Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is yaiI [C]

Identifier: 89054659

GI number: 89054659

Start: 2174407

End: 2174877

Strand: Direct

Name: yaiI [C]

Synonym: Jann_2168

Alternate gene names: 89054659

Gene position: 2174407-2174877 (Clockwise)

Preceding gene: 89054658

Following gene: 89054660

Centisome position: 50.36

GC content: 67.3

Gene sequence:

>471_bases
TTGACTGACGAGACACGTCAAGGGCGGCTGATCCTGATCGACGGCGACGCCTGCCCGGTGAAGGAGGAAATCTACACCTG
CGCCTATCGCCACAAGATCCCCGTGCGCCTGGTCGCGGCCAGCTACCTGCGCCACCCCGATCATCCGCTGATCACCATGG
TGATGGCGGGCGATGCGTTCGATGCCGCCGATGATGTGATTGCGGAGGCCGCGGCCCCCGGCACGCTGGTCGTCACGGGT
GACATCCTGCTGGCGGAGCGGTGCCTGGAGGCGGGGTCAGTCGTGTTGAACCACAAGGGCGGGGCCTATACCGCGAACTC
CATCGGGGCGCAGGTGGCGACGCGTGCGATCATGGCGGATATCCGCGCCGGCCTGGACGGGCAGGGCATCGGCGGGCAGA
AGCCGTTCTCCAAGGCGGACCGGTCGGCCTTCTCCAACGCGCTGGAGACGGCGCTGCGGCGCTTGAAATAG

Upstream 100 bases:

>100_bases
GGCTGGTCGGAGATGACGTCGATCACATTGCAGGGTGGAAAGCTGCACCTGCGCGAGGTCGGGGGCGGCACAATGGTCAT
TCCATTCCCGGAGGGGCATT

Downstream 100 bases:

>100_bases
GGACAAAAGGGGCGTAGGTGCGCCTCTTCTGTTTAAGGTGCCTGCCCATGTCCTTCACGCTTGCCATCGTTGGCCGCCCC
AATGTGGGCAAATCCACGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MTDETRQGRLILIDGDACPVKEEIYTCAYRHKIPVRLVAASYLRHPDHPLITMVMAGDAFDAADDVIAEAAAPGTLVVTG
DILLAERCLEAGSVVLNHKGGAYTANSIGAQVATRAIMADIRAGLDGQGIGGQKPFSKADRSAFSNALETALRRLK

Sequences:

>Translated_156_residues
MTDETRQGRLILIDGDACPVKEEIYTCAYRHKIPVRLVAASYLRHPDHPLITMVMAGDAFDAADDVIAEAAAPGTLVVTG
DILLAERCLEAGSVVLNHKGGAYTANSIGAQVATRAIMADIRAGLDGQGIGGQKPFSKADRSAFSNALETALRRLK
>Mature_155_residues
TDETRQGRLILIDGDACPVKEEIYTCAYRHKIPVRLVAASYLRHPDHPLITMVMAGDAFDAADDVIAEAAAPGTLVVTGD
ILLAERCLEAGSVVLNHKGGAYTANSIGAQVATRAIMADIRAGLDGQGIGGQKPFSKADRSAFSNALETALRRLK

Specific function: Unknown

COG id: COG1671

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0178 family

Homologues:

Organism=Escherichia coli, GI87081732, Length=141, Percent_Identity=38.2978723404255, Blast_Score=90, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2168_JANSC (Q28QC7)

Other databases:

- EMBL:   CP000264
- RefSeq:   YP_510110.1
- STRING:   Q28QC7
- GeneID:   3934622
- GenomeReviews:   CP000264_GR
- KEGG:   jan:Jann_2168
- eggNOG:   COG1671
- HOGENOM:   HBG363074
- OMA:   PLASRCV
- PhylomeDB:   Q28QC7
- BioCyc:   JSP290400:JANN_2168-MONOMER
- HAMAP:   MF_00489
- InterPro:   IPR003791

Pfam domain/function: PF02639 DUF188

EC number: NA

Molecular weight: Translated: 16533; Mature: 16402

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDETRQGRLILIDGDACPVKEEIYTCAYRHKIPVRLVAASYLRHPDHPLITMVMAGDAF
CCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEECCCC
DAADDVIAEAAAPGTLVVTGDILLAERCLEAGSVVLNHKGGAYTANSIGAQVATRAIMAD
CHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCCEEEECCCCCEEHHHHHHHHHHHHHHHH
IRAGLDGQGIGGQKPFSKADRSAFSNALETALRRLK
HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TDETRQGRLILIDGDACPVKEEIYTCAYRHKIPVRLVAASYLRHPDHPLITMVMAGDAF
CCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEECCCC
DAADDVIAEAAAPGTLVVTGDILLAERCLEAGSVVLNHKGGAYTANSIGAQVATRAIMAD
CHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCCEEEECCCCCEEHHHHHHHHHHHHHHHH
IRAGLDGQGIGGQKPFSKADRSAFSNALETALRRLK
HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA