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The map label for this gene is sgcX [H]

Identifier: 89054604

GI number: 89054604

Start: 2121077

End: 2122147

Strand: Direct

Name: sgcX [H]

Synonym: Jann_2113

Alternate gene names: 89054604

Gene position: 2121077-2122147 (Clockwise)

Preceding gene: 89054603

Following gene: 89054605

Centisome position: 49.12

GC content: 63.87

Gene sequence:

>1071_bases
ATGATCGCCGACGACCTGAAAGCGCTGATGATGATCCCCGGCCTCTCCGGGCACGAGGGGCGGGTGGCGGCAGCAATTGC
AGCACGGATGCCGGTGGAATGCCGCACGGATACGATGGGCAATCTGATCGCGACCTTTCCAGGCCAGGGCCCATCGGTCA
TGCTGTTCACCCATATGGATCAGCTTGGCCTGATCGTGCGCAAGATCGACGACGACGGCTTGATCCGTGTGCATCGCATG
GGCGGTGTTCCCGAACGGGCCCTTCCGTCGCAATCGGTGGTGCTCAGCACCCCGGACGGACGCGACATATCGGGGGTCTT
GGCGAACAAAAGCCACCATGCAACCGGGCCGGATGAGAAATATACCGTGCTGAAGGCGGCAGACCTGTTCATCGACACCG
GGCACGGGTCGAAGGCGGCGGTGGAAGCGGCGGGGATCAGGATCGGCACGCCGGTGACCTATGCACCGAACGTTGTGGAC
CTGGAGGGGGGCCGCATTGCTGGAACCTCGGTCGATGACCGTGCGGGCTGTGCCGTGTTGCTGGATGTGGCCGCCGCGTT
GGCCAGACGTGACGGCGGCCCGCCCGTGCATGTGGTGTTTTCCACCCAGGAGGAATTCAATCTGCGCGGCGCGGTTGTTG
CGGCGCAGGCGCTTCAGCCTGATATCGCGATCCAGATCGACCTGATGCTAGCCTGCGACACGCCGGATATGGCCGGTCAG
GGGGAGATGGCACTCGGGGAAGGCCCGGGAATGAGCCTCTACAGCTTTCATGGCAGGGGCACGTTGAATGGCGTCTTGCC
GCATCCCGCGCTGGTCGCTCTGTTCGATGAAACGGCGTCGTCTGAGGACATGGCCTTGCAGCGGTCGGCCCAGATCGGGG
TGCTGACGGACCTGTCCTACGTGCAATCGGTGGGCCACGGCGTGGCGTCCATCGATCTGGGCTTCCCGATGCGCTATTCC
CATTCCTCCCTTGAGATGTGTCAGATCAGCGATCTGGAGGCTTTGTCGCGGTTGCTGGTCGCGGGGCTGGCCCGGATCGG
CCCGGATTTTCCACTGGAGCGATGGGCGTGA

Upstream 100 bases:

>100_bases
GCTGTATCGTCGGCTCGTCCCTCAAGGTCGACGGGCATACCTGGAACGCGGTCGACCCGGACCGGGCAAAGGACTTCATG
GACAGGGCAAGGGCCAGCCG

Downstream 100 bases:

>100_bases
GCTATACCCTTGGCGTTGATATCGGCACCTACGAGACCAAGGGCGTGTTGGTGGATGCCGCCGGTTGCGTGGTTGCCATG
GCCACCGCAGCCCATGACAT

Product: peptidase M42

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MIADDLKALMMIPGLSGHEGRVAAAIAARMPVECRTDTMGNLIATFPGQGPSVMLFTHMDQLGLIVRKIDDDGLIRVHRM
GGVPERALPSQSVVLSTPDGRDISGVLANKSHHATGPDEKYTVLKAADLFIDTGHGSKAAVEAAGIRIGTPVTYAPNVVD
LEGGRIAGTSVDDRAGCAVLLDVAAALARRDGGPPVHVVFSTQEEFNLRGAVVAAQALQPDIAIQIDLMLACDTPDMAGQ
GEMALGEGPGMSLYSFHGRGTLNGVLPHPALVALFDETASSEDMALQRSAQIGVLTDLSYVQSVGHGVASIDLGFPMRYS
HSSLEMCQISDLEALSRLLVAGLARIGPDFPLERWA

Sequences:

>Translated_356_residues
MIADDLKALMMIPGLSGHEGRVAAAIAARMPVECRTDTMGNLIATFPGQGPSVMLFTHMDQLGLIVRKIDDDGLIRVHRM
GGVPERALPSQSVVLSTPDGRDISGVLANKSHHATGPDEKYTVLKAADLFIDTGHGSKAAVEAAGIRIGTPVTYAPNVVD
LEGGRIAGTSVDDRAGCAVLLDVAAALARRDGGPPVHVVFSTQEEFNLRGAVVAAQALQPDIAIQIDLMLACDTPDMAGQ
GEMALGEGPGMSLYSFHGRGTLNGVLPHPALVALFDETASSEDMALQRSAQIGVLTDLSYVQSVGHGVASIDLGFPMRYS
HSSLEMCQISDLEALSRLLVAGLARIGPDFPLERWA
>Mature_356_residues
MIADDLKALMMIPGLSGHEGRVAAAIAARMPVECRTDTMGNLIATFPGQGPSVMLFTHMDQLGLIVRKIDDDGLIRVHRM
GGVPERALPSQSVVLSTPDGRDISGVLANKSHHATGPDEKYTVLKAADLFIDTGHGSKAAVEAAGIRIGTPVTYAPNVVD
LEGGRIAGTSVDDRAGCAVLLDVAAALARRDGGPPVHVVFSTQEEFNLRGAVVAAQALQPDIAIQIDLMLACDTPDMAGQ
GEMALGEGPGMSLYSFHGRGTLNGVLPHPALVALFDETASSEDMALQRSAQIGVLTDLSYVQSVGHGVASIDLGFPMRYS
HSSLEMCQISDLEALSRLLVAGLARIGPDFPLERWA

Specific function: Unknown

COG id: COG1363

COG function: function code G; Cellulase M and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M42 family [H]

Homologues:

Organism=Escherichia coli, GI87082417, Length=359, Percent_Identity=35.0974930362117, Blast_Score=213, Evalue=1e-56,
Organism=Escherichia coli, GI1790332, Length=310, Percent_Identity=30.3225806451613, Blast_Score=143, Evalue=1e-35,
Organism=Escherichia coli, GI1788727, Length=345, Percent_Identity=28.9855072463768, Blast_Score=107, Evalue=9e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008007 [H]

Pfam domain/function: PF05343 Peptidase_M42 [H]

EC number: NA

Molecular weight: Translated: 37391; Mature: 37391

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIADDLKALMMIPGLSGHEGRVAAAIAARMPVECRTDTMGNLIATFPGQGPSVMLFTHMD
CCCHHHHHHHHCCCCCCCCCCEEEEHHHHCCCEECCCCCCCEEEECCCCCCCEEEEECCC
QLGLIVRKIDDDGLIRVHRMGGVPERALPSQSVVLSTPDGRDISGVLANKSHHATGPDEK
HHCEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCC
YTVLKAADLFIDTGHGSKAAVEAAGIRIGTPVTYAPNVVDLEGGRIAGTSVDDRAGCAVL
EEEEEEEEEEEECCCCCCEEEEECCEEECCCCEECCCEEECCCCEEECCCCCCCCCHHHH
LDVAAALARRDGGPPVHVVFSTQEEFNLRGAVVAAQALQPDIAIQIDLMLACDTPDMAGQ
HHHHHHHHHCCCCCEEEEEEECCHHCCCCHHEEEHHHCCCCEEEEEEEEEEECCCCCCCC
GEMALGEGPGMSLYSFHGRGTLNGVLPHPALVALFDETASSEDMALQRSAQIGVLTDLSY
CCEEECCCCCCEEEEECCCCEECCCCCCCEEEEEECCCCCCCHHHHHHCCCEEEEEHHHH
VQSVGHGVASIDLGFPMRYSHSSLEMCQISDLEALSRLLVAGLARIGPDFPLERWA
HHHHCCCEEEEECCCCCEECCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCHHCCC
>Mature Secondary Structure
MIADDLKALMMIPGLSGHEGRVAAAIAARMPVECRTDTMGNLIATFPGQGPSVMLFTHMD
CCCHHHHHHHHCCCCCCCCCCEEEEHHHHCCCEECCCCCCCEEEECCCCCCCEEEEECCC
QLGLIVRKIDDDGLIRVHRMGGVPERALPSQSVVLSTPDGRDISGVLANKSHHATGPDEK
HHCEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCC
YTVLKAADLFIDTGHGSKAAVEAAGIRIGTPVTYAPNVVDLEGGRIAGTSVDDRAGCAVL
EEEEEEEEEEEECCCCCCEEEEECCEEECCCCEECCCEEECCCCEEECCCCCCCCCHHHH
LDVAAALARRDGGPPVHVVFSTQEEFNLRGAVVAAQALQPDIAIQIDLMLACDTPDMAGQ
HHHHHHHHHCCCCCEEEEEEECCHHCCCCHHEEEHHHCCCCEEEEEEEEEEECCCCCCCC
GEMALGEGPGMSLYSFHGRGTLNGVLPHPALVALFDETASSEDMALQRSAQIGVLTDLSY
CCEEECCCCCCEEEEECCCCEECCCCCCCEEEEEECCCCCCCHHHHHHCCCEEEEEHHHH
VQSVGHGVASIDLGFPMRYSHSSLEMCQISDLEALSRLLVAGLARIGPDFPLERWA
HHHHCCCEEEEECCCCCEECCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]