWFNSSTQAQVICFRSVATYMHDILHAATRSTMLTGQS
HHHHHHHHHCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA