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The map label for this gene is sgcQ [H]

Identifier: 89054603

GI number: 89054603

Start: 2120277

End: 2121080

Strand: Direct

Name: sgcQ [H]

Synonym: Jann_2112

Alternate gene names: 89054603

Gene position: 2120277-2121080 (Clockwise)

Preceding gene: 89054600

Following gene: 89054604

Centisome position: 49.1

GC content: 63.93

Gene sequence:

>804_bases
ATGCAGAAATTCAGGGACGTGTTCGGCACGCCAAAACCGGTGATTGCGATGGTGCATCTTGGCGCCATGCCCGGCACGCC
GTTGCACGACGCGGATGCCGGGTTGGAGGGGTTGGTCGCTGCCGCCGCCGCAGATCTGTCCGCCTTGCAGGCCGCCGGTG
TTGATGCGGTGATGTTCGGCAATGAGAATGATCGCCCCTATGAATTCGCCGTCGATACCGCCAGCACCGCCACCATGGCC
TATGTCATCGGTCAATTGCGCGGGCAGATCACCGTGCCCTTTGGCGTGAATGTTCTGTGGGATCCCGACAGCACCATCGC
CCTGGCCGCAGCCACCGGGGCCCAGTTCTGTCGGGAGATCTTTACCGGCACCTATGCCAGTGACATGGGCGTCTGGGCGC
CTGATGCGGGCCGGGCGCTGCGCTATCGCAAGCGGTTGGGGCGGGACGATCTGGCGATGCTCTATAACGTCAGCGCGGAA
TTTGCGGACAGTCTGGACAAGCGGCCACTGCCGGATCGCGCGCGGTCTGCGGTGTTCTCATCCGTGCCCGATGCGGTGTT
GGTGTCGGGCCAGATCACCGGGGAAGCGGCGCGGATGGAGGATCTGGAAGCTGTCAAAGCCGTGCTGCCGGAGACGCCGG
TGCTGGCCAATACCGGTGTCAAACACGACACTGTGGCCGAGGTTTTGCGGATCGCCGATGGCTGTATCGTCGGCTCGTCC
CTCAAGGTCGACGGGCATACCTGGAACGCGGTCGACCCGGACCGGGCAAAGGACTTCATGGACAGGGCAAGGGCCAGCCG
ATGA

Upstream 100 bases:

>100_bases
CAATGCCATGACGATGCCCTCCTGGCTGACATGCTAGAATGAAACCTGCTGGACTGCACCCCCCGTTTCCGGGCAGCATG
GGCCTGAGGGAGACATGATC

Downstream 100 bases:

>100_bases
TCGCCGACGACCTGAAAGCGCTGATGATGATCCCCGGCCTCTCCGGGCACGAGGGGCGGGTGGCGGCAGCAATTGCAGCA
CGGATGCCGGTGGAATGCCG

Product: photosystem I assembly BtpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MQKFRDVFGTPKPVIAMVHLGAMPGTPLHDADAGLEGLVAAAAADLSALQAAGVDAVMFGNENDRPYEFAVDTASTATMA
YVIGQLRGQITVPFGVNVLWDPDSTIALAAATGAQFCREIFTGTYASDMGVWAPDAGRALRYRKRLGRDDLAMLYNVSAE
FADSLDKRPLPDRARSAVFSSVPDAVLVSGQITGEAARMEDLEAVKAVLPETPVLANTGVKHDTVAEVLRIADGCIVGSS
LKVDGHTWNAVDPDRAKDFMDRARASR

Sequences:

>Translated_267_residues
MQKFRDVFGTPKPVIAMVHLGAMPGTPLHDADAGLEGLVAAAAADLSALQAAGVDAVMFGNENDRPYEFAVDTASTATMA
YVIGQLRGQITVPFGVNVLWDPDSTIALAAATGAQFCREIFTGTYASDMGVWAPDAGRALRYRKRLGRDDLAMLYNVSAE
FADSLDKRPLPDRARSAVFSSVPDAVLVSGQITGEAARMEDLEAVKAVLPETPVLANTGVKHDTVAEVLRIADGCIVGSS
LKVDGHTWNAVDPDRAKDFMDRARASR
>Mature_267_residues
MQKFRDVFGTPKPVIAMVHLGAMPGTPLHDADAGLEGLVAAAAADLSALQAAGVDAVMFGNENDRPYEFAVDTASTATMA
YVIGQLRGQITVPFGVNVLWDPDSTIALAAATGAQFCREIFTGTYASDMGVWAPDAGRALRYRKRLGRDDLAMLYNVSAE
FADSLDKRPLPDRARSAVFSSVPDAVLVSGQITGEAARMEDLEAVKAVLPETPVLANTGVKHDTVAEVLRIADGCIVGSS
LKVDGHTWNAVDPDRAKDFMDRARASR

Specific function: Unknown

COG id: COG0434

COG function: function code R; Predicted TIM-barrel enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BtpA family [H]

Homologues:

Organism=Escherichia coli, GI1790757, Length=267, Percent_Identity=47.1910112359551, Blast_Score=235, Evalue=2e-63,
Organism=Caenorhabditis elegans, GI115532828, Length=259, Percent_Identity=28.957528957529, Blast_Score=78, Evalue=6e-15,
Organism=Drosophila melanogaster, GI24659916, Length=271, Percent_Identity=27.3062730627306, Blast_Score=87, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005137
- InterPro:   IPR011060
- ProDom:   PD011184 [H]

Pfam domain/function: PF03437 BtpA [H]

EC number: NA

Molecular weight: Translated: 28380; Mature: 28380

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKFRDVFGTPKPVIAMVHLGAMPGTPLHDADAGLEGLVAAAAADLSALQAAGVDAVMFG
CCHHHHHHCCCCHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEC
NENDRPYEFAVDTASTATMAYVIGQLRGQITVPFGVNVLWDPDSTIALAAATGAQFCREI
CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEECCCCEEEECCCCCEEEEEHHHHHHHHHH
FTGTYASDMGVWAPDAGRALRYRKRLGRDDLAMLYNVSAEFADSLDKRPLPDRARSAVFS
HCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHH
SVPDAVLVSGQITGEAARMEDLEAVKAVLPETPVLANTGVKHDTVAEVLRIADGCIVGSS
HCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCEEECCE
LKVDGHTWNAVDPDRAKDFMDRARASR
EEECCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQKFRDVFGTPKPVIAMVHLGAMPGTPLHDADAGLEGLVAAAAADLSALQAAGVDAVMFG
CCHHHHHHCCCCHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEC
NENDRPYEFAVDTASTATMAYVIGQLRGQITVPFGVNVLWDPDSTIALAAATGAQFCREI
CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEECCCCEEEECCCCCEEEEEHHHHHHHHHH
FTGTYASDMGVWAPDAGRALRYRKRLGRDDLAMLYNVSAEFADSLDKRPLPDRARSAVFS
HCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHH
SVPDAVLVSGQITGEAARMEDLEAVKAVLPETPVLANTGVKHDTVAEVLRIADGCIVGSS
HCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCEEECCE
LKVDGHTWNAVDPDRAKDFMDRARASR
EEECCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]